Pungitius pungitius (ninespine stickleback): 119209370
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Entry
119209370 CDS
T07626
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119209370
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
119209370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
Motif
Other DBs
NCBI-GeneID:
119209370
NCBI-ProteinID:
XP_037314552
LinkDB
All DBs
Position
15:199695..256279
Genome browser
AA seq
1329 aa
AA seq
DB search
MDSRSHSRSHPRSHSRSHPRSHSRSHPRSHSRSQGAAGIIAHVALLLCSSCGTTGEEVCD
ATLVSNLPPASFRSSSQLSSSHAPGFAKLNRRDGAGGWSPLTSDRYQWLQVDLGQRTKIA
AVATQGRYGSSDWLTSYLLMFSDTGHNWKQYRQEDSVGSFPGNSNADSVVQYKLQQPATA
RFLRLLPLHWNPSGRIGLRLEAYGCPYTSGVLSLGGGGLVYGLSPAPRRSSRDVVSLEFK
TTRSSGTLLQAEGGGGLALSLEVERGTLLLLTRGPASSEPRRVASLGSLLDDQHWHRVAV
ERRGSQLNVTVDEHTERVRIPAEFGSWDAEQLSVGALRGLVSERNFRGCLENLEHNGLDL
VELLKNKDRRVTAVGNVTFSCAESVSVAVTFPGPQSFLRLPWATSSLSEGVSVGFQFRTW
NDAGLLLTFDLPEGGGVVWLYLSEARLRLQIHQAGRAPLELSAGSALNDGQWRSVELTSR
RGRLTIAVDDEEEGVAHAGHPVSAGSQLFFGGCPAAEDTQDCKNPFGLFQGCMRLLRLED
QPVDLIKVQQRLLGNYSHLQIDMCGIIDRCSPSRCEHGGRCSQSWTVFRCNCSASGYSGA
TCHSSVYEPSCEAYKHNGNTSGHFYIDVDGSGPIRPQLVYCNMTEENTWMEIQHNNTELT
RVRPSPGVEQHSVHFDYSTEEEQLLAAISQSEHCEQALSYRCRKSRLLNTPEGSPFSWWL
GGPGPGRVQTYWGGAQPGSRQCACGLQGDCVDPQHYCNCDADRAEWAEDSGLLTHEESLP
VRALVLGDIQRAGSEAVYRVGPLRCHGDKNFWNAAFFDKETSYLHFPTFHGELSADISFL
FKTTASSGVFLENLGIKDFIRIQLSSSTRVVFSLDVGDGPLEVGVDSGVPLNDDRWHRVR
AERNVREASLRLDGLPVAAREAPPDGHLHLQLNSQLFIGGTASRQKGFRGCIRALRLNGV
ALDLEERARITPGVRAGCPGHCGSYGSLCRNRGRCAERANGFLCDCGLSAYTGAFCHTEV
SARFLPGTTVSYTFGQPHESGRNSSARPSSIYSDTTLRGEDVSLSFSTTQSPALLLYVSS
HHGESLALLINKHEALEVRYKLDASRGAEVLSSAARSLADGRLHAVSLRRRTDAVSLQID
QRPKEVFNLTADGEFNAIKSLVLGRVHDPEDVDPDLSRLASLGFTGCLSVVRFNPVSPLK
AALLHPHSSPVVVTGPLVRSSCGSSASANPHAAEDTRRLSDRSGSVGSGQPLVNGVRTDS
ALIGGVIAAAVFVMASGLAIGGRFLYRRKETYRSQEAEGVKREDSQDFAFTDQRDSQSVS
TEKPKEYFI
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggattctaggagtcattctaggagtcatcctaggagtcattctaggagtcatcctagg
agtcattctaggagtcatcctaggagtcattctaggagtcaaggagccgctgggattatc
gctcacgtcgcgctgctcctctgcagctcgtgcgggacaaccggagaagaggtgtgcgac
gccacgctggtgtccaatctgccgccggcgtccttcagaagctcctcccagctgtccagc
agccacgcgccgggcttcgccaagctcaacaggagggacggcgccggaggctggtctcct
ctcacctcggacaggtatcagtggctgcaggtcgacctcggccaacggaccaagatcgcc
gccgtcgccacgcagggccgctacggcagctccgattggctgacgtcgtacctgctgatg
ttcagcgacacggggcacaactggaaacagtaccggcaggaggacagcgtcgggtctttt
ccaggtaacagtaacgcagacagcgtggttcagtacaaactgcagcagccggcgaccgct
cgcttcctgaggctcctccccctgcactggaaccccagcgggaggatcggcctccggctg
gaggcctacgggtgtccttacacctctggcgtcttgagcctggggggcggcggcctggtg
tacggcttgagtcccgcgccgcggcgctcgtccagagacgtcgtctccctggagtttaaa
accacgaggagctctgggacgctgctgcaggcggagggggggggaggactcgccctcagc
ctggaggtggagagagggacgctgctgctgctcacacgaggtcctgcgtcctctgagccc
cggcgcgtcgcctccctcggcagcctgttggacgaccagcactggcaccgcgtggcggtg
gagcggcgcggctctcagctcaacgtcacggtggacgagcacacggagcgggttcgaatc
cccgcggagttcggcagctgggacgcggagcagctgagcgtcggggcgctccgaggcctc
gtctccgagaggaacttccgcggctgcctggagaacctcgagcacaacggcctggacctg
