Pungitius pungitius (ninespine stickleback): 119209306
Help
Entry
119209306 CDS
T07626
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119209306
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119209306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
Ig_3
I-set
LRR_1
ig
LRR_EndoS
LRR_14
Ig_2
LRRNT
LRR_LRWD1
LRR_RPS2
LRR_6
V-set
Motif
Other DBs
NCBI-GeneID:
119209306
NCBI-ProteinID:
XP_037314427
LinkDB
All DBs
Position
15:complement(10283324..10311020)
Genome browser
AA seq
622 aa
AA seq
DB search
MTSSPGPGGRALVPWPWVSRWLLAASLVAVITFTLPGNSEACPPRCDCSAQLRSVSCQRR
RLTNIPEGIPTETRLLDLSKNRLRWVQAGDLAPYPRLEEVDLSENLIATLEPNAFASLQS
LKVLKLRGNQLKLVPMGAFAKLGNLTSLDLSENKMVILLDYTFQDLRGLKHLEVGDNDLV
YISHKAFSGLLGLEDLTIERCNLTSISGQTLSYLRSLVTLRLRHLSIIALDDQNFRKLSN
LRALDIDHWPYLEYISPLSFQGLDLHRLSITNTNITSVPSSSFKNLVHLTHLNLSYNPIT
TLEPWAFKDLLRLKDLIMVSTGLMTVELHALGGLRQIRVLNFSSNDLQTLEEGSFHSVNS
LETLRVDGNPLMCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGVSLSTFTDSALFDHFT
CQKPKIRNRKLQQVIAREGQPVSFLCRAEGEPAPAIIWISPQRRRITAKSLGRITVLSSG
TLEIRYAQLTDSGTYICIASNAGGNDTYFATLTVRGQPLDAASAFFLNRSLYSGDFFNDT
NLNNTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSF
RKSEPVTGSSSGGTRKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctctcctggccctggtgggcgggccttagtgccatggccatgggtgagtcgg
tggctcttggctgcttctttggtcgccgtcataaccttcacgctgccaggaaatagcgag
gcctgtccgccccggtgcgattgctcggctcagctgaggtcggtgtcgtgccagcggcgg
cggctcaccaacatcccagagggcatcccaacagagacaagacttctggacctcagcaag
aaccggctccgctgggtgcaagcaggtgacctggcaccgtatccgcggctggaggaagtt
gacctcagtgagaacctcatcgccacattggagcccaatgccttcgccagcctccagagt
cttaaagtgctgaagttaagaggaaaccagctgaagttagtgcccatgggggctttcgct
aaactgggcaatctaaccagcctagacctgagcgagaacaagatggtgattttattggac
tacaccttccaggatctgaggggcctgaaacatttggaggtgggagacaacgacctggtt
tatatatcccacaaggcattctcagggctgctggggcttgaagatctcacgatcgagcgc
tgcaacctgacatccatctctggccagaccctgtcatacctgcgcagcctggtcaccctt
cgcctccgtcacctcagcatcattgctctggacgaccagaacttccgcaagctgtctaac
ctccgggctctggacattgatcactggccgtacctggagtacatctctcctcttagtttc
cagggcctggacctccatcggctctccatcaccaacaccaacataacctctgtcccctcc
agttcctttaaaaacctggtgcatctcacccacctgaacttgtcctacaatcccatcacc
accctagagccctgggccttcaaagacctgctgaggctgaaggatctcatcatggtaagc
acagggttgatgacagtggagctccatgccctcggaggccttcgacaaatccgggtcctc
aacttctcctccaacgacctgcagactcttgaagagggctccttccactctgtcaacagt
ctggagaccctcagagtggacgggaaccccctgatgtgtgactgccgtcttttgtggatc
ctgcaaagacgcaagaccctcaactttgacggcagagtgccggtgtgtgccgggccggtg
gaggtgcaaggggtcagcctcagcaccttcaccgattctgcactcttcgatcactttaca
tgccagaaacctaagatacgcaaccgtaaactacagcaggtgatcgctcgcgagggccaa
cctgtgagttttctgtgtcgtgctgaaggagaacctgcccctgctattatctggatttcc
ccacagcgcagacggataacagccaaaagtttagggcgcatcactgttctctctagcggt
accctggagatccgctacgcgcagctcactgacagcggaacatacatctgcatcgccagc
aatgccggaggaaatgacacctactttgccacactcacagtgcgcggccagccactcgac
gcggcctcggccttcttcctgaaccgctcgctgtacagcggagatttcttcaacgacaca
aatctgaacaacacgcgtgttttcctcaagttcaccttggacctgaccaccatcttggtc
tccacggcaatgggttgcatcacattcctgggagtggtcctcttctgtttcctgctgttg
ttcgtgtggagccgaggacgcggccaacgcaagaacaacttcacagtggagtactccttc
cggaaatctgagcctgtcaccggcagctcctcgggaggcaccaggaagttcaacatgaag
atgatatga
DBGET
integrated database retrieval system
