KEGG   Pungitius pungitius (ninespine stickleback): 119209165
Entry
119209165         CDS       T07626                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    119209165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppug03400]
    119209165
DNA repair and recombination proteins [BR:ppug03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     119209165
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_RIG_2nd WD_LRWD1 Beta-prop_IP5PC_F Beta-prop_Vps41 WDR54 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 RAWUL WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 119209165
NCBI-ProteinID: XP_037314150
LinkDB
Position
15:13787189..13794095
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVY
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWTLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDKKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVSTTKSSVNKWSLKGMHNFRSSGEYDNDCTTPLTPLCTQPEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAFWDVLKACKGEDLGKVEFEEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALLEFWPRTRIN
PMDEEENEGIHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSANDKPGEQEKEEDMAMLAEEKIELMCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggccacgcatcacaggcaaaatgctgctgggcggagaaaagtacaggtgtcctacgtc
attagggatgaggtggagaagtacaatcggaatggggtgaacgcactgcagctggaccct
gcgttaaaccgcctcttcactgctggaagagactctatcatccggatatggagtgtctac
cagcataaacaggacccgtacattgcctcgatggagcatcataccgactgggttaacgac
atagttctctgttgcaatggcaaaacgctgatttcggcctcatcagatacaacagtcaaa
gtttggaacgcgcataagggcttctgtatgtcaacgttacgaacacacaaggactacgtg
aaagctctggcatacgctaaggacaaggagcttgtggcatcggcaggtctcgaccggcag
atctttctttgggatgtgaacacactaactgcactcaccgcttccaacaacactgtaacc
acctcttcactcagtggtaacaaggactccatctatagtctggctatgaaccagatgggt
acagtcattgtgtctggatccacagaaaaggtcctgagagtgtgggatcctcgaacgtgt
gcgaagctgatgaagctaaaaggtcacacagacaacgtgaagtcgttgctgctgaatcgt
gacggcactcaatgcctgtccggcagctcggacgggaccatccgcctgtggacacttggc
cagcagagatgcatcgccacgtaccgggtgcacgacgaaggggtctgggccctgcaggtc
aacgaggcctttacacacgtctactctggaggccgagacaagaagatctactgcactgac
ctccgtaacccagacatccgtgtgctgatctgcgaagagaaggccccagtgctcaaaatg
gaactggacagatctgctgacccacctccagcaatctgggtctccaccaccaagtcatcc
gttaataaatggtctctaaagggaatgcacaacttccggtcatcaggggagtatgacaac
gactgcaccacccctctgacaccactgtgcactcagccagaacaagtcatcaagggaggc
gcaagtatcatacagtgccacattctgaacgacaagagacacattctcaccaaagacacc
aacaacaacgtggccttctgggatgtcctgaaggcttgcaagggtgaagacttggggaag
gtggagttcgaggaagagattaaaaagcgcttcaagatggtctatgtgccaaactggttc
tctgttgatcttaaaactgggatgctcactatcacattggacgagagcgactgcttcgct
gcctgggtgtctgcaaaggatgctgggttttcaagctctgatggctccgacccaaagcta
aacctaggtggactgctgctccaggctctgctggagttctggcccaggactcgcatcaac
cccatggacgaggaagagaacgaggggatccacgtgaacggagagcaggagaaccgggtg
cagaagggaaacggatatttccaagtgccgccacacacgccagtcatctttggggaagca
ggaggcagaactttattcaggttgctatgtagagattcaggtggagagactgaatcgatg
ctgctgaacgagactgtcccgcagtgggttattgatataactgtagataaaaatatgccc
aagttcaacaaaatcccgttctacctccagccgcattcttcctcgggcgctaaaactctg
aagaaggatcgcctctcggccagtgacatgctccaggtgaggaaggtgatggagcatgtc
tacgagaagatcatcaacctggacaacgagtcgcagaccaccagctcctcggccaacgac
aagccgggggagcaggagaaggaggaggacatggccatgctggcggaggagaagatcgaa
ctaatgtgtcaagaccaggttctggatcctaatatggacctgcgaacagttaaacatttc
atctggaagagcggaggagacttgacgcttcactataggcagaagtccacgtga

DBGET integrated database retrieval system