Pungitius pungitius (ninespine stickleback): 119209260
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Entry
119209260 CDS
T07626
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119209260 (chd7)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119209260 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
Chromo_MIT1
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
119209260
NCBI-ProteinID:
XP_037314337
LinkDB
All DBs
Position
15:17951557..18010440
Genome browser
AA seq
3248 aa
AA seq
DB search
MADPGMLSLFGDDAGLFSDGLDGLGDCFPPQPASAQSNPLTQQSNPSLNHELQGNRGYHQ
GMIHNTGAGAGQPKLGQMYDHGPYTGYDQPGATGGRMMAQNGPSQGPPNVNTAMNGMASH
YHSNPANSSNPLHGYQGDAGTGGGGAGVWGQQTQQQQQTRSAYQQPPTQAGAGPTQMGAY
QMSQGNYGGMQGPAAPNAARMNQHYPSQSMVPPPAQDPSHYLGHGMGGAQMRLPQPQAQS
QGYPSMGHTARYPQSPSRQPSIPHQHQQSMGGFGSSRYPGYQAQYGAMGPGMGPGGNVNA
NTSAAMGPGQLGQRFNQVSTPAAGPQVQRYPPGPPHQPQPHSTPMQQAGQQGPPMHPQHP
QSLPQAQNPPQSHLAPPAQGNYPSPSSMSPMRVLGTPTPPPQQGRPPSAGLVGAPEVAGY
VALQSQPNAMVQRPPQIPLSAPQPHNMPPSAGQMYPGLGPQRGPQMGPSRPQLQPGPLEA
AASQGGDQRLLQVPRSGPPMQPTPIGFQGPAVGQHGVPAPTQCLALPPQSTPTQHAHMPP
QPRHLQSTPPLPNQASHPWAPPASHPLSSPPLTPQKVPHVQHSPTDQSDASMMVPDRATV
GAGTTGQPISTEQPSNQVTKPKRKRKKKTKVAAGEDEGGKKAAREEAAAREGEEDAKSDY
LGAGSDAGEHVAGTGTVEASSPPTEEKKKRKKKPKEKVEGNEPKAPKTPKTPKTPKEPKE
KKAKTKTPKKPSSKKVEPEGVSSAAKKDSKRKREPSVSEDVEVKSPPPSPPEEEDDDGVQ
KRRSSRQVKRKRYTEDLEFRISDDDDSGDDSPAPKSPSSQPQDVAEAEGPIVEKIMSKRI
TKKQLELGEEVQVEEFYVKFKGFSYLHCRWADLEELEKDKRIHQKVKRFRAKQQLNSFIT
EMDDEPFNPDYVEVDRVLDISESPDENGETVTLYLVKWCSLLYEDSTWELKADIDQSKIE
EYERIAARTPNTTRVDRPPAADWKQLEGSRDYKNSNALREYQLEGLNWLTFNWYNSRNCI
LADEMGLGKTIQSITFLYEMFMRGIEGPFLVIAPLSTIPNWEREFRTWTELNAVVYHGSQ
ASRKTIQAYEMYYRDTQGKIIKGAYRFHAIITTFEMILTDCPELRSVNWRCVVIDEAHRL
KNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSEQTFMTEFGDLK
TEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFLS
KGGSGGGGGGGGGPNVPNLLNTMMELRKCCNHPYLINGAEEKIAEDFRESHGGRADMPDM
ALQAMVQAAGKLVLIDKLLPKLKAGGHRVLVFSQMVRCLDILEDYLIQKRYPYERIDGRV
RGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARC
HRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDNANSGVQQLSKKEV
EDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTHTITIESEGKGSTFAKASFVAAGNR
TDISLEDPDFWQKWAKKAELDLDAMNGRNTLVIDTPRVRKQTRHFSSAKDDEMLEFSELE
SDEDEPSKPTSKPRRPQDKTQGYPRSECFRVEKNLLVYGWGRWSDILAHGRFKRPLKEPD
VETICRALLAYCLLHYRGDENIKSFIWDLITPSADGTTKTLTNHSGLSTPVPRGRKGKKG
