Pungitius pungitius (ninespine stickleback): 119209364
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Entry
119209364 CDS
T07626
Name
(RefSeq) contactin-associated protein-like 4 isoform X1
KO
K24337
contactin associated protein-like 3/4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119209364
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
119209364
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
119209364
NCBI-ProteinID:
XP_037314545
LinkDB
All DBs
Position
15:complement(69489..111400)
Genome browser
AA seq
1326 aa
AA seq
DB search
MDSRSHSRSHPRSHSRSHPRSHSRSQGAAGIIAHVALLLCSSCGTTGEEVCDGTLVSNLP
PASFRSSSQLSSSHAPSFAKLNRRDGAGGWSPLTSDRYQWLQVDLGQRTKIAAVATQGRY
GSSDWLTSYLLMFSDTGHNWKQYRQEDSVGSFPGNSNADSVVQYKLQQPATARFLRLLPL
HWNPSGRIGLRLEAYGCPYTSHVLSLDGSSTGLAYRRSPAAPGSVGDVVSMEFKTLRNSG
TLLRAEGGGGLGLSLQLERGTLLLLTRGPASSEPRRVASLGSLLDDQHWHRVAVEWRGSQ
LNVTVDEHTERVRIPAEFGSWDAEQLSVGTVSSPDVSERNFHGCLENLQYNGLNLIELAQ
NKDLRVAVRGNVTFSCAESVSVAVTFPGPQSFLRLPWATSSLSKGVSVGFQFRTWNDAGL
LLTFDLPEGGGVVWLYLSEARLRLQIHKDGRVPLELSAGSALNDGQWHSVTLTSSRGRLS
IGVDAEEGGSAQAATSYPVAVESHLFFGGCPAENNEPRCRNPFSVFQGCMRLLVLNHLMV
DLIMVQKKQLGIFSHLQIDMCGIIDRCSPSRCEHGGRCSQSWTVFRCNCSASGYSSATCH
SSVYEPSCEAYKHNGNTSGHFYIDVDGSGPIRPQLVYCNITEENTWMEIQHNNTELTRVR
PSPAARQHLLHFNYSTEEEQLLAAISQSEHCQQELSYRCRKSRLLNTPEGSPFSWWLGGP
GPGRVQTYWGGAQPGSRQCACGLQGDCVDPQHYCNCDADRAEWAEDSGLITHKENLPVRS
LVLGDVQRAESEAAYRVGPLRCHGDKNFWNAAFFDKETSYLHFPTFHGELSADISFLFKT
TASSGVFLENLGIKDFIRIELSSSTRVVFSLDVGDGPLEVGVDSGVPLNDDRWHRVRAER
NVREASLRLDGLPVAAREAPADGHLHLQLNSQLFIGGTASRQKGFRGCIRALRLNGVALD
LEERARITPGVRAGCPGHCGSYGSLCRNRGRCAERANGFLCDCGLSAYTGAFCHTEVSAR
FLPGTTVSYTFRQPRGSGRNSSARPSSIYSDTTLRGEDVSLSFRTTQSPALLLYVSSHHG
ESLALLINKHDKLEVRYKLDGSRGAEVLRSAARSLADGRLHAVSVRRRKDAVSLQIDQSP
REDFNLTSDGELNGITSLVLGRVHGTDAVEPQLSRLASLGFTGCLSVVRFNSISPLKAAL
LHPHSSPVVVTGPLVRSSCGSSASANPHAVEDTRRLSDQSGSVGSGQPLVNSIGTDSALI
GGVIAAAVFVMASGLAIGGRFLYRRKETYRSQEAEGVKREDSQDFAFTDQRDSQSVSTEK
PKEYFI
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atggattctaggagtcattctaggagtcatcctaggagtcattctaggagtcatcctagg
agtcattctaggagtcaaggagccgctgggattatcgctcacgtcgcgctgctcctctgc
agctcgtgcgggacaaccggagaagaggtgtgcgacggcacgctggtgtccaatctgccg
ccggcgtccttcagaagctcctcccagctgtccagcagccacgcacccagcttcgccaag
ctcaacaggagggacggcgccggaggctggtctcctctcacctcggacaggtatcagtgg
ctgcaggtcgacctcggccaacggaccaagatcgccgccgtcgccacgcagggccgctac
ggcagctccgattggctgacgtcgtacctgctgatgttcagcgacacggggcacaactgg
aaacagtaccggcaggaggacagcgtcgggtcttttccaggtaacagtaacgcagacagc
gtggttcagtacaaactgcagcagccggcgaccgctcgcttcctgcggctcctccccctg
cactggaaccccagcgggaggatcggcctccggctggaggcctacgggtgtccttacacc
tcccacgtcctgagcttggacggcagcagcacgggcctggcgtacagacggagcccggcg
gcaccggggtcggtcggagacgtcgtctccatggagttcaaaaccctgaggaactctggg
acgctgctgcgggcggagggggggggaggactcggcctcagcctgcagctggagagaggg
acgctgctgctgctcacgcgaggtcctgcgtcctctgagccccggcgcgtcgcctccctc
ggcagcctgttggacgaccagcactggcaccgcgtggcggtggagtggcgcggctctcag
ctcaacgtcacggtggacgagcacacggagcgggttcgaatccccgcggagttcggcagc
tgggacgcggagcagctgagcgtagggacagtgtcgagcccggatgtctccgagaggaac
tttcacggctgcttggaaaaccttcagtacaacggcctcaacctgatagaattagcccaa
