Pungitius pungitius (ninespine stickleback): 119209506
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Entry
119209506 CDS
T07626
Symbol
irf4a
Name
(RefSeq) interferon regulatory factor 4a isoform X1
KO
K09445
interferon regulatory factor 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119209506 (irf4a)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
119209506 (irf4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
119209506
NCBI-ProteinID:
XP_037314808
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All DBs
Position
15:complement(7078660..7086105)
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AA seq
465 aa
AA seq
DB search
MINEMNLDEDTGLSVSSGNGKLRQWLIDQIDSGLYPGLVWENHEKSIFRIPWKHAGKQDY
NRDEDAALFKAWAMFKGKHKEGIDKPDPPTWKTRLRCALNKSNDFDELVDRSQLDISDPY
KVYRIIPEEAKRGMKINLEETPSHINPLGYIPPYPSSHDQASGYMASQERRDWRDYSPSE
QQPLAPPHQHGSHAELQYGQFHYPSSFSRPWPGSQSENGFHLSFHTYFSESQPPVYSINQ
NNGITDSSLHVSLYYRESLVKEVTTTSPEGCRIASHSSSPPSSSSSSSPCPEDKFHSGAE
MILFPFPYPESQRQGADMLPSVLERGVLLWMAPDGLYAKRLCQGRVYWEGPLAPFMDKPN
KLEKEQPCKLFDTQQFLIELQEFAHNGRHLPRHQVVLCFGDEYPDPQRPRKMITAQVEPV
FARKLVYYYQQNNGHYLRAFDHLLEQNPPTTTDYQSQRPLQHIQE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgagatgaaccttgatgaggacactggcctgtcagtcagctccggcaatggg
aaattgagacagtggctgattgatcagatcgacagcgggttgtatcccggcctggtctgg
gagaatcacgaaaagagcatctttaggattccgtggaaacatgcagggaaacaggactat
aacagagacgaggatgcagcgctcttcaaggcgtgggcaatgtttaagggaaaacataag
gagggaatcgataaaccagatccccccacatggaaaaccagactacgctgtgctcttaat
aagagcaacgactttgatgagttagtggataggagccagctagacatctcggacccctat
aaagtctacagaatcatcccagaagaagccaaaagaggaatgaagataaacctggaagag
acaccatcccatataaatccacttggctacattccaccgtacccgtcttcccatgaccag
gcctccggctatatggcgtctcaggagagacgggactggagggattactccccctcagaa
cagcaacctcttgctcctccacatcagcacgggtcacatgcggagctgcagtacggtcag
ttccactacccatcatcgttcagccggccttggcccgggtcacagtccgaaaacggtttt
catctttccttccacacctacttttcagagtcccaaccacctgtgtattcaattaaccaa
aacaatggcataacagattccagcctccacgtgtccctgtactacagagagtctttggtg
aaggaggtcaccaccaccagcccagaaggttgtcggatcgcctctcattcctcctctcct
ccgtcctcttcttcctcctcttccccgtgcccagaggacaagtttcacagcggggcagaa
atgatcctttttcccttcccctacccggagtctcagcggcagggtgctgacatgcttccc
agcgtgctggagaggggggtgcttctgtggatggctcccgacgggttatacgctaagcgc
ctctgccagggacgggtttactgggaaggacccctggctccttttatggacaaacccaac
aagctggagaaagagcaaccgtgcaaactgttcgacacccagcaattcctgattgagctt
caggagtttgcccacaatggccgacatttaccgagacaccaggtggtgctgtgttttgga
gacgagtaccccgaccctcagcgcccaaggaagatgatcacagcacaggtagagccagtg
tttgccagaaaactggtgtactattaccagcagaacaatggccactacctgcgggctttt
gatcacctcctggaacagaatccacccacaacaaccgactatcagtctcagagaccgtta
cagcatattcaggagtga
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