KPAAPPPQTPRADWLASCNPDHLLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGDQAD
RILEGADSSELDIWIPQPFHAEVPADWWETEADKSLLIGVFKHGYEKYNSMRADPALCFL
ERVGMPDAKAIAAEQRGSDMMTDGVEGEDEDPEYKPLRMPFKDEMEDFTNSPLDDKDEHA
DGEVEAKSGENGQGVGGASGSNERLYWPAASALTARLRRLITAYQRSNRREQLRQEALSR
PDGRRRRRRDFLPAIGMVTDASGGGATYIQDAAAVFMTDGGPYLTKGGAYFAKGGQFLPE
ASPVVNASSLMTDGALYYKERRQRWTRREEADFYRVVSTFGVVYDTQRQRFDWAQFRAFA
RLDKKTDESLEKYYYSFIAMCKRVCRMQVKTETELPDPTLIIDPITEERASRTLYRIELL
RRIREQVLPHPLLSERLKLCQSSPDLPEWWENGRHDHDLLLGACKHGVSRTDYHILNDPA
LAFLEAHQRSTGQGAAAQGEITKAGLGLAESNPVPLLTAAEMASAAEAAKVSLIAAKEED
GEEKVKMETEEGDAGDILLVKSERVDEQKGNEECTASPTKEVKKEEEEAMPELKKEEQKV
GQTEDGETSSKPADNQDKGRTEEKTSADSLEDQTETTAELSEHPDSSPIDPPGHKAAEQE
DREEKELPDSPKTPKSAETEKSPEDEDDEDEERMDEDDKSEKSSQAEVSAASEQKNFDED
SIASLSTSARDGFHPDDLPETSALQALHDRSYAFSFWPKDRVMINRMDNICEVVLKGKWP
VNRRHIFDFPGNMLPGQSAAVAAAASTVATVTVSPLQRRSLAELTMAGMHTAYSGSEDKT
LSPQVHEDALSLTAPRQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESHSAAESQSQAID
LTKGMHLHHKAAPSLAGFPSALVTSPSLKAQMELLQQAPPSGHRANGSLEADLPITRRRR
GRRKNVEGLDLLFMGNKRAGGDDTDGTKVSGAEGVKAQRPLSVPEQSPSARSLASGSLEE
DEAAVSNKELGEWLRQHPTYTMDMTGFTPKSDDALLSQFSKPKQKRHRCRNPNKIDINTL
TGEERVPVVNRRNGRKMGGAMAPPMKELPRWLLENPEYSIAPDWTDIVKQSGFLPEAMFD
RLLTGPVVREEGVRRRGRRPKSEIAKAAAAAQASAAAHAAQASAAQSAGGINPLLLNSLF
GGMDLSSLQSLQSLQLAAGLMAFPHPSDPKQAAAAASMLPLMLPGMGGMPNMAALPNMFS
LGGLFGGNLANAAAAAAAASSSMAATSRNTNGTTGAEGRDGDDAAKTKDEEGEDFEEGGD
DEEEEEEEEAEGNEEGAEKAKKKSRRAAQKSLHEATGAPQIPPADSSAEACINGDAAALL
AAAGMSANSLAFNPFLLSTMAPGLLYPSMFLPPGLGGLSLPGFPTASTLAELQSAMAGAL
GGNPVTTNPPRDEDEDEKEGLKASGEEEEVDGGKSDFGEEEGGAEPRADDSALEDEDEAT
SPQKDKSD
NT seq
9747 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccagggatgttgagcttatttggggacgatgcagggctgttctcggatgga
ttggatggcttgggggactgctttcctccacaacctgcctccgcccagtccaacccttta
acccagcagagtaatccctcactgaaccatgagctccaaggaaacaggggctaccaccag
ggtatgatccacaacaccggggccggcgctgggcaacctaaattggggcagatgtatgac
catggcccctacacaggctacgatcaacctggggccaccggagggcgaatgatggcccag
aacggccccagccagggaccaccaaacgtgaacacggccatgaacggcatggcttcccac
taccacagtaacccagccaactctagtaaccccctccatgggtaccagggtgatgctggg
acaggtggaggtggagctggtgtttggggacagcagacgcagcaacagcagcagactaga
tcagcgtatcagcagcctccaacacaagcaggggccggccctacccagatgggagcctac
cagatgtcgcaaggaaactatggtggcatgcaaggcccggccgcacccaatgcagctcgc
atgaaccaacactacccgtcgcagagcatggtaccccctcctgctcaggacccatctcac