aacaaagatctccgagtggctgtaaggggcaacgtgaccttttcttgtgctgagtcggtt
tccgtcgccgtgacgttcccgggtccccagagcttcctccggttgccgtgggcgacatcg
tccctgtcgaagggcgtgtccgtcgggttccagttcaggacgtggaacgacgcagggctt
ctgctcacctttgacctgcccgagggagggggcgtggtctggttgtacctgagcgaggcc
agactccgcctgcagatccataaagacggccgggtgccgctggagctcagtgcaggttcc
gctctgaatgacgggcagtggcattcggtgacgctgacctccagcagaggtcgtctgagc
atcggcgtggacgcagaggaaggaggcagcgcccaagccgctacctcgtaccctgtcgca
gtagaaagtcacctgttctttggtggttgtcctgctgagaacaacgagccgaggtgcaga
aaccccttcagcgttttccagggctgcatgcgtctcctcgtgctgaaccacctcatggtg
gacctgataatggtgcagaagaagcagctggggatcttcagccacctgcagatcgacatg
tgtgggatcatcgacaggtgctcgcccagtcgctgtgagcatggcggccgctgcagtcag
tcctggaccgtcttccgctgtaactgctccgcgagcggctacagcagcgcgacctgccac
agctctgtgtacgaaccgtcctgtgaggcgtacaaacacaacggcaacacgtcgggacac
ttttatatcgacgtggacggcagcggaccaatcagaccgcagctggtctactgcaacatt
acagaggagaacacgtggatggagatccagcacaacaacacggagctgaccagagtccgg
ccgtctccggctgcacgccagcatttacttcacttcaactactccactgaagaggagcag
ctattggccgccatcagccaatcagagcactgccaacaggagctgtcctaccgctgcagg
aagtcccgcctcctcaacactccagagggctctccgttcagctggtggctcgggggtccc
ggtcccggtcgggtccagacctactggggcggcgctcagccgggcagccggcagtgtgca
tgcggcctgcagggcgactgcgtggacccgcagcactactgcaactgtgacgccgaccgc
gccgagtgggcggaggactcgggcctgatcacccataaggagaacctccccgtcaggtca
ctggtgctgggcgacgtccagagggccgagtcggaggccgcctaccgggtggggccgctc
cgttgccacggagacaagaacttctggaacgccgccttcttcgacaaggagacgtcgtac
ctccacttccccaccttccacggagagctgagcgcagacatctccttcctgttcaaaacc
acggcctcctccggggtcttcctggagaacctgggcatcaaagacttcatccggatcgaa
ctgagctcctccacccgggtggtgttctccctggacgtcggcgacgggccactggaggtc
ggtgtggattcgggcgtccccctgaacgacgaccggtggcaccgggtccgggccgagcgc
aacgtcagggaggcgtcgctccgcctggacggacttcctgtggcggcgcgggaggccccc
gccgacggacacctccacctgcagctcaacagccagctgttcatcggcggcacggcgtcc
aggcagaagggcttccgcgggtgcatccgcgccctgcggctgaacggcgtcgccctggac
ctggaggagagggcgaggatcacgccgggcgtccgggccggctgcccgggccactgcggc
agctacgggtcgctgtgccggaaccggggccgctgtgccgagagggccaacggcttcctg
tgtgactgcggcctgtcggcgtacaccggagccttctgtcacacagaggtgtcggcccgc
ttcctgccggggacgaccgtgagctacaccttcaggcagccgcgtgggtcggggcggaac
agcagcgcccggccctcctccatctactccgacaccaccctgagaggagaggacgtctcc
ctgagcttcaggaccacccagagtccggctctgctgctctacgtcagctcgcaccacggg
gagtccctggccctgctcatcaacaagcacgataagctggaggtgagatacaagctggac
ggcagcagaggcgccgaggtgctgaggagcgccgcgaggagcctggcggacggacgactc
cacgccgtctccgtcaggaggcggaaggacgctgtgtccctgcagatcgaccaaagtccc
agagaagacttcaacctgacatctgatggagagttgaacggcatcacgtcgctggtcttg
ggcagagtgcacgggacggacgcggtggagccgcagctgtcccgcttggcgtccctgggc
ttcacgggttgtctctcggtggtccgcttcaactccatcagccccctgaaagccgctctg
ctccacccgcacagcagccccgtcgtcgtcaccgggccgctggtccggtccagctgcggc
tcctcggcttcggccaatccccacgcggtggaggacacgcgccgcctgtcagaccagtct
ggttcagtgggttcaggtcagcctttagtcaattccatcgggaccgactcggctctgatt
ggaggtgtcatagcggcggccgtcttcgtgatggccagcggcctggcgatcggcggcagg
ttcctgtaccgccggaaagagacgtaccggagccaggaggcggagggggtcaaacgggag
gacagccaagatttcgctttcaccgaccagagggactcccagagcgtctccaccgaaaag
ccaaaggagtacttcatctga
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