Pungitius pungitius (ninespine stickleback): 119209307
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Entry
119209307 CDS
T07626
Symbol
sema6ba
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba isoform X1
KO
K06842
semaphorin 6
Organism
ppug
Pungitius pungitius (ninespine stickleback)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
119209307
NCBI-ProteinID:
XP_037314431
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All DBs
Position
15:10056713..10081801
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AA seq
946 aa
AA seq
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MLRRRAGTVEGRDREEEERPERASWRLAPATPPRPPPPPFTCPSGAHICVAAMATMAPPL
TFLLLLLQLADGSFPEEPSPLSYVPVEVVRRYPVFLGRAHRSAQRQDLHIQTVLQVNRTL
YIGARDDLYRVELDNMAGDEMFYSKKRTWESNKNDIRVCRMKGKHEEECRNFIKVLLSQH
GGLFVCGTNAFNPLCANYTKDTLEMVGEPVSGMARCPYDPRHANVALFADGSLFTGTVTD
FLAIDAVIYRSLGDSPALRTVKHDSKWFREPYFVSSMEWGPHIYFFFREMAMEFHHLEKV
MVSRVARVCKADLGGSQRVLEKQWTTFLKARLNCSVPGDSHFYFNLLHATSNIIHMHGRD
VILGLFSTPPNSIPGSAVCVFDMQQLAHVFEGRFKEQKSPESIWTPVPDEAVPKPRPGGC
AVQGSRFSSSTTLPDEVLNFVKTHPLMDDTVPLLGHRPWVVKTMGRYQLTAMVVDTEAGP
HKNRTVLFLGSTRGSVLKFLMISSGDSFSHSSVFLEEVEGFNPEKCGEDSPQARQLLSLS
LDRSSHTLLLAFPSCLVRVPTSRCHLHSRCMKSCLASRDPYCGWTRGSTCSFLRPGTRLP
FQQDVEYGNTTSHLGDCDGILQQSLLIEPESLVSLNLLVASAVSAFTIGAALSGLAVCWI
MAHKPTNRRHGNTTQSSIQRRERGLLANGGGMGGSVLSVTRQGGGDRPCTQGGETLFVMP
NGWVKSGELDPGFLPTPEHTPQQKRRGLRLSDSNSGGWDTSQTYLGGGSVGLGSPCRIPP
TVYLTTRLFQQGGGGRHGGESRGNDTPRQHYVCLSKLEKGVKGTPKAPLRKSAGEYVYPM
TPQDSPERRRVVSAPSAPVEYGEPLPLRWPAPEGYILSSHGMVPVPLPPPSMPAPSGQAY
MSQQHAPGLSRALLRGALERGELGELVDLSQLMSKKNCGDRTQTGQ
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgctacggcggcgcgcagggaccgtagagggaagagacagagaggaagaggagcgaccg
gagagggcgagttggcgactggcacctgccaccccaccgcgcccccctcctccccccttt
acctgcccatctggtgcgcatatctgtgttgctgccatggcgaccatggctccgcccctc
acatttcttctcctgctgcttcaactggcggatggctcattcccagaggaacccagtccc
ctcagctacgtccctgtagaggttgttcggaggtatccagtgttcttgggcagagctcat
cgttcagctcagagacaggatctgcacatccagacggtcctccaagtcaaccgcactctc
tacattggtgccagagatgacttgtacagagtggagttggataacatggcaggggatgag
atgttctacagcaagaaacgaacgtgggaatccaataagaacgacattcgagtgtgccgg
atgaagggcaaacacgaggaagagtgccgtaatttcatcaaggttttgctcagccagcac
ggcggcctgtttgtatgtggaaccaacgccttcaacccgctgtgtgccaactacactaag
gacactctggagatggtgggggagcctgtgagtgggatggcccggtgcccgtacgacccg
cggcacgccaacgtggctctgttcgcagatggaagtctctttactggcactgtgacagac
ttcctggccatcgatgcggtcatatatcgcagtctcggcgacagccccgccctccgcaca
gtcaaacatgactccaaatggttcagagagccctactttgtgagctccatggagtggggg
ccacatatttatttcttcttccgagagatggccatggagtttcatcatctcgagaaggtg
atggtgtctcgagtagctcgtgtgtgtaaagcagacctgggtggctctcagcgcgtcctc
gagaaacagtggaccacttttctgaaggcgcggctcaactgctccgtgccgggagattca
cacttttacttcaacctcttgcacgcgacaagcaacatcatccacatgcacgggcgggac
gtcatcctgggcctcttttccactccgccgaacagcatccccggctcggcggtgtgcgtg
ttcgacatgcagcagctcgctcacgtctttgagggccggtttaaagagcagaaatccccc
gagtctatttggacacctgtgccggacgaagctgtgcctaaaccgagaccaggaggatgt
gcagtgcaggggtccagattcagctcctccaccacgctgccggacgaggtgctgaacttc
gtgaagacccacccgctgatggacgacaccgtgccgctcctggggcacagaccttgggtg
gtcaagaccatggggcggtaccagctgacagccatggtggtggacaccgaagctggtccc
cataagaaccgtaccgtcttgttcctgggctccacccgagggtccgtcctgaagtttctg
atgatttccagcggagattcgttctcccacagcagtgtgtttctggaggaggtagaagga
tttaacccagagaagtgtggcgaggactctcctcaggcccgtcagctcttgtccctgtca
ttggaccggtccagtcacactctgctgctggccttcccctcctgtctggtgcgagtgccc
acgtctcgctgccacctgcactcacgctgcatgaagagttgtctggcctccagggacccg
tactgtggctggaccagaggcagcacctgctccttcctgagaccaggcacacggctgccc
tttcaacaagatgtggaatatggaaacaccacctctcatctaggagactgcgatggaatt
ctgcagcagagtttgcttattgaaccagagagcttggtctccctcaacctgctggtggcg
tctgcagtatccgcgttcaccatcggggcggcgctctccggcctcgccgtctgctggatc
atggcccacaaacccaccaaccgtcgccacggcaacaccacccagtcctcgatccagcgg
cgcgaaagaggcctgctggctaacggcggcgggatgggaggctccgtgctcagcgtgacc
cggcagggaggcggggaccgcccctgcactcagggcggggaaaccctgtttgtcatgccc
aacggctgggtgaagtcaggggagctcgacccgggtttcctgccgacgccggagcacacg
ccccagcagaaacgcagaggcctgcgactgtctgactccaactccggagggtgggacacc
agccagacgtacctaggcggaggctctgttggcctgggctctccctgccgcatccccccc
accgtctacctgaccaccagactcttccagcaggggggaggcgggagacatggcggagag
agccgtggaaacgacacgccacgccagcactacgtctgcctgagcaagctggaaaagggg
gtgaaggggacgcccaaagcccctctccgcaagtctgctggagaatacgtgtaccccatg
accccccaggactcgcccgagcgccggagggtggtttcagcacccagcgcccccgtggag
tatggcgagccgctgcctctgcgctggccagccccggagggatacatcctgagcagccac
ggcatggtccccgtccccctgcctccaccctccatgcccgctcccagtggccaggcttac
atgtcccagcaacacgcccccgggctgagcagggctctgctgagaggagccctggagcga
ggggagctgggcgagctggtggatctcagccagctgatgagtaagaagaactgcggcgat
aggactcagaccggccagtga
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