tacctgggacatggaatgggtggcgctcagatgagactcccccagccccaggcacaatcc
cagggctatcccagcatgggccacacagcccgatacccacaatccccttcccgacagcct
tcaatcccccaccagcaccaacagagcatgggaggctttgggagttcccggtaccctggc
tatcaggcccagtatggagccatgggacctgggatgggaccgggaggcaatgtcaatgct
aacacaagcgcggccatgggccccggacagctcggccagaggtttaaccaggtatcaacc
ccagcagctgggccacaggtgcagcgatatccacctggaccaccgcaccaaccccaaccc
cattctaccccaatgcagcaggcagggcagcagggcccgcccatgcacccccaacaccct
caaagtctgccccaggcccaaaacccgccccaatctcaccttgcccccccagctcaggga
aattacccctccccgtcatcaatgtcccccatgcgggttttggggaccccgacccctcct
cctcagcagggaagacctcccagcgcagggttggttggagctccggaggttgcaggttac
gtagccctgcagtctcagcccaatgctatggtgcagagacccccccaaatccctctgtct
gccccacagccccacaacatgccccccagtgcagggcagatgtatcctggcttggggccg
cagcgtggtccacagatggggccaagcaggcctcagctccagccagggcctcttgaagct
gcagccagccaggggggagaccagcgtctgctccaggtcccccgaagtgggccgcccatg
cagcccactcccattggtttccagggtcctgctgtcggtcagcacggcgtcccggccccg
acccagtgcttggcactgcctccccagagcactccaacgcagcatgcacacatgcctccc
cagccgcgccacctgcagagcacacccccgctccccaaccaggcctcccacccctgggcg
ccccctgcctcccacccactctcctcaccccctctaaccccacagaaagtgcctcacgta
cagcattcccccaccgaccagtcagacgcctcaatgatggttcctgacagggcgacggtt
ggcgccggaaccaccggccagccaatcagcacagagcagcccagcaaccaggtgaccaag
ccaaaaaggaaaaggaagaagaagacaaaggtagcggctggagaggatgaaggagggaag
aaggcggcgagagaggaagcagcagccagagaaggagaggaagacgcaaagtctgactat
ctcggagcaggaagtgatgcgggtgaacatgtggccggcacaggaactgtagaggcaagt
tctccgccgacagaggagaaaaagaagcggaaaaagaaaccaaaggagaaggtagagggc
aatgagcctaaggccccgaagacgcccaaaacccccaagacccccaaagagcccaaggag
aagaaagccaagaccaagacccccaagaaacccagcagtaagaaggttgagcccgagggc
gtttccagtgctgctaagaaggattccaagaggaagagagagccgtctgtcagtgaagac
gtggaggtgaagtctccccctccgtcgcctcctgaggaggaggacgatgacggtgtccag
aagcgtcgctccagccggcaggtgaagaggaagaggtacacggaggatctggagtttagg
atctcggacgacgatgacagcggagacgactcgccggcaccaaagtccccgtcgtcacag
ccccaggacgtggctgaggccgaggggcctattgtggagaagatcatgagcaaacgcatc
accaagaaacagctggagttgggggaggaagtgcaggtggaggagttctacgtcaagttc
aagggcttttcgtaccttcactgtcgctgggcagacctggaggagctggagaaggacaag
agaatacaccagaaggtcaagaggttccgggctaagcagcaacttaacagcttcatcact
gagatggatgacgagccttttaacccagactacgtggaggtggaccgcgtcctggacatt
tcagagagcccagatgaaaacggagagacggtgaccttgtatctggtgaaatggtgcagc
ctgctttatgaagactctacttgggagctgaaggctgacatcgaccagtccaagatagag
gaatatgaacgcatcgcagcacgcacacccaacactacaagagtggatcggcctcctgca
