Pungitius pungitius (ninespine stickleback): 119209215
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Entry
119209215 CDS
T07626
Symbol
lrrcc1
Name
(RefSeq) leucine-rich repeat and coiled-coil domain-containing protein 1
KO
K16475
leucine-rich repeat and coiled-coil domain-containing protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119209215 (lrrcc1)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
119209215 (lrrcc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_9
LRR_6
LRR_NXF1-5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
119209215
NCBI-ProteinID:
XP_037314250
LinkDB
All DBs
Position
15:complement(4956947..4967760)
Genome browser
AA seq
1001 aa
AA seq
DB search
MENKELSLIDQNITSLLDVPLSPTVTSLNLHCNHISGIQGLTSAGNLRHLDLSSNCISKI
EGLSSLTSLRTLNLSCNLITKVEGLNGLVNLTRLNLSYNRINNVTGLLYLHGTEYKLKHL
SLHGNHLDNIDHLLQCLLGLQSLREVTLSQNGSDNAVCRSPGYREIIFQSLPQTSALDGF
DRLGNPSHPGLGSPCDVPGLEDYVDLLLSTDTSHNEAVREDAALTTPRIDEVLTHFRQRI
ASEVITDPGVQVRSTVTDPADPANEQRIRKLEHQVSRLIQKAPDSDKSTRPAHPVIRKAK
RDTDRTSESECDSGKENRRRTRIPKHRNSTTSKTTPKKIKGRRSDSESSKCAEAHRRQAG
GAVGTSSAGTARRAPARAAEASVSMKTTSREEEETYRTIVEERDQERERRWKAEQAVRKL
TEDLKCLQTKVSEEKDLQSMALHTTDRLKDLLLKERSGRSEWQTRVEELEGRCRALTQQL
QQARSSEEQHRTAVRGLEESISHGEALRARQQTEEMKRHQELENKATALKRESDIQRASV
RQYKDKIQQLHELLASREQEHRKQLDLRLQPGGPDFREAMAKEVASVERRHGHKEVELQE
KLAEGRKQYAALEDEFRMALTIEAARFSEVKEACEQMTAELLGLKANLAQTQQREKKSGS
LVQELTVMVKEQKSRITDLIKAKREAVADLKNRLRSLETEVAQDQRLALQLELLKKDKGR
LLSQLTAQESVIDGLRAERRIWGQELAQQGASLSQDRGRLEAKIEVLAAELESQKKRNER
DNDALKIKTKIIDDQTETIRRLKESLQERDNQIRRLSEEAVGAQKRFQQQLEEETAQRSE
LRERLEHLSQRKEELKQQLEDKEAELEEIRRVYSDSSKQWQAKADLLTRLENQVKRMKEN
FDSKERLLLEERDKATEAHKASVEKLRCVDDAFRRQLESGQAAHQAELLRLANEKQKQIE
KANQKVFEVEEEMRHLLEETETTKRIMEEKMRRLTSVLKDF
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaggagctgagtcttattgaccagaatataacaagtttgctagatgtcccc
ctgagtcccactgtaacatccctcaatctacactgcaatcacatctcggggatccagggc
ctgacctcggcggggaacctacggcacttggacctttcctccaattgcatttctaaaatt
gagggtcttagttccctcacttctttgaggacgttgaatttatcctgtaacctaatcaca
aaggttgaaggactaaatggccttgtgaacctaaccagattaaatttgtcctacaatcgg
ataaacaacgtcactggcttgttgtatcttcatggcacggaatacaagctgaagcacctc
agtctccatggcaaccatctggacaacatcgaccacctcctgcagtgcctgcttggattg
caaagtttaagagaggtcactttgagccagaatggcagcgacaacgctgtatgtcggtca
ccgggttacagagagattatttttcagtcgttgcctcagacctctgctctagatggtttc
gacaggctgggaaatccatcacatccaggtttagggagtccctgtgatgtccccggtctg
gaggattatgtggacctcctgctgtcaacggatacgagtcacaacgaagcggttagagaa
