KEGG   Pungitius pungitius (ninespine stickleback): 119209651
Entry
119209651         CDS       T07626                                 
Name
(RefSeq) RNA-binding protein MEX3B-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppug03019]
    119209651
   04121 Ubiquitin system [BR:ppug04121]
    119209651
Enzymes [BR:ppug01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119209651
Messenger RNA biogenesis [BR:ppug03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     119209651
Ubiquitin system [BR:ppug04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119209651
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 KH_BICC1_1st zf-C3HC4 KH_2 RING_XB3-XBAT31 KH_DEAH11_2nd Prok-RING_4 zf-RING_5
Other DBs
NCBI-GeneID: 119209651
NCBI-ProteinID: XP_037314996
LinkDB
Position
15:complement(10198859..10206990)
AA seq 656 aa
MPSPLFHPEIMDHDVVISSQHNGVGLPRETDQESREDDHQEVLRFALDQLSLMALEKVDT
LDGTQGPGSEGCNGVGYVDLQMLEHPNGSQGSPTSCSPSPEYYGSGGYHMAGSHAMLHGE
QSSVLCSRKRSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFI
VTGRREDVEMAKREIVSAAEHFSMIRASRCKAGAPGGGGATGAAGGGGNGGTGSGTGSLP
GPPHLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMPE
NVDRAREEIETHITLRTGTFVDLQGDNDFHSNGTDVSLEGLSALSGGLGASLWSRATGHH
SGPPPPPPSPPPSTIPISMHHSSGRKMSSSIAYHAHNGGMSSDNFATARKANEGGSPTSP
FSTGSSSAGGGFTFGGDSTPGLPSSDELGFEFSAANIWAPFINGGSGNKTAGSAQQQPVR
RNSSGLSGGAITPRLSPTLPQDTGVGPLDHPLARRAQSDPLSTLSWLQSSSVGGGSFSGA
SSSGGSSTGYSSCSASSLPGGSPTDSEGCGSGVGLSSGMLSRLKGSSGPGVPGLVGVGPG
INRDCFVCFESEVTAALVPCGHNLFCMECAGQICQSADPECPVCHTPTTQCIRIFS
NT seq 1971 nt   +upstreamnt  +downstreamnt
atgcctagccctttattccaccctgagattatggaccacgacgtggtgatcagcagccag
cacaacggggttggtctgccccgagagacggaccaggagtcccgggaagacgaccaccaa
gaggtgcttcgcttcgccctggaccagctgtcactcatggccctggagaaggtggacact
ctggacgggacccagggaccgggatccgagggctgcaacggcgtgggctacgtggacctc
cagatgctggagcatccgaacgggtcccagggatcgccgacgtcttgttctccatccccg
gagtactacggctcgggcggataccacatggccggctcccacgccatgctccacggagaa
caaagctccgtcctctgcagcaggaaaaggagtgtcaacatgactgaatgtgtgcccgtc
cccagctcggaacatgtggccgaaatagtggggagacaaggttgtaagattaaagccctg
cgtgccaaaacaaatacctacatcaagaccccagttcgaggcgaggagccagtcttcatc
gtgacaggacgcagagaggacgtggagatggccaagcgcgaaattgtctctgcagccgag
cacttctctatgatccgggcgtcccgctgcaaagcgggagcacccggaggcggaggcgca
acaggagcagcgggaggaggaggaaacggcggcaccggcagcgggaccggctcccttcct
ggaccaccgcacttgcctggacagaccactatccaggtgagggtcccctacagagtagtt
ggtttagttgttggaccgaaaggagcaactattaagcgcatccagcagcagacccacacc
tacattgtgacaccgagcagggagaaagacccggtgttcgaggtcaccggcatgcctgag
aacgtggaccgagcgagagaggagatcgagacccacatcaccctgagaaccgggaccttt
gtggacctgcagggagacaacgacttccactcgaacggcaccgacgtgagtctagaaggc
ctgagcgccctgagcggaggactgggggcgtctctgtggtccagggccaccggccaccat
tctggccctcctcctcccccgccctccccacctccttccaccattcccatatccatgcat
cattcatccggccgcaagatgtcgtcgtccattgcctatcacgctcacaacggcgggatg
agctcagacaactttgccaccgctcgcaaggccaacgagggaggcagccccaccagcccg
tttagcacaggttccagcagtgctggaggaggtttcactttcgggggcgactccaccccg
gggcttccctcttcggacgaactgggctttgagttcagcgccgccaacatctgggcgcct
ttcatcaacggcggatcaggcaacaagacggccggctcggcccagcagcagcccgtgcgt
cgcaacagcagcggcctgagcggtggcgccatcaccccgcggctgtctccgactctgcct
caggacacgggcgtgggccccctggatcacccactagcccgccgcgctcagagcgacccc
ctcagcaccctctcctggctgcagtccagcagtgtcgggggcggctccttctcgggagcg
tccagctccggcggatcgtcgactggctactcctcctgctcggcctcctcgctgcccggc
ggctcgcccacggactccgagggatgcggcagcggcgtgggcctcagttcggggatgctg
agccggctgaaaggaagctccggccccggggtcccgggtctcgtcggcgtcggccccgga
atcaacagggactgctttgtgtgctttgagagcgaggtgacagcggccctggtgccttgt
ggccacaaccttttctgcatggagtgcgctgggcaaatctgccagtccgctgaccccgag
tgccccgtctgccacacccctaccacacagtgcatccgcatcttctcctaa

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