gccgactggaaacagctggagggctccagggactacaagaacagcaacgcactcagggaa
taccagctagaaggcctcaactggctaaccttcaactggtacaactcacgtaactgtatc
ttggcggacgagatgggtctaggcaagaccatccagtccattacattcctctacgagatg
ttcatgaggggcatcgagggtcccttcctggtcatcgctccgctctccaccatccccaac
tgggagagggagttcaggacctggacggagctcaacgcggtggtctaccacggcagccag
gccagccgcaagaccatccaggcctacgagatgtactacagagacacacagggtaagata
ataaagggagcatatcggttccacgccatcataacaacctttgagatgattctgaccgac
tgcccggagctgcgcagcgtgaattggcgctgcgtggtgatcgacgaagcccaccgcctc
aaaaaccgcaactgcaaactattggaaggactgaaaatgatggacatggagcacaaagtt
ctgttgacgggaactcctctccagaacactgtggaggagctcttcagcttacttaacttc
ctggagccggagcgcttcccctctgaacagacattcatgaccgaatttggagacctgaag
actgaagagcaggttcagaaactgcaggccattctgaagcccatgatgctgagaagactg
aaggaggacgtggagaagaacctagccccgaaggaggagaccatcattgaggtggagctg
accaacatccagaagaaatactacagggccattctggagaagaacttctccttcttgtct
aaaggaggttctggtggaggaggaggaggtggtggaggaccaaacgtcccaaacctcctc
aacaccatgatggagttgaggaaatgctgcaaccacccatacctcatcaatggagcggaa
gagaaaattgcagaggatttcagggaatcccacggcggcagggcggatatgccggacatg
gccctccaagccatggtccaggccgcaggcaagctggtgctcatcgacaagctgctgccc
aaactgaaggctggcggtcaccgagtcctggtgttcagtcagatggtccgctgcctggac
atcctggaggactacctcatccagaaaaggtatccctacgaacgcatagacggcagagtt
cggggaaacctgcggcaggcggccatcgaccgtttctccagacccgactcggaccgcttt
gtcttcctgctgtgtacgagagccggaggactcggcatcaacctgactgcagcagacacc
tgcatcatcttcgactcggactggaaccctcagaacgacttgcaggcccaagccaggtgc
caccgcatcggccagtccaaggcagtcaagatctaccgtctgatcaccaggaacagctac
gagagggagatgttcgacaaggccagtcttaagctggggctggacaaggccgtcctccag
agcatgagtggacgagacaatgccaacagtggggtccagcagttgtccaagaaggaggtg
gaggacctgctgagaaagggagcgtacggggctctgatggacgaggaggacgagggctcc
aaattctgcgaggaagacattgaccagatcctccagcgacgaacccacaccatcactatc
gagtctgagggaaagggctccacttttgctaaggccagttttgttgcagcgggtaaccga
accgacatttctcttgaggatccggacttctggcagaaatgggccaagaaggctgagctt
gacctggacgccatgaatggaaggaacacgctggtgattgacacgcctagggtgaggaag
caaacgcggcacttcagcagcgccaaagatgacgagatgttggagttctctgagctggag
agcgacgaggacgagccgagcaagcccacgtccaaacccagacggccccaggacaagacc
cagggctacccccggtcagagtgcttcagggtggagaagaaccttctggtctacgggtgg
ggcaggtggagcgacatcctggctcacggtcgcttcaagcggcccctgaaggagcccgac
gtggagacaatctgcagggccctgctggcctactgcctgctgcattatcgcggagacgag
aacatcaaaagcttcatctgggacctgatcaccccaagtgcagatgggaccaccaagaca
ctgaccaaccactcgggtctctccactccggtcccccgaggcaggaagggcaagaagggg
