Pungitius pungitius (ninespine stickleback): 119209310
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Entry
119209310 CDS
T07626
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119209310 (fubp1)
03041 Spliceosome [BR:
ppug03041
]
119209310 (fubp1)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
119209310 (fubp1)
Spliceosome [BR:
ppug03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119209310 (fubp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_PNO1_2nd
KH_KHD4_2nd
Secretin_N
Motif
Other DBs
NCBI-GeneID:
119209310
NCBI-ProteinID:
XP_037314437
LinkDB
All DBs
Position
15:6676762..6685391
Genome browser
AA seq
680 aa
AA seq
DB search
MADYSSVAPPSSNNGAGMNDAFKDALQRARQIAAKIGGDGVAAPPTNEFGYGGQKRPLED
AGGYFPMPNLNIDQPETKKVATNDAFSAMGGMGGPPRSISEEFKVPDGMVGFIIGRGGEQ
ISRLQQESGCKIQIAPDSGGMPDRSVTLTGGPESIQAAKRLLTEIVDKGRPAPAFNHNDG
PGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPF
KVQQAKEMVMELIRDQGFREQRGEYGSRVGGGGGGGNGGQGGGGGGGDSLDVPVPRFAVG
IVIGRNGEMIKKIQNDTGVRIQFKPDDGSTPERIAQIMGPPDQAQHAAEIISDLLRSVQA
GGPPGHGGGRGRGRGQGNWNMGPPGGLQEFTFTVPTMKTGLIIGKGGETIKGISQQSGAR
IELQRNPPPNADPNIKMFTVRGSPQQIDYARQLVEEKIGGPVTPMGGPHGGPGPHGGPGP
HGPPGPPGPPGAPMGPYNPGPYNQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPNKAAA
DANAAAWAAYYAQYSQQPQAPMTPTSGAPGTTQTNGQGDQQAAGQSGQADYSKAWEEYYK
KTGQQSQQPQDYTKAWEEYYKKQGQAAPQATAAAAAASTQPGGQPDYSAAWAEYYRQQAA
YYGTANPQAMGAAPQAPQGQ
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggctgactacagcagcgtggctcccccgtcctctaacaacggtgccggaatgaacgac
gcttttaaagacgctcttcagagagctcgacagattgcagcgaagattggtggcgatggc
gttgcggcacctccaactaacgaattcggctacgggggtcagaaaaggcccctggaggac
gctggtgggtattttcccatgcctaacctgaatatcgaccaaccagagacgaagaaagtg
gctacaaatgacgcgttctcagcaatgggaggaatgggtggaccaccaaggtcaatatcc
gaggaattcaaggtaccagatggaatggtcggattcattattggaagaggaggtgaacaa
atatcacgtctgcagcaagagtcggggtgtaaaatacagattgctcctgacagtggggga
atgccagataggtcagtgacattaacgggaggaccggaatcaattcaggcggcaaaaagg
cttctaacggagatcgttgataaaggacgtccagcgccagcattcaaccacaacgacggt
ccgggaatgactgtccaggagattatggtccctgcgtctaaagccggactcgtcattgga
aagggtggagaaacaatcaaaagccttcaagaaagagctggcgtgaagatggtcatgatc
caagatggaccccaaaacacaggcgctgacaagccactccgcatttcaggagagcccttt
aaagttcagcaagccaaagaaatggtgatggagctgatcagagatcaaggcttcagggag
cagaggggcgagtatggttctcgagttggaggtggcggaggcggcggcaatgggggacaa
ggaggaggagggggaggaggagacagcttagatgttcctgtaccccggtttgcagtggga
attgtcattggcagaaacggagaaatgatcaagaaaatacagaacgacacaggcgtccgg
attcagtttaaaccagatgacggcagtacaccagagaggatagcccagatcatgggtccc
cctgaccaagctcagcacgccgcagaaataatttcagatctgctgcggagtgtccaggcc
ggcggccctccaggacatggtggtggcagaggtcgtggtcgtgggcaggggaactggaac
atggggccccctggtggtctgcaggagtttaccttcactgttccaaccatgaagaccggc
ctcattatcggaaaaggtggagagacaatcaaaggcatcagtcagcaatctggagccagg
atcgagctgcagaggaatcccccacccaacgctgatcccaacatcaaaatgttcacagtc
cggggctcccctcaacagatcgactatgccaggcagctggtggaggagaaaattggggga
cctgtcacaccaatgggaggtccacacggtggtccaggtccacacggaggtccaggtcca
catggtcctcctggaccacccggaccccctggcgctcccatgggtccatacaaccctgga
ccatacaaccagggacctccaggacctcatggtccaccagcgccataccagcctcaggga
tggggcaatggctacccacactggcaacaggggcaacctgacccaaataaagcagcagcc
gatgccaacgcagcagcgtgggcagcctactacgctcagtacagccagcagccgcaggct
cccatgaccccgacaagtggagctcctggcacgactcagaccaacggccaaggtgaccaa
caggctgcaggtcagagtggacaggcagattactccaaggcctgggaggaatattacaag
aaaactggtcaacagagccaacaacctcaggactacacaaaagcctgggaggagtattat
aagaaacaaggtcaagcggcgcctcaggccacagcggcagcggcggcggcttccacccag
cctggcggccagccagactacagtgccgcctgggcggagtactatcgccagcaggcggcg
tactacggcacggccaatcctcaggcgatgggtgcagcaccacaagcccctcagggccag
taa
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integrated database retrieval system
