Pungitius pungitius (ninespine stickleback): 119209320
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Entry
119209320 CDS
T07626
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119209320 (zeb1b)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
119209320 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_6
Homeodomain
zf-C2H2_15
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
119209320
NCBI-ProteinID:
XP_037314458
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All DBs
Position
15:32661..65923
Genome browser
AA seq
1175 aa
AA seq
DB search
MADGPRCKRRKQANPKRSSVTDFNNGPEASSDSDDEDKLHIVEEDSLQEPEGANGAKAEA
TAKATLLPQCNGAANGVKEEYVSEAEEEPEEGTLAYEILQHRGTAVIYPLAPQDEQSPAE
TGGADENGTPDSFPQLHTCPYCSRGYKRNASLKEHIKYRHETSDDNYSCAHCSYTFTYRS
QLERHMSHHRGSRDQRHVSQSTGGSGGTGGIRKFKCTECCKAFKYKHHLKEHLRIHSGEK
PYECSHCKKRFSHSGSYSSHISSTKCLGTAPPDDVPRTPIKPPPLSTQAAPAATAPTRVI
LKEKAESKPLQEQLPVTQIKSEPVEYECKPAMAASATPAGGAAQPAAVPAATPAPSVAMV
VPTVGLMSPISINLSDLQNVLKVAMDGNVLRQVLGTANGVVTQGKQGIVVQQPQQQIISL
PAFVDHDGTTKIIINYSIGPAAATAATTLTAALVAKTNPAPAPVPVATAAAAPTPTKTVE
PSVPAAADLSVVKAEPESVAIADVQTEAMAQTGRTQRARLPKGNSSSTCVLCDDCPDNLE
ALHLLQHRKAANGEAVDSAALDPSFAALLSEAGVTLEEPPVDDLLALLKTYFASNANPGE
GELAKISESVSIHVDVVRKWFAKMNSVGTRRGKDAAVSKDAETTQCGSQDASERSAAAAE
GDGARETSDKASSDSGAGDLVIIKSEPEDGEPADSQAEPLDLSLPKHAAAETAAPPPKQQ
EQPLNLTCLRKEQLEGRTIYVTAPQTGRSVRIISAAQLPTLVAIAGQGTLSCLNATAKRT
ILIPQLTYTYAAAAGGAAGAKTVVLNGHKLQQEKKSDSSSNGGSPADEQNDSDSAALMKK
RRLENGVYPCDLCFKVFQKGSSLLRHKYEHTGKRPHECNVCMKAFKHKHHLIEHSRLHSG
EKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKDWLGSGSGPPGAQLELSSPGAGLQSDSR
TTTPPSQLDSDERESEEEEDDEDEDDEAMCMDDIRVVQVDDGDCEIYEGNFEDEEEEGEE
IVEEEATGEHQAEVEEVVEEDETGEDEAEGIVEEEDAAGEEEENVKEGATQEEEGEELME
EDAPGEEDEIMEEEGEANEIMEEDTKAEEEAEAEKVVSDGVAGDVPQVEVGNDHKEDEEM
EETTSEKKETPDCEANTDKSAAEESAGAKTTEEVV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaaccccaagcggagcagcgtg
acagacttcaacaatggtccggaggccagttcggactcggatgacgaggacaagctacac
atcgtggaggaggacagcctgcaggagcccgagggcgccaacggggccaaagccgaggcc
acagcgaaggctacgctgttaccgcagtgcaacggcgcagccaacggagtgaaggaggag
tatgtgtccgaagcggaagaggagccggaggagggcactctggcgtacgagatcctgcag
caccgaggcacggccgtcatctacccgttagccccgcaggacgagcagagtccagcggag
acggggggcgcggatgaaaacggcaccccggactccttcccccagctgcacacctgcccc
tactgctcccggggctacaagcgcaacgcctcgctgaaggagcacatcaagtaccgccac
gagaccagcgacgacaactacagctgcgcgcactgcagctacaccttcacctaccgctcg
cagctggagaggcacatgagccaccacaggggcagcagggaccagcggcacgtttcccag
tcgacgggtggatcgggaggaacaggtggaatccgcaagttcaagtgtaccgagtgttgc
aaggccttcaagtacaagcaccacctgaaggagcacttgcgcattcacagcggtgagaaa
ccgtacgaatgctcccactgcaagaagcgcttctcccactcaggctcctacagctcccac
atcagcagcaccaagtgtttgggcaccgcccctcccgacgatgtccctcgaacgcccatc
aagcccccgccgctctccacccaagcagcgccagctgcaaccgctccgacccgcgtgatt