aagcctgcagccccgcctccacagacaccacgagccgattggctggccagctgcaaccct
gaccacttactgcaagaggatagctacaagagacacctgaaacaccactgtaacaaggtg
ctgctgcgggtgaggatgctgtactacctgagacaggaagtgattggggaccaggccgat
cgcatcctggaaggagctgactccagcgagctggacatctggatccctcagcctttccac
gccgaggtgccggccgactggtgggagaccgaagccgacaaatccctgctcatcggcgtc
ttcaaacatggctacgagaagtacaactctatgcgagccgaccccgccctgtgtttcttg
gagagggtgggcatgcccgacgccaaggccattgccgctgagcagaggggctctgacatg
atgacagatggcgttgagggtgaggatgaggatccagagtacaagcccctgcggatgcct
ttcaaagatgaaatggaggacttcaccaactctcctttggatgacaaagatgagcatgcg
gacggtgaggtggaagctaaatccggtgaaaacggtcagggcgtgggcggagcctcgggc
tccaacgagcgactctactggccggcggcctcggctctcactgcccggctgcgtcgcctc
atcacggcctaccagcgctccaaccgcagggagcagctccgccaggaggccctcagccgg
cccgacggccgccgccgccgccgcagggacttcctgccagccattggcatggttaccgac
gcgtcgggaggaggagcaacttatatccaagatgctgcggcggtgttcatgacggacgga
ggcccgtacctgactaaaggaggggcctactttgccaaaggggggcaattcctgccggag
gcgtcgccggtggtgaacgccagctcgctgatgacggatggcgccttgtattacaaggaa
agacgacaacggtggactcgtcgcgaggaggcggatttctatcgcgtggtgtccaccttt
ggagtcgtctatgacacccagcggcagagatttgactgggcgcagttcagggcctttgct
cgactggacaagaaaaccgatgagagcctggagaaatactactactccttcattgccatg
tgcaagcgcgtgtgcaggatgcaggtcaagacggaaaccgaactccctgacccgaccctg
atcatcgaccccatcacagaggagcgcgcctctcgcaccctgtaccgcattgagctgctc
cgccgcatccgagagcaagtcctcccccacccgctgctctcggagcgcctcaagctttgc
cagtcctccccggacctcccagagtggtgggagaacggccgccacgaccatgacctcctc
ctgggggcctgcaagcacggtgtgagccggacagactaccacatcctaaacgaccccgcc
ttggccttcctggaggcccaccagcgctccaccggccagggggccgcggcccagggcgag
atcaccaaagcaggactgggattggcagagagcaaccctgtgcccctcctcaccgccgcg
gagatggcaagcgctgccgaggctgccaaagtgtcccttattgcagctaaagaggaggat
ggcgaagagaaggtgaaaatggaaacagaggaaggagatgcgggggacatcctgctggtc
aagagtgaacgtgtcgatgaacagaagggaaatgaggaatgtaccgcttcgccaacaaaa
gaggtgaagaaagaggaggaggaagccatgcccgaactgaaaaaagaggagcagaaagtg
gggcagactgaagacggagagacatcctcaaagccggcagacaaccaagacaaaggccgg
acggaagagaagacaagcgccgactcgctggaggaccagacggagacgaccgccgagctc
tcagagcatccggactcttctccaatagacccaccaggccacaaggctgcagagcaggag
gaccgggaggagaaggagctcccagactcccctaaaactcctaagtcagccgagacggag
aaaagcccggaggacgaggacgacgaggacgaggagaggatggatgaggatgacaaatcg
gagaagtcctctcaggctgaagtgagcgctgcatccgaacagaagaactttgacgaggac
agcatcgcgtcgctgagcacgtcggccagagacgggttccaccccgacgacctgcccgag
acctctgccctgcaggccctacacgaccgctcctacgccttctccttctggcccaaggac
