Pungitius pungitius (ninespine stickleback): 119209896
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Entry
119209896 CDS
T07626
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin) isoform X1
KO
K24495
myomesin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119209896 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119209896 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
119209896 (myom1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
119209896
NCBI-ProteinID:
XP_037315411
LinkDB
All DBs
Position
15:4599275..4617118
Genome browser
AA seq
1505 aa
AA seq
DB search
MSASVQVTQKLQQQQQQQQCESSCYLSSTSAVKQQSFSSYKTSSRRQKTTVKTEKRQEVV
KLSPLPKRAKRTYLATDTDKEVIGYVIPVFRANHEVVRGLMEAQEEEEVTEEGIHYVAMR
NLFVREAREAVDVKVEKKTRSTHIRESAGRMELSKTMEEWAEFRKKMNPDSLTHPPEFIV
KPRGQTVWEGRTVRLHCTAAGWPKPRVAWYKNNVLIDAKARPQKYTIESSYNMHSLEIKN
CDFMDTAQYHASALNVKGEASAVATVVVKRFQEGEEAGPLDPKPHGFCAEHGVTFETTII
DKFEVAFGHEGETLSLGCTVIIYPTVKKYQPEVVWSRNSVPLKPSQWVHTHWSGERATLT
LVHLNKEDEGMYTLRVNTKSGFDTYSAYVYVRDADVEVEGVPVAPLDVRCHDANKDYVVV
TWKQPAVEGSSSILGYFVDRCEVGTHHWAQCNEAPVKYARFPVTGLVEGRSYVFRVRATN
KEGVSRPSRVSDAVVAMDPSDRARLRAGPSAPWTGMIKFTEEDPTVGVVPGEPSDVVVTE
ATKSYVVLAWKPPVQRGHEGVMYYIEKCISGTDAWQRVNSGMPVKSPRFALFDLAEGRSY
SFRVRCCNSSGVGEASASTGEITVGDKLDLPSSPGNPVATRNTDTSVVVFWGASKDVKYL
VGYYVEYSEVGTDVWTPCNNKPVKQTRFVCHGLTTGSNCVFRVKAVNAAGYSQSSSASEA
VVVKAAISVPGRATGVTLLEAAKDYMMLAWTEPANKGGADIRGYFVDYRTVKGDVVGKWH
EMNLKALTTTSYKAENLKENVFYQFQVRAMNMAGVSEASLPTSALECKEWTITVAGPPVG
LHVLEVRDASAVVLWERPAFDGRTPVSGYYLDIKEAPAGEQGWKAAHEKANKTKYMKVTG
LKSGASYDFRVRAQNLAGVGGPSAVLGPILARTRPGTNEIHVDVDDDGVISMIFECSEMK
EGSEFVWSKNYQTITDTSRLTLVTEQGRSRAIFNSPSLEDLGTFSCVVTNTDGFSSSYTL
TEEGLKRLLDISHDHKFPVIPFKNEMAFELLEKGRVRFWTEVEKCTSACQVDYVFNDVII
NEDKKYTVNFNKSTGIIEMFMDSLEISDEGTFTFDLVDGKAKGTTSLVLIGDEFRELQKK
SEFERAEWVRKQGPHFVEYLGFTVTPECNVLLKCKIGNVRQETQITWSKDSIEIAEDDED
AQKIERNDGDLTFNIGKWVIKQEKPKGKEGKRPPAEDVPPPPRPKISKADAGTYQVLLRD
DRGKDKSVFDLTDAGYQAVMNELFRVIANSSCGIKVTSTEHGIILYSMITYYNEELRVGW
LHKDAKIAASERVKSGVTGEQLWLKINEPTEKDKGKYTMDIFDGKDGVKRVFDLTGKAWE
EAFEEFQRLKAAAIAERNRARVVGGLPDVVAIQEGKSLNLTGNVWGEPAPEVRWTKNDKE
LATDERYQLKFEHGKFASITIAAVTTADSGKYALLVKNKYGTEAGEFTVSVYNPEDEENK
EGKKG
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcatcagtacaagtgacgcagaagctgcagcagcagcagcagcagcagcagtgt
gagagcagctgttacctgagctccacgtcggccgttaaacagcaatcgttctcctcgtac
aagaccagcagccgtcgccagaagaccactgtgaagacggagaagcggcaggaggtggtt