gatgctgctctcaccacaccccgcatcgatgaggttctgacccactttcgtcagcggatt
gcctccgaagtgatcacagatccaggtgtacaggtccgctccactgtcaccgatccagca
gacccagcgaatgaacaacgcataaggaaactggagcaccaggtgtcccggctcatccag
aaggcccctgacagtgacaaatccacacgccctgctcatccggtgatacggaaagccaag
agggacactgaccgcacgtcagagagtgagtgtgacagcgggaaggagaacaggaggcgc
accaggatccccaaacatcgtaacagcacaacatcaaagacgacccccaagaagataaag
ggccggaggtctgacagcgagagttcaaagtgtgcggaggcacacaggaggcaggcgggg
ggcgcagtgggtacgtcctcagctgggacggcgaggagagcacctgcgagagctgccgag
gcctcggtcagcatgaaaaccacgtccagagaggaggaggagacgtacaggactattgtg
gaagagcgtgaccaggagagggagaggcgttggaaggctgagcaggctgttaggaaacta
acggaggatctcaagtgcctgcagacaaaggtcagcgaggaaaaagacctgcagagcatg
gccctgcacaccaccgacagactgaaagatttgctgctgaaggagcgatcgggtcgctct
gaatggcagactcgcgttgaggagctggaggggaggtgtcgagccctgacccagcagctg
caacaggcccgcagcagcgaagagcaacacaggactgcagtgcgtgggctggaggagagc
atctcccacggagaggcactcagggctcgccagcagactgaggagatgaagcggcaccag
gagctggagaacaaggcaacagctctgaagagagagtcggacatacagagagcctcagtg
cgtcagtacaaagacaaaattcagcagttgcatgaactgctcgcctccagagagcaggag
cacaggaaacagctagatttgcggttgcagcctggtgggcctgatttcagagaggcgatg
gcgaaggaggtggcctccgtggagcggaggcacggccacaaggaggtggagctgcaggag
aaactggcagagggccggaaacagtacgccgccctggaggacgagttccgcatggcgctc
accatcgaggctgcccgcttctccgaggtaaaggaggcttgtgagcagatgactgcagag
ttgttgggtctcaaggcaaatctcgctcagacccagcagagggagaagaaatcagggtcc
ctggtgcaggagctcacggtcatggtcaaagaacagaaaagccgcatcactgatctcatc
aaagccaagagagaggccgtcgccgatctgaagaaccgtctgcgttccttggaaacagag
gtggcgcaggaccagcgtctcgctctgcagctggagctgctgaagaaggacaagggtcga
ctgttgtctcagctgacggctcaggagtcggtgatcgatggccttagagcagagaggagg
atctggggacaggagctcgctcaacaaggagcatctttgtctcaggatcgtggccgcctg
gaggcaaagatcgaggtgctggccgctgagctggagtctcaaaagaaacggaacgagagg
gacaacgatgccctcaaaatcaaaaccaaaatcatcgatgaccagacggagaccatccgc
agactcaaagagtccctgcaggagcgcgacaatcagatccgtaggctgagcgaggaggcg
gtcggggcccagaagaggttccagcagcagctggaggaggaaacggctcagcggtctgag
ctgagggagcggctggagcatctgagccagcgcaaggaggagctgaaacaacagctggag
gacaaggaggcggagctggaggagatcagaagagtttacagtgattccagtaagcagtgg
caggcaaaggcagacctgctgactcggctggagaaccaggtgaagcgcatgaaggaaaac
tttgattccaaggaacgtctcctgctggaggaaagagataaagcaacagaagcgcacaaa
gcctcagtggagaagttgcgctgtgtggatgatgcatttcgtcgacagcttgagtctggc
caggccgcccaccaagctgagctgcttcgactggcgaatgagaagcagaaacagattgaa
aaagccaatcagaaggtgtttgaagtggaagaggagatgcgtcacttattggaggagacg
gaaaccaccaagagaatcatggaagagaaaatgagacgtctcacaagtgtactaaaagac
ttttaa
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