cgagtgatgatcaacaggatggataacatctgtgaggtggttctgaagggcaagtggcct
gtaaacaggcggcacatctttgacttccccggcaacatgctaccggggcaaagcgccgct
gtcgctgcagcagcatccaccgtcgccacagtgaccgtcagcccgctacagaggcggagc
ctcgccgagctgactatggccggcatgcacacagcttacagcgggagtgaggataaaacg
ctatcgccacaggttcatgaggacgctctcagcctgacggcgcctcgccagaggaggagg
aggcggagaaagattgagatcgaggcggagagggcggccaagaggcgcaacctgatggag
atggtggctcagctgagagagagccactctgccgccgagtcccagagccaggccatcgac
ctcaccaagggcatgcaccttcaccacaaggctgctccctcattggccggcttccccagt
gccctggtgacaagcccctcactcaaggcccagatggagttactgcagcaagccccgccc
tccggacacagagccaacggttcactggaggctgacctgcccatcacaaggagaaggcgg
ggccgcaggaaaaatgtggaaggcctggatctgctgttcatgggcaacaagagagcagga
ggggatgacaccgatgggacaaaagtctcaggtgcagagggggtcaaggcccaaagaccc
ctcagcgtccccgagcagagccccagtgccaggtctctggcctctggaagtctggaggag
gacgaggcagccgtttccaacaaggagctgggggagtggctgaggcagcaccctacatac
acaatggacatgactggattcacaccaaagagcgacgatgcactgctgtcgcagttctcc
aagcccaagcagaagcgccaccgctgtcggaacccaaacaagatcgacatcaacaccctg
accggagaagagcgagtgcctgtagtcaaccgacgcaacggacgcaagatgggcggagcc
atggctccacccatgaaggagctccccagatggttgctggagaacccggagtattctata
gcccccgattggaccgacatcgtcaagcagtcgggtttcctcccggaggccatgtttgac
cgcctactgaccggccccgtggtcagggaggagggcgtccgccgccgagggcgacggcca
aaatctgagatcgccaaggcggccgccgccgcccaggcctcggcagcggctcacgccgcc
caagcctcggctgctcaatctgcaggcggaatcaaccctctgctgttgaacagcctgttt
ggagggatggacctgtcgtccctgcagagcctccagtcgctccagttggccgctggtctg
atggcgttccctcaccccagcgaccccaagcaggctgccgctgctgcctccatgctgccc
ctcatgctgcccggtatgggaggcatgcccaacatggctgccctcccaaacatgttcagc
ctaggcggcctgttcggcggcaatctggctaatgccgctgccgctgccgccgcggcatca
agctccatggctgccacgtcacggaacaccaacggaacaacgggggccgagggacgagac
ggcgacgatgcggccaagacgaaggatgaggagggagaagactttgaggaaggaggggac
gatgaggaagaggaggaggaggaggaggctgagggtaatgaggaaggggccgagaaggcg
aaaaagaagagcagacgagcggcgcagaaatctctacacgaggcgactggagctcctcaa
atcccccccgccgactcgtcggcagaggcctgcatcaacggcgacgccgcagcgctgctg
gccgcggccggcatgtcggccaactcgctggcgttcaaccccttcctcctctccaccatg
gcccccggcctcctctacccctccatgttcctgcctcccggcctcggggggctcagcctg
cccggcttccccaccgcctccaccctggccgagctgcagagcgccatggccggagcgctg
ggggggaaccccgtgaccacgaacccccccagagacgaggacgaggatgagaaggagggg
ctgaaagcttccggagaggaagaggaggtggatggaggaaagagtgactttggcgaggag
gagggtggagcagagccgagagcagacgattcggccctggaggacgaggacgaggcgacg
tctccacagaaggacaagagtgactga
DBGET
integrated database retrieval system
