Pungitius pungitius (ninespine stickleback): 119209706
Help
Entry
119209706 CDS
T07626
Symbol
rhbdd1
Name
(RefSeq) rhomboid-related protein 4
KO
K09651
rhomboid-related protein 4 [EC:
3.4.21.105
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119209706 (rhbdd1)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
119209706 (rhbdd1)
Peptidases and inhibitors [BR:
ppug01002
]
Serine peptidases
Family S54: Rhomboid family
119209706 (rhbdd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
PTS_EIIC_2
DUF1751
UIM_2
Motif
Other DBs
NCBI-GeneID:
119209706
NCBI-ProteinID:
XP_037315105
LinkDB
All DBs
Position
3:complement(16183026..16188264)
Genome browser
AA seq
323 aa
AA seq
DB search
MRNRQRGSHLGLMLLASQVFQMGLDNIPPVTLAVLGLNVYLYLFPAAPLMQTCVSVQQAY
WFKDWRRLLLSPLHHADDWHLYFNMLSFLWKGTKLERRLGGPWFLYLLSVFSLITGLVYL
ALEALLTELTQDQSYSMACAVGFSGVLFALKVVSNHYHPGGVTYVMGFPVSNSYVSWVEL
VLIHITSPGTSFVGHLAGILVGLLYTAGPLKAVMKTCAGFVTLNGYSSRANAYYHSTGTT
GYSSAGGGYSGYRQSPPDYTTTRAASYAGGLTEEEQIEAAIRNSLHDRGQSSQRGAPPPY
GFRPFEEATAEDVRLRRLRRFDN
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaccgacaaaggggatcccatctgggcttgatgcttctcgcctcccaggtgttt
cagatgggcctggacaacatccccccagtcactctggctgtcctgggactcaatgtgtac
ctttacctgttccccgcagctccactgatgcagacctgtgtgagtgttcagcaggcctac
tggttcaaagactggcgccgccttctgctctccccgctacaccatgcggatgattggcac
ctctacttcaacatgctctccttcctctggaagggcaccaagctggagcgacggctgggt
ggcccatggttcctctacctgctgtcagtcttctctctgatcaccggactggtctatttg
gcgttggaggccttgttgacggagctcacccaggaccaatcctacagcatggcctgtgct
gtcggcttctcaggtgtcctgtttgctctgaaggtggtcagtaaccattaccatcctgga
ggtgtgacctatgtgatgggtttccccgtgtctaatagctatgtcagctgggtagagctt
gtgctgatccacataacatcacctgggacctcttttgtcggtcacctggcgggtatcctg
gtgggtctgctatatactgctggaccgctgaaggctgtcatgaagacatgtgcagggttt
gtaacattaaatggatatagctcccgggccaacgcatactaccactctacaggcactaca
ggctacagcagcgcgggtggaggatactcgggataccgtcagtctccaccagattacaca
acgactcgtgcagcatcttatgcaggcggactgacggaagaggagcagatcgaggcggcc
atcagaaacagcttgcatgacagaggacaaagcagccagagaggtgctccccctccttat
ggtttccgcccctttgaggaggcgacagctgaggacgtcaggttgaggagactcaggcga
ttcgacaactga
DBGET
integrated database retrieval system
