Pungitius pungitius (ninespine stickleback): 119209616
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Entry
119209616 CDS
T07626
Name
(RefSeq) LOW QUALITY PROTEIN: latent-transforming growth factor beta-binding protein 4-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119209616
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
119209616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
FXa_inhibition
Plasmod_Pvs28
EGF_3
hEGF
EGF_2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
119209616
NCBI-ProteinID:
XP_062413743
LinkDB
All DBs
Position
15:16509801..16529744
Genome browser
AA seq
1004 aa
AA seq
DB search
MLQPGLRCFLSSVLMVFVSPLPAEGQTVSGGRGVERLQVMFTPTVCKVRCSQGRCVNYCE
HGNVTTLYSGIEGGGGGGGGGRRESSHGPGFRVFVCPMLCKNGGVCLQKDRCLCPQGFSG
KFCQVPIASSSTKDIVKPALLTAMEANQELTQSEFLLPLRPSQETGVSGAPGPSMVQVRA
QHPPQTRAILHQVQTVSRSSPALRTLSSGSAGAPAPAGVQAQTVRGGGTISQQAGFKYCF
REVKEGQCSSPLPGLRSKDICCQGIGKAWGTTECVLCPDTTGQSNSSCPAGFERANGTQC
VAQSVISEEKGQCHRLLGSGRGPTSCSLPILRSITKQICCCSRVGRAWGPDCQRCPHFGS
VAFKETCPAGPGYHYSASALQFNQRTTEQLGARGASLVTPGNHGNHGPGSGSGTGGSSSS
GSSTNGSSRSQQRGTADESKTSSGGTSRHSPAPFHPRQDDSTSTVTGDKVQSAGRPVTQQ
NGPHLARPFTPGPRPPSAGSQGGGRSSSASTREDPLPPPARPLSPERPTTTPQARVQMLR
GVCESTPGVCGPGVCVQQPGGTHTCVCDEGHQLDPQRTFCRDVNECVQSAGVCAGGECVN
TLGSFKCICSTGYKSNSQQAGCQDVDECEDALQCPGQQCINTQGSYRCVSCRHGYGLLNG
VCTDVDECQHSPCSSGRCVNTPGSYHCVCRHGXRLQNNTCTDVDECAEPSQCPGQMCVNS
VGLYRCTSCGPGHTLTNRQCTDDYASLCTSFLPPLFPESFSDSGPEPGVRPGGRGRGGVR
ESSPPYFPPYSPDSFPPAVAPDYEDYSPAGGSSSVFRGRTPVSYQGPDFRPPSFRPPPDP
RAERAFGARPPSPSRPDGPPISLAPLPGAPYQVEQEEEEEGWWRRPPPFPPFTERREGGA
PRRLYERRYESYAGLSAAEDCGILHGCENGRCIRVAEGYTCDCYQGYGLDMTSMTCTDLN
ECEASVPLDFPCVNARCVNTAGSFRCVCRRGYVMSRRPNHCVAA
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcctggactccgctgctttctgtcctccgtcctcatggtcttcgtgtctccg
ctgccagctgaaggacagacggtgtcgggaggcagaggtgtggagaggcttcaggtgatg
ttcacgcccaccgtctgcaaggtgcgctgcagccagggccgatgtgtcaactactgcgag
catggaaacgtgaccactctgtacagcggcatcgaaggaggaggaggaggaggaggagga
ggaaggagagaaagctcccacggacctggcttcagagtgttcgtctgccctatgctctgt
aagaacggaggcgtctgtctgcagaaggaccgatgtctctgcccgcaaggcttcagcggg
aagttctgccaggtccccatcgcctcctcctccaccaaagacatcgtcaagccggcgctg
ctcaccgccatggaggccaatcaggagctgacacagtcagagttccttctaccgctgaga
cccagccaggagacaggtgtctctggagctcctgggccgtccatggtgcaggtcagagcg
cagcaccccccccagaccagagcgatcctccaccaggtgcaaacggtgtcccggtccagc
cccgccctgcggacgctctcctccgggtcggcgggcgccccggctccagcgggggtccag
gcccagacggtgagggggggcggcaccatcagccagcaggccggcttcaagtactgcttt
agagaggtgaaagaggggcagtgcagctctcctctgcccggtctgcggagcaaggacatc
tgctgccaaggcatcgggaaggcctggggtactacagagtgtgtactctgccctgatact
acaggtcaaagcaacagcagctgcccggctggttttgagcgagccaatggaacgcagtgt
gtagcccagagtgtgatctcggaggagaagggtcagtgtcaccggctcctgggctcgggt
cgcggtccgacctcgtgctcgctgcccatcctccgcagcatcaccaagcagatctgctgc
tgcagccgggtgggacgggcctgggggccggactgccagaggtgcccccacttcggttca
gtggcctttaaggagacctgtccagccggtcccgggtaccactactcggcttcggccctg
cagttcaaccagagaaccaccgagcagctgggggcccgaggagcttcgctggtgaccccc
ggtaaccacggtaaccacggtcctggttctgggtccggtaccggcggatccagttccagt
ggatccagtaccaacggctcctccaggtctcagcaaagagggacagccgatgaatcaaaa
accagttctggcgggaccagcagacacagtccagctccgttccacccccgccaagacgac
tctacctcgacagtcaccggggacaaagtccagtctgcagggagacccgtgacccagcag
aacgggccccacctcgctcggccattcacaccgggacctcggcccccatccgccggtagt
caaggtgggggccggtcctcctccgcgtccaccagagaggaccccctccctcctccggcc
cgacccctcagcccagagcgccctacgacgaccccccaggcccgagtccagatgctgcga
ggtgtgtgtgagagcacacctggtgtgtgtggcccaggtgtgtgtgtgcagcagccagga
gggactcacacctgtgtgtgcgatgaaggacatcagctcgacccccagcgcaccttctgc
cgagatgtgaacgagtgtgtgcagtcggcaggtgtgtgtgctgggggagagtgtgtgaac
actctgggaagcttcaagtgtatttgttcaaccggatacaagagcaacagccagcaggcc
ggttgtcaagacgtggacgagtgtgaggacgctcttcagtgccctggtcagcagtgcatc
aacactcagggttcttaccgctgtgtctcctgtcgtcatggatacggactgctcaacggg
gtctgcacagacgtggacgagtgtcagcattctccctgctccagcggccgctgtgtgaac
acccccgggagctaccactgcgtctgtcgccatggttaaaggctgcagaacaacacctgc
acagatgtagatgagtgtgcagagccgtctcagtgtcccggtcagatgtgtgtgaactct
gtggggttgtaccgctgtacgtcctgtggaccaggtcacacactcaccaataggcagtgc
acagatgactacgcttccctctgcacctccttccttcctcctctgtttccggagagcttc
tcggactctggaccagaacccggagtgagaccaggaggacgaggacgaggaggagtcaga
gagtcatctcctccctacttccctccctacagtcctgactccttccctcctgctgtggcc
cccgactatgaggactactccccagcagggggcagcagctcggtcttcagagggaggaca
cctgtctcctatcaggggccagacttcaggcccccgtccttccgccctccccccgacccg
cgggctgagagggcgtttggggctcgtcccccctccccgtcccgacccgacgggcctccc
atcagcctggcaccgctgcccggagctccttaccaggtggagcaggaggaggaggaggag
ggatggtggaggaggcccccccctttcccccccttcactgagaggagagaaggaggagca
ccgaggaggctctatgagaggcgctatgagtcgtacgcgggcctgagtgcagcagaggat
tgtgggatactgcacggctgtgagaacggaaggtgtattcgcgttgctgagggttacacg
tgtgactgttaccaaggatacgggctggacatgacctccatgacatgtacagaccttaac
gagtgcgaggcctccgtcccgctggacttcccctgtgtgaacgctcgctgtgtgaacaca
gctggttcgttccgatgcgtctgcaggagaggctacgtcatgtcccgcaggcccaaccac
tgcgtggctgcctaa
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