Pungitius pungitius (ninespine stickleback): 119209745
Help
Entry
119209745 CDS
T07626
Symbol
lrrc8da
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119209745 (lrrc8da)
Ion channels [BR:
ppug04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
119209745 (lrrc8da)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_9
LRR_R13L1-DRL21
LRR_5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
119209745
NCBI-ProteinID:
XP_037315173
LinkDB
All DBs
Position
15:8631936..8638427
Genome browser
AA seq
850 aa
AA seq
DB search
MMFTLTEVASLNDIQPTYRILKPWWDVFMDYLGLVMLMLAIFAMTMQITKDQVACLPCLE
DQEDPSGAKPDSFAQQSSLKAATSAATTVATLPPLVTKDLPDKAVHEIHVPQQHTVEEKY
VNQPQPTGVRTNLDYQQYVFINQICYHVALPWYSKYFPYLTLIHTIVLMVSSNFWFKYPK
TSSKIEHFVSILGRCFESPWTTKALSETACEDSEENKQRLTGTSSVPKQVSIEGKDDGTN
VNSSTPMLGVKFSADKPIAEVPSSMTILDKKDGEQAKALFEKVRKFRAHVEDSDFIYKLY
VAQTVVKTVKFILILSYTSTFLAKINFKHDCEPDIKQLTGYSKFFCTHNMAFMLNKLLIS
YMALILIYGMACLYSLFWVFRRPLKEYSFEKVREESSFSDIPDVKNDFAFLLHMVDQYDQ
LYSKRFGVFLSEVSENKLREISLNHEWTFEKLRQLVTRNAVDQQELHLFMLSGLPNAVFD
LTDLEVLKLELIPEVRFSAKVSQMTNLLELHLCHSPAKVEQTGFAFLRDHLRCLHVKFTD
VAEIPAWVYLLRSLRELNLIGNLSSENNKMIGLESMRDLRHLKTLCLKSNLTKMPTNITE
LSPHLIKLVVHNDGTKLVVLNSLKKMTNLIELELHTCELERIPHAIFSLVNLQELDLKSN
NIRTIEEIISFQHLKRLTCLKLWHNKIITIPSSIGQVKSLESLYLSHNKLECLPPSLFTL
PKLRYLDVGHNSISVLPPDVGLLHNLQHLAINSNKLEVLPKSLFRCTKLKALCLGNNALT
VLPEVAGQLVQLTQLELRGNCLDRLPVQLGNCRLLRKSGLVVEDHLFDALPVEVKENFSR
ETSASFGDGL
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcacactcactgaggttgcatccttgaatgacatccagccgacgtaccgcatc
ctgaagccatggtgggacgtctttatggattacctgggcctggtcatgctcatgctggcc
atattcgccatgaccatgcagatcaccaaagaccaggtagcctgccttccgtgtctggag
gaccaggaggacccctcgggagctaagcctgactcgttcgcacagcagagctcactgaaa
gcagcaacatcagcagccaccaccgtggcaactctccctcctctcgtcactaaggactta
cccgacaaagccgtacatgaaatccatgttccacaacaacacactgtggaagagaaatat
gtcaatcaacctcaaccgacaggggtcaggaccaacctggactaccaacaatatgtcttc
atcaaccaaatatgttaccatgttgccttgccctggtattccaagtactttccttacctc
acactcatacacaccattgttctcatggtcagtagcaatttctggttcaaatacccaaaa
acgagctcaaaaattgagcattttgtttcgattttaggtagatgctttgagtctccttgg
accacgaaggctttgtctgaaacagcttgtgaggactctgaggagaacaaacagcggttg
accggcacctctagtgtaccaaagcaagtatctatagaggggaaagacgacggcacaaat
gtcaactcatccacacccatgctcggggtgaagttctctgcagataagcccatagcagag
gtaccaagtagcatgacgatcctggacaagaaagacggtgagcaggccaaagccttgttt
gagaaagtcagaaaattccgagctcacgtggaggacagtgatttcatctacaagctttat
gtagcacagaccgttgtgaaaacggttaagttcattttgatattatcctacacttcaacc
tttttggctaaaatcaattttaagcatgattgtgaacctgatattaaacagctaacaggg
tactcaaagttcttctgtacgcataacatggctttcatgctaaacaaactgctcattagc
tacatggctttgattttgatctacgggatggcttgcttgtactctctcttctgggtgttt
cgacggcctttgaaagagtactcatttgagaaagtccgagaggagagcagctttagtgac
attcctgatgtcaaaaatgactttgcattcctcttacacatggttgatcagtatgaccaa
ctgtactccaagcgcttcggtgtcttcttgtctgaggtcagtgaaaacaagcttagagag
atcagccttaatcacgagtggacctttgagaaactccggcagctcgtgacccgtaacgca
gtggaccagcaggagctgcaccttttcatgctctcaggtcttccgaacgcagtgttcgac
ctcacagacttggaagttctgaagctggagctgatccctgaggtgaggttttcagcaaag
gtctcccaaatgaccaacctgctggagctgcacctctgccactctccggccaaagtagag
cagacagggtttgctttcctccgggaccatctccgctgcctccatgtcaagttcaccgat
gttgctgagatcccggcatgggtatatttgctgaggagtttaagggaacttaacctaatt
ggcaatttgagctcagaaaataacaaaatgatcggcctggagtccatgcgggatttgagg
cacttaaagactctttgcctgaagagcaacctcacaaaaatgccaacaaacatcacagag
ctgtcgccacatctgattaagcttgtggtgcacaatgacggtacaaaattggtggtacta
aatagtctgaaaaaaatgaccaatctgattgaactggagctgcacacctgcgagttagag
aggattcctcatgctatttttagcttggtcaacttgcaggaacttgacctgaaatcgaac
aacatccgaaccatagaggagatcatcagcttccagcatctcaagaggctgacgtgtctt
aaactgtggcacaacaaaattatcaccatcccatcatccattggccaggtcaagtcactg
gagtctctttacctctcccacaacaaactggagtgcctgcctccatccttgttcactcta
cctaaactgaggtacttggacgttggccacaactccatctccgtgctcccgccagacgtg
ggtctcctccacaatctgcagcacttggccatcaactccaacaagctggaggtgctgccc
aagtctctgttcagatgtaccaagctcaaggcgttgtgtctggggaacaatgcgctcacc
gtgctgccagaggtcgcgggtcaactagtgcagctcacccagctggagctgagaggaaac
tgtctggacagactgcccgtccagctgggaaactgccgcctgttgcgcaaaagcggcctg
gtggtggaggaccatctgtttgacgcgctgcctgtggaagtcaaggagaacttcagccga
gagaccagcgcgtccttcggggatggcttatag
DBGET
integrated database retrieval system