gtggagttgttgaagaacaaagaccgccgggtcaccgccgtgggcaacgtgaccttttct
tgtgctgagtcggtttccgtcgccgtgacgttcccgggtccccagagcttcctccggttg
ccgtgggcgacatcgtccctgtcggagggcgtgtccgtcgggttccagttcaggacgtgg
aacgacgcggggcttctgctcacctttgacctgcccgagggagggggcgtggtctggttg
tacctgagcgaggccagactccgcctgcagatccatcaagccggccgggcgccgctggag
ctcagtgcaggctccgccctcaatgacggccagtggcgctcagtggagctgacctcccgt
cggggtcgtctgaccatcgccgtggatgacgaggaagagggcgtcgcccacgctggccac
cccgtctccgcagggagccaactcttcttcggtggttgtcctgctgcagaagacactcag
gactgtaagaatcccttcggcctctttcaaggctgcatgcgtctcctcagactggaggac
cagccggtggatctgatcaaggtgcagcaaagactgctgggaaattacagccacctgcag
atcgacatgtgcggcatcatcgacaggtgctcgcccagtcgctgtgagcatggcggccgc
tgcagtcagtcctggaccgtcttccgctgtaactgctccgcgagcggctacagcggcgcg
acctgccacagctctgtgtacgaaccgtcctgtgaggcgtacaaacacaacggcaacacg
tcgggacacttttatatcgacgtggacggcagcggaccaatcagaccgcagctggtctac
tgcaacatgacagaggagaacacgtggatggagatccagcacaacaacacggagctgacc
agagtccggccgtctccgggagtcgagcagcactcggttcacttcgactactccactgaa
gaggagcagctattggccgccatcagccaatcggagcactgcgaacaggcgctctcctac
cgctgcaggaagtcccgcctcctcaacactccagagggctctccgttcagctggtggctc
gggggtcccggtcccggtcgggtccagacctactggggcggcgctcagccgggcagccgg
cagtgtgcatgcggcctgcagggcgactgcgtggacccgcagcactactgcaactgtgac
gccgaccgcgccgagtgggctgaagactcgggcctgcttacccacgaggagagcctcccc
gtccgggctctggtgctgggtgacatccagcgggcgggttcagaggccgtctacagagtg
ggaccgctgcgttgtcatggagacaagaacttctggaacgccgccttcttcgacaaggag
acgtcgtacctccacttccccaccttccacggagagctgagcgcagacatctccttcctg
ttcaaaaccacggcctcctccggggtcttcctggagaacctgggcatcaaagacttcatc
cggatccaactgagctcctccacccgggtggtgttctccctggacgtcggcgacgggccg
ctggaggtcggcgtggattcgggcgtccccctgaacgacgaccggtggcaccgggtccgg
gccgagcgcaacgtcagggaggcgtcgctccgcctggacggacttcctgtggcggcgcgg
gaggccccccccgacggacacctccacctgcagctcaacagccagctgttcatcggcggc
acggcgtccaggcagaagggcttccgcgggtgcatccgcgccctgcggctgaacggcgtc
gccctggacctggaggagagggcgaggatcacgccgggcgtccgggccggctgcccgggc
cactgcggcagctacgggtcgctgtgccggaaccggggccgctgtgccgagagggccaac
ggcttcctgtgtgactgcggcctgtcggcgtacaccggagccttctgtcacacagaggtg
tcggcccgcttcctgccggggacgaccgtgagctacaccttcgggcagccgcacgagtcg
gggcggaacagcagcgcccggccctcctccatctactccgacaccaccctgagaggagag
gacgtctccctgagcttcagcaccacccagagtccggctctgctgctctacgtcagctcg
caccacggggagtccctggccctgctcatcaacaagcacgaggcgctggaggtccggtac
aagctggacgccagccgaggcgccgaggtgctgagcagcgccgcgaggagcctggcggac
ggacgtctccacgccgtctccctcaggaggcggacggacgccgtgtccctgcagatcgac
caaagacccaaagaagtcttcaacctgacggccgacggcgagttcaacgccatcaagtcg
ctggtgctgggccgagtgcacgacccggaggacgtggacccggacctgtcccgcttggcg
tccctgggcttcacgggttgtctctcggtggtccgcttcaaccccgtcagccccctgaaa
gccgctctgctccacccgcacagcagccccgtcgtcgtcaccgggccgctggtccggtcc
agctgcggctcctcggcttcggccaatccccacgcggcggaggacacgcgccgcctgtca
gaccgctctggttccgtgggttcgggtcaacctttggtcaacggcgtccggacggactcg
gctctgatcggaggtgtcatagcggcggccgtcttcgtgatggccagcggcctggcgatc
ggcggcaggttcctgtaccgccggaaagagacgtaccgcagccaggaggcggagggggtc
aaacgggaggacagccaagattttgctttcaccgaccagagggactcccagagcgtctcc
accgaaaagccaaaggagtacttcatctga
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