aaactgagcccgctacccaagagagccaagcgcacctacctggccacggacacggacaag
gaagtcatcggctacgtcattcccgtcttcagagccaatcacgaggttgttcgcggcctg
atggaggcgcaggaggaggaggaggtcacggaggagggcattcactacgtggccatgagg
aacctgtttgtcagggaggccagggaggccgtggacgtcaaagtggagaagaaaaccaga
tcaacgcacatcagggagtccgccgggcgcatggaactcagcaagacgatggaggagtgg
gcggagttccgtaagaagatgaacccggacagcctgacgcaccctccggagttcatcgtc
aagccccgcgggcaaaccgtgtgggagggcaggacggtcaggctgcactgcaccgcggcc
gggtggcctaagcccagggtcgcctggtacaaaaacaacgtcctcatcgacgccaaggcc
cgcccgcagaagtacacgatcgagagcagttacaacatgcactccctggagatcaagaac
tgtgatttcatggacacggctcagtatcacgcctccgccctcaacgtgaaaggagaagct
tctgccgtggccaccgtcgttgtcaaaaggttccaggagggcgaggaagcgggcccgctc
gatcccaaaccacatggtttctgcgctgagcatggtgtcacattcgaaacaaccatcatt
gacaaattcgaagtggcctttggccacgaaggcgaaactttgagcctgggctgcaccgtc
atcatttaccccactgtgaaaaagtaccagcctgaggtcgtgtggtccagaaactctgtc
cccttgaagccctctcagtgggtgcacacccactggtccggagaacgagccaccctcaca
cttgtccacctcaacaaggaggacgagggcatgtacaccctgcgtgtcaacaccaaatct
ggctttgacacctactccgcttatgtgtatgtcagagacgccgatgtggaggtagagggg
gttcccgtggcccccctggacgtgcgctgccacgacgccaacaaggactatgtggtggtg
acctggaagcagccggcggtggagggcagcagctccatcctgggatacttcgtcgacagg
tgcgaggtgggcactcaccactgggcccagtgcaacgaggcgccggtgaagtacgcccgc
ttccccgtcactggactggtggagggacgctcctacgtcttcagggtgcgggccaccaac
aaggaaggggtcagcaggccgtcccgcgtctccgacgccgtggttgccatggatccctcc
gacagggcccgcctcagagccggcccgtcagccccttggaccgggatgattaagttcacc
gaggaggatcccactgtgggagttgtccccggagaaccctctgacgtggtggtcactgag
gccaccaagagctacgtggtgctcgcctggaagcctcccgtccagaggggccacgaagga
gtcatgtattacatcgagaagtgcatctcggggacggacgcctggcagagggtgaactcc
ggcatgccggtcaagtctccgcgcttcgccctgttcgacctggccgagggccggtcctac
agcttccgcgtgcgctgctgcaactcctccggtgtgggcgaggcctccgcgtccacgggg
gagatcacggtgggagacaaactggaccttccgtcgtctcccggcaatccagtggccacc
aggaacactgacacctcagtggtggtcttctggggggcctctaaggatgttaaatacctg
gttggatactacgttgaatacagcgaggtgggcaccgatgtgtggacaccttgtaacaac
aaacccgtcaagcagaccaggtttgtgtgccacggcctgacgacggggtcaaactgcgtg
tttcgggtcaaagccgtcaacgccgccggatacagccagagctcctccgcttctgaggcc
gtggttgtgaaagccgccatctccgtccctgggagggccactggggtgaccttgctggag
gctgcgaaggactacatgatgctggcctggactgaacccgctaacaaaggaggagcagat
atccgagggtactttgtggactacaggacggtgaagggcgacgtggttggaaagtggcat
gaaatgaacctcaaggcattgactactacctcttataaagctgagaacctgaaggagaac
gtcttctaccagttccaggtgcgcgctatgaacatggcaggtgtgagtgaagcctctttg
cccacctcagctctggagtgcaaggagtggaccatcactgtggcaggtcctcccgtcggt
ctccacgtgctggaggtccgggacgcctccgccgtggtