Pungitius pungitius (ninespine stickleback): 119209622
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Entry
119209622 CDS
T07626
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
KO
K17302
coatomer subunit beta'
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119209622 (copb2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119209622 (copb2)
Membrane trafficking [BR:
ppug04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
119209622 (copb2)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
119209622 (copb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
CDPS
Motif
Other DBs
NCBI-GeneID:
119209622
NCBI-ProteinID:
XP_037314955
LinkDB
All DBs
Position
15:9536832..9543860
Genome browser
AA seq
932 aa
AA seq
DB search
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRQVKIWDYQNKTCVQTLEGHAQNVSCVSFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVCGLRGSNNVALGYDEGSIIIKVG
REEPAMSMDANGKIIWAKHSEIQQANLKAMGDTEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSIVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELVRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYMSEKVAASQENNEGVTEDGIEDAFEVQGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIAKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AAEAEAEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVGKLAEGAE
RDGKNNVAFMTYFLQGNLDQCLELLIRTNRLPEAAFLARTYLPSQVSRVVKLWRENLAKV
NTKAAESLADPTEYENLFPGLREAFSAEHYLRESCLGTSRPAKDYPLVTLNEDRNILEEA
QGYEPKGTFIPTVAKTQDKEKLVAAPVAAAGSFSLPEPAALAAVDREEQEEIPELTQSQK
ETLDELEVDLDNIELDDIDTTDVNLDDDFLDD
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaggctggacatcaagcggaggctgacggctaggtcagaccgagtgaagagt
gtggaccttcacccaactgagccatggatgctggccagtctgtacaacggcagtgtctgt
gtgtggaaccacgaaacacagactctcgtcaagaccttcgaagtatgtgacctccctgtc
agagcctctaagtttgtggcaaggaagaactgggtcataacaggagcggatgacatgcag
atcagagtgttcaactataacactttggagcgtgtccacatgtttgaggcccactctgat
tatatccgttgcattgctgtccatccgacccagccctatatcctcaccagcagtgatgac
atgttgatcaagctgtgggactgggagaagaagtggtcgtgcagccaggtgtttgaggga
cacactcactacgtcatgcagattgtcatcaaccctaaggacaacaatcagtttgccagt
gcctccctggacaggacaattaaggtttggcaactaggatcttcgtctcccaattttact
ttggagggtcatgagaaaggggtcaattgtattgactattatagtggaggagacaagccc
tacctcatctcaggggctgatgaccgccaagtaaagatctgggactatcagaacaagacc
tgtgttcagactctggagggccacgcccagaatgtctcttgcgtcagctttcatcctgag
ctgcccatcatcatcactggatcagaagacggtacggtgcgcatctggcactcaagcact
taccgccttgagagcactctaaactacggcatggagagagtgtggtgtgtgtgtggcctc
cgaggctccaacaatgtggcgctgggctacgatgaaggcagcatcattatcaaggtgggt
cgggaggagccagcaatgtctatggatgccaacggaaaaatcatctgggctaaacacagt
gagatacagcaagccaacctgaaggccatgggtgacactgagatcaaggacggagagagg
ctcccattggctgtcaaagacatgggaagctgtgagatttacccccaaaccattcagcat
aaccctaatggaaggtttgttgtggtgtgcggggatggagagtatatcatctatactgcc
atggctttgaggaacaagagctttggctccgcacaggagtttgcctgggcccatgactca
tctgaatatgccatcagagaaagcaacagtattgtcaagatcttcaaaaatttcaaagaa
aagaagtcttttaagcccgactttggagcggaaggtatctacggaggcttcctgcttggg
gtgaggtcagtgaatggcctggcattttatgactgggagaacacagagctggtccgccgc
attgagatccagcccaaacacatcttctggtccgattctggtgaactggtctgcatcgct
acagaggagtcctttttcattttgcgttatatgtcagaaaaagtagctgcttcccaagag
aataatgaaggagtgactgaggatggcattgaagatgcctttgaggtccagggagaaatc
caggagattgtgaagactggactttgggtaggggactgcttcatctacaccagctctgtg
aacagactcaactactatgtaggaggagagattgtcaccattgctcaccttgacagaacc
atgtacctgctgggttacatacccaaagatgaccgcttgtaccttggagacaaagagctg
aacattgtgagctactccctgctggtctccgtcctggagtaccagactgccgtaatgagg
agggactttggaatggctgacaaggtgcttcccacaattgctaaagagcagcggactagg
gtcgcccatttcctggagaaacagggcttcaagcagcaggcactggctgtgtccacagac
ccagaacaccgttttgagctggcgttgcagctgggagagttgaaaattgcctaccagctg
gctgcggaggctgaggcggagcagaagtggaagcagttagcggagctggcaatcagtaag
tgccaattcggcctggcccaggagtgcctgcaccacgcgcaggattacggtggccttctc
ctcctcgcaacagcctccggaaacgctacaatggtggggaagctggctgagggggcagag
agagacggcaagaacaatgtggccttcatgacctacttcctgcaggggaatctggatcag
tgcttggagctgctcatcagaactaaccggctccctgaagctgccttcctggctcgcacc
tacctgcccagtcaggtgtcacgtgtggtcaaattatggagggagaacctggcaaaggtc
aacacaaaggcggccgagtctctggcagacccaacagaatacgagaaccttttccccggg
cttagagaagcctttagcgccgagcattacctcagagagtcctgcttgggcacctctagg
cctgccaaagattaccctctggtcacgctcaatgaagacaggaatattctggaggaggct
caggggtacgagcccaaagggaccttcattccaactgttgctaagacacaggacaaggag
aagctagtggcagctccggtcgctgcagctgggtcattttcactcccggaacctgctgct
cttgctgcagtggacagagaagagcaggaggaaatccctgagttaacacagtctcaaaaa
gagactttggatgagctggaagtggacctggacaacatcgagctggatgacatcgacacc
acagacgttaaccttgatgatgactttctagatgactga
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