KEGG   Pungitius pungitius (ninespine stickleback): 119209446
Entry
119209446         CDS       T07626                                 
Symbol
kdm4ab
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ppug03036]
    119209446 (kdm4ab)
Enzymes [BR:ppug01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     119209446 (kdm4ab)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     119209446 (kdm4ab)
Chromosome and associated proteins [BR:ppug03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    119209446 (kdm4ab)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 JmjN PHD_2 zf-HC5HC2H PHD Tudor_5 DUF7141 Rad9_Rad53_bind
Other DBs
NCBI-GeneID: 119209446
NCBI-ProteinID: XP_037314710
LinkDB
Position
15:complement(8930135..8944045)
AA seq 1201 aa
MPLTALSINYEVFTTQRNTVLVNREAVELPLTATMASGVISQNNGSKGIMTFYPTPEEFK
NFSRYIAYVESQGAHKAGLAKIVPPKEWKPRSSYDDIDDLVIPAPIQQVVTGQSGLFTQY
NIQKKSMTVREFRKMANSDKFCSPHYDDFEELERKYWKNVTFNPPIYGADVNGSLYGPDV
KEWNICHLDTILDTVERESGITIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEP
KSWYCVPPEHGKRLERLAKGFFPGSSQNCEAFLRHKMTLLSPSILKKYGIPFEKITQEAG
EFMVTFPYAYHAGFNHGFNCAESTNFATERWIEYGKQAVLCSCRRDMVKISMDVFVKKFQ
PDRYEQWLAGRDVSPIDHTRPTPEAKEFLGESFTAAASCGDDGERKSTQRIETKRHRVCL
EVPDEVVPKDEDEDGAQQYGKRPRLILIPPRTTAQDGKRNKGPPKLVVTPNKLTLLDPFH
RSLTQSNCDVGRPPHYTKTRAPAISAQSQPRNRYLSVSATPSWTEATAQPARKMGVASLL
FHKTLSSKDALQVHSYTMEKQQQQQHSHTQLQVHSYAQEHQPRHLQHKSCTSSHAQVQPS
PQTESKTRLTIGAPNQSETEVFVELGQKEEKPEITMPAEAQAEVRKPESEPTRYSAAAWT
EKHLETSRTTIDTSTKRQSNQSPLVDRGIVVLNETIPIEKPICDEVEVIPHNHQVSEEQS
YCMSVVEKQQQQPQLCKLPRHHPLIREVHSDNEEFMDEEFEQEEKEEWAKPLTQLWQCRP
YNPEVEREYNKSLAQQEPYCSICLLFYTYHQSESSSGSSSVTLVNRPGGRQWSKPLIPEM
CFNTQSSRTNDNGEGQLSNPHVAEDGTSRLVSCAQCCVRVHTSCYGVPGDESELDDWLCS
RCEADATTEDCCLCSLRGGALQRANNDKWVHVLCAITVLEARFVNVAERGPVDLSAIPLP
RFKLKCAYCRKRMKREVKGCCVQCSHGRCSTAFHPTCAQAAGIVMNPDDWPFTVFITCHR
HKVPGIPERNKAPMRELAVGQRVICKYKNGRYYHSEVVELTTATFYEVVFDDGSYSNNLF
PEDIENRDCARLGPPTEGDAVQVRWTDGLIYGAKFLASHSIPMYLVEFEDGSQITVKRED
IYTLEENLPKRVKSRMSVASDMRFELFSQSNVKQNSKRQRVINSRYREDYIEPVIYRAIM
E
NT seq 3606 nt   +upstreamnt  +downstreamnt
atgccgctaactgctctttctattaattacgaggtatttacaacgcaaaggaatacagtc
ttagtcaacagagaggcggtggagctgccattgacagccaccatggcgtcgggtgtgatt
tcccaaaacaatggttccaaggggatcatgactttttaccccaccccggaggaattcaag
aacttcagccgctacattgcctatgtggagtcccaaggagcacacaaagcaggcctggca
aaaattgttccaccaaaagaatggaagcccagaagctcttatgacgatatagacgatttg
gtgatccccgcacccatccagcaggttgtgacgggccagtcgggccttttcacacaatac
aacattcagaagaagtccatgactgtgagagagtttcgcaagatggccaacagtgacaag
ttctgtagtccacattatgatgactttgaagagctggaaagaaagtattggaagaatgtg
acatttaaccctcccatatacggggccgatgtgaatggatctctatatggccccgacgtc
aaagaatggaacatttgccacctggacactattttggatacagtggaacgtgaaagcgga
atcactattgagggtgttaatacaccctacttgtattttggcatgtggaagaccaccttt
gcatggcacactgaggacatggacctctacagtatcaactacttgcattttggagagccc
aaatcatggtactgtgttcctccagagcatgggaaacgattggagcgcttggctaaaggg
ttctttcctggtagttctcaaaattgtgaggcctttttaaggcacaagatgacactcctc
tctccatcaatacttaagaagtatggcattccgtttgaaaagattactcaggaggccggt
gagttcatggtgactttcccctatgcctatcatgctggtttcaaccacggtttcaactgt
gcagaatccaccaactttgccactgagaggtggatcgagtacgggaagcaagctgttttg
tgctcatgccgtagagacatggtgaaaatttctatggatgtatttgtaaagaagttccag
ccagatcgctatgagcagtggctggcggggcgagatgtgtcacctattgaccacacgcgg
cccaccccagaagcaaaggagttcttgggagagtcctttaccgccgcggcgagttgtggg
gatgatggcgagcgtaagagcacacagaggatagagacaaagagacacagagtctgtctg
gaggtgcccgacgaggttgttcccaaagatgaagatgaggacggtgcacagcagtatggg
aagcgtcccaggctaatcctcatacctccacgtactacggcacaagatggcaagagaaat
aaagggccaccaaagttggttgtcacgccaaacaagctcaccctattggatccatttcac
agaagcctaacccaaagtaactgtgatgtaggccgccctccacattataccaagacgcgc
gcacctgccatctcagcgcagtcccagcccagaaaccgatatttatccgtttcagcaaca
ccttcctggaccgaagccactgctcagcctgcccgtaaaatgggggtggccagcctgctc
ttccacaaaactttgagttcaaaagatgctcttcaggtgcacagctacactatggagaag
cagcagcagcagcagcattctcacacacagctgcaggtgcacagctatgctcaagagcat
caaccccgtcacctgcagcacaaaagctgtacctcatcacacgcacaggttcagccctcg
ccacagacagaatccaagactaggctcaccatcggagcaccaaatcagtcggagacagag
gttttcgtagagctgggacaaaaggaggagaaaccggaaataacaatgcccgcagaggct
caagctgaagtaaggaagccagaatctgagccaacgaggtactctgctgccgcgtggaca
gaaaagcatctcgagacaagcagaacaacgattgacacgtccaccaagagacagagtaac
cagtcccccctcgtggatcgtggcattgtcgtcctgaatgagaccattcctatcgagaaa
ccaatctgtgacgaggtggaggtaatccctcacaatcaccaggtgtcagaagagcaatcc
tactgcatgtcagtggtggagaagcagcaacagcagccccagctgtgcaagctgcctcgc
caccaccctctaatcagggaggtgcacagcgacaatgaagagttcatggatgaggagttt
gagcaagaggagaaagaggagtgggcaaagccattaacacagctgtggcagtgtcgcccg
tataaccctgaggtagagcgagagtacaacaagagcctggcccagcaggaaccctactgc
tccatctgcctgctcttctacacctaccatcagtctgaatccagtagtgggagttccagc
gtgacgttggtgaaccgtccaggcggacgccagtggtccaagccactcatccctgaaatg
tgtttcaacacccaatccagcaggacgaatgacaacggcgaggggcagctgtctaaccct
catgtagcagaggacggcaccagccggctggtcagctgtgctcagtgctgcgtccgcgtg
catacaagttgctatggggtacctggggatgaaagtgaacttgatgactggctgtgcagc
cgttgtgaggctgatgccaccacagaggactgctgtctgtgttccttgagggggggagct
ctgcagagagctaacaatgacaagtgggttcatgtgttgtgtgccatcactgtgctggaa
gctcgctttgtgaatgttgctgagcgaggcccagtggacctctctgccatcccactgcct
cggttcaaactgaagtgtgcatactgcaggaaacggatgaagcgggaggtgaagggctgc
tgtgtccagtgctcccacggccgctgctcaacggcatttcacccaacctgcgctcaggca
gcaggaatagtcatgaacccagatgactggcccttcaccgtcttcatcacctgccacaga
cacaaagtgcccggcataccagagcgcaacaaggcgccgatgcgtgagctggcagtcggg
cagagggtgatctgcaaatacaaaaatggccggtactaccacagcgaggtggtggagctg
accaccgccaccttctacgaggttgtgttcgacgatggctcctacagcaacaacctcttc
ccagaggacattgagaaccgggactgcgcccggctcggtccccccactgaaggcgatgca
gttcaagtgcgatggacagacgggttgatatatggagcaaagtttttggcgtcgcactcc
atccccatgtatctggtggagtttgaggatggatcccaaatcactgtcaagcgagaagac
atctacactctagaggagaaccttcccaagcgggtcaagtcccgaatgtcggtggcgtca
gacatgcgctttgagctcttctctcagagcaacgtcaaacagaactccaaaaggcaacgg
gtcatcaactctcgctacagggaggactacatcgagccggtcatttaccgagccatcatg
gagtga

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