ctcaaagagaaggctgagagcaaacccctccaagagcagctccccgtcacgcagatcaag
tccgaacccgtggaatacgagtgcaagcccgcgatggcggcgtccgcgacccccgccggc
ggggcagcacagccggccgcggtcccggccgcgacccccgccccgagtgtggcgatggtg
gtcccgacggtgggcctcatgtcgcccatcagcatcaacctcagcgacctgcagaacgtg
ctcaaggtggcgatggacgggaacgtgctgcggcaggtgctgggcacggccaacggcgtg
gtgacgcaggggaagcagggcatcgtggtgcagcagccgcagcagcagatcatcagcctt
ccggcctttgtggaccacgacggcaccaccaagatcatcatcaactacagcatcggcccc
gcggccgccaccgctgccaccaccctgaccgccgcgctggtcgctaagaccaaccctgcc
cctgcccccgtccccgttgccacagccgccgccgcccccacccccaccaagacggtcgag
ccctctgtcccggcggcggccgacctctcggtcgtgaaggcggagccagagtcggtggcc
atcgccgatgtacagacggaggccatggcgcagacgggaaggacccaaagggctcggctg
ccgaagggcaacagctccagcacctgcgtgctctgcgacgactgccccgacaacctggag
gcgctgcacctcctccagcaccgcaaggccgccaacggggaggccgtcgactccgccgct
ctggacccctcgttcgccgcgctgctcagcgaggcgggggtgacgctggaagagccgccc
gtggacgacctcctcgcgctcctcaagacctacttcgcctccaacgccaaccccggagag
ggggagctggcgaagatctccgagtcggtcagcattcacgtggatgtggtcaggaagtgg
ttcgcgaagatgaactccgtggggacgcggcgcgggaaagacgcggcggtttcaaaggac
gcggagaccacgcaatgcggatcgcaggacgcctcggagcgcagcgcggcggcggcggag
ggggacggagcccgagaaacatccgacaaagcctcctcagactcaggcgccggggacctc
gtcatcatcaagagcgaaccggaagacggcgagccggcggattctcaggccgagcccctc
gacctctccctcccaaagcacgccgcggcagagacggccgcgccgccccccaagcagcag
gagcagccgctgaacctgacctgcctgaggaaggagcagctggagggtcgcacgatctac
gtcaccgcgccgcagaccggcaggtccgtccgaatcatctccgccgcgcagctgcccacg
ttggtggccatcgccggtcagggcacgttgagctgcctcaacgccacggcgaagcgcacc
atcctcatcccccagctcacgtacacctacgccgccgcggccggcggcgccgccggagcg
aaaaccgtcgtactgaacggccacaagttgcagcaggagaagaagtcggacagcagctcc
aacggcggctccccggcggacgagcagaacgactcagactcggccgcgctgatgaagaag
cggcggctggaaaacggcgtctacccgtgtgacctttgcttcaaagtcttccagaagggc
agctctctgctccgacacaaatacgaacacacaggaaaacggccccacgagtgcaacgtc
tgcatgaaggccttcaaacacaaacaccacctgatcgagcactccaggctgcactccggg
gagaaaccctaccagtgcgacaagtgcgggaagcgcttctcccactcgggctcctactcc
cagcacatgaaccaccgctactcgtactgcaagaaggactggctgggctccggctcgggg
ccccccggggcccagctggagctcagcagccccggcgccggactacagtcggacagccgg
accacgaccccgccctcccagctggactcagacgagagggagagcgaggaagaggaggat
gacgaggacgaggacgacgaggccatgtgcatggacgacatccgggtggtgcaggtggac
gacggcgactgcgagatctacgagggcaactttgaggacgaggaggaggagggggaggag
atcgtggaggaagaagcaacaggggagcatcaggcagaggtggaggaagttgtggaggaa
gacgagactggtgaagacgaggcagagggaattgtggaggaagaagacgcggcaggagag
gaagaggagaatgtgaaggagggcgcaacacaagaggaagagggggaggagttaatggag
gaagacgcgcccggagaggaagatgagatcatggaggaagagggggaggcgaatgagatc
atggaggaagacaccaaagctgaagaggaggccgaggcagagaaggtggtgtcggacggg
gtcgctggtgacgtcccgcaggtggaggtcgggaacgatcacaaggaagatgaagagatg
gaagagacaacttcagagaagaaggaaacgccggactgtgaagcaaacacggacaagagc
gccgcggaggagtcagcgggcgccaaaaccaccgaggaagtggtgtga
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integrated database retrieval system
