Pungitius pungitius (ninespine stickleback): 119209239
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Entry
119209239 CDS
T07626
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04145
Phagosome
ppug04814
Motor proteins
ppug05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119209239
09142 Cell motility
04814 Motor proteins
119209239
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119209239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119209239
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119209239
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
119209239
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
119209239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Nbas_N
Knl1_RWD_C
Motif
Other DBs
NCBI-GeneID:
119209239
NCBI-ProteinID:
XP_037314301
LinkDB
All DBs
Position
15:9583749..9590637
Genome browser
AA seq
650 aa
AA seq
DB search
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDGDSKRGADAAGGSSGGHEDSDLER
KRREAEALLQSVGITPDIHHAQPLRVVTEDTCLFHYLVPAPMSPSNKSVGSDAGSQDSGD
GNAGPRTLHWDPDPSTLQLHSDSELMGRGAVRLGMSKVTQVDFAPKEMVSYSKETQTPTE
AQTHTDPKADEEEDEEIIRPVAEDTQEDKGEHGEQPDEDTPKELTEEEKLQVLHSEEFLS
FFERGSRIVERALAEHVDVCFDYSGRDLEDKEGDLQAGAKLVLNRQFADERWTKNRVVTC
LDWSPQYPELLVASYNNNEDAPHEPDGVALVWNLKYKKSTPEYIFQCQSEVMSAGFAKFH
PNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLISISTD
GKMCSWSLDMLSQPQDSLELVFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACRHGS
KAGITEVFEGHHGPVTGLSCHSAGGPVDFSHLFISSSFDWTVKLWSTKSTRPLYSFEDSC
DYVYDAMWSPTHPALFACVDLAGRLDLWNLNNDTEVPTASVCVEGAPAVNRVRWAHSGKE
IATGDSDGQVQVYDVGEQICVPKADEWTRFVRTLTEINESRDEAEELANV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagagcgagctgaaggctgaactggagcggaagaagcagcggattgcccag
attcgagaggagaagaagagaaaagaggaagagaagaagaagaaggatggagactcgaag
cgaggagctgatgccgctgggggatcctcgggtggtcacgaggactccgacctggagagg
aagaggagggaggcggaggcgctgctgcagagtgtcggcatcacccccgacatccaccat
gctcagcccctgagggtagtaacagaagatacatgtctgtttcactacctagtccccgcc
cccatgtctccctccaacaaatcagtgggcagcgatgcaggaagccaagattccggggat
ggaaacgcaggaccaaggacattgcattgggatcctgacccctctactctgcagctgcac
tccgactctgagctgatgggacgtggagccgtgaggctgggaatgtccaaagtgacccag
gtggattttgccccaaaggaaatggtgtcctattccaaagaaacacagacacccaccgag
gcacagacacacaccgatccaaaagcagatgaggaagaggatgaggagataatccgtcca
gttgcagaggacacccaggaggataaaggcgaacacggtgaacagccagatgaggacacc
ccaaaagagctcacagaggaagagaagctgcaggtcctgcactccgaggagttcctgtcc
ttcttcgaacgaggcagcagaatcgtggagcgagccctcgccgagcatgtggacgtctgc
ttcgactacagcggcagagacctggaagacaaggaaggtgatctgcaagccggcgcaaag
ctggtgctcaacagacaatttgcagatgagcgctggactaaaaaccgagtggtcacctgc
ctggactggtcacctcagtatcccgagctgctggtggcctcgtataacaacaacgaggac
gctccccatgagcccgacggagtggcactagtgtggaacctgaagtacaagaagagcaca
ccagagtacatcttccaatgccagtcagaggtgatgtcagccgggttcgcaaagttccac
cccaacctggtcgtgggcgggacatactccggacagattgtcttgtgggacaacaggagc
aacaagcgcacccctgttcagagaacacccctgtctgcggcggcacacacacacccggtt
tactgtgtgaacgtggtaggaacccaaaacgcaaacaacctgatcagcatttccaccgat
ggcaagatgtgctcctggagcctcgacatgctctcccagccacaggacagcctggagctg
gtattcaaacagagcaaagcggtggccgtcacctccatggccttccccctgggcgacgtc
aacaattttgtggtggggagcgaggacggctcggtctacacagcctgtcgccacgggagc
aaagcggggatcaccgaggtgtttgagggccatcacggtccggtgaccgggctgagctgt
cacagcgccggaggacccgtcgacttctctcatctcttcatctcctcctcttttgactgg
actgtcaagctgtggagcactaagagcacccgtccgttgtactcgtttgaagacagctgc
gactacgtctacgacgccatgtggtccccgacacaccctgctctgtttgcctgtgtggac
ctggccggacgcctggacctgtggaaccttaacaatgatacagaggttcccactgccagc
gtgtgtgtggagggcgcgccagcagtgaaccgcgttaggtgggctcactccggtaaagag
atcgccaccggggactcggacgggcaggtgcaggtctacgacgtaggagagcaaatatgc
gttcccaaggccgacgagtggacgcgcttcgtcaggacgctgacagagatcaacgagagc
cgagacgaagccgaggagctggccaacgtctaa
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