Pungitius pungitius (ninespine stickleback): 119209755
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Entry
119209755 CDS
T07626
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119209755 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119209755 (gtf2b)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
119209755 (gtf2b)
Prokaryotic type
Archaeal type
TFB
119209755 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
Sigma70_r4
RB_B
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
119209755
NCBI-ProteinID:
XP_037315189
LinkDB
All DBs
Position
15:complement(8622576..8627723)
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AA seq
318 aa
AA seq
DB search
MASTSRGDVLSLPRVQCPNHPDTILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE
KALKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAF
KEISTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
EICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARK
AVELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAAE
LFPPDFKFDTPVDKLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacaagccgcggagatgtcctgtcccttccaagagttcaatgtcccaaccac
cctgataccatactggtggaggactacagagcaggggacatgatctgccctgaatgtggc
cttgtagtgggtgaccgtgttatcgacgtaggctctgagtggaggacgttctctaatgag
aaagcactcaaggatccctccagagtgggagacgcccagaacccactgctcaatgggggc
gacctaaccaccatgatcagcaagggaactggcgcagctagttttgatgaattcggtaac
tccaagtatcagaaccggcggaccatgagcagctctgaccgggccatgcttaacgccttt
aaagaaatcagcaccatggcagatcgcatcaacctcccaaggaacatcatcgacagaaca
aacaacttattcaagcaggtttatgaacaaaagagcctgaagggccgagccaatgacgcc
atagcctcggcctgtctctacatcgcctgcagacaagaaggtgtaccaagaacatttaaa
gaaatctgtgccgtctctcggatctccaagaaggagatcggcaggtgcttcaagctgatc
ttgaaagcgctggagaccagcgtggacctcatcaccaccggagacttcatgtctcggttc
tgctcaaacctgggcttgcccaaacaggtgcagatggcggccaccttcattgccaggaag
gctgtggagctcgacctggttcccggcaggagccccatctcagtggctgcagcggccatc
tacatggcttcccaggcctcggcagagaagaagacccaaaaggaaatcggggatattgca
ggtgttgcagatgttacgatcagacagtcctaccgtctcatctacccacgcgccgcagaa
ctctttcccccagacttcaaattcgacacacctgtcgacaagctgccccaactgtga
DBGET
integrated database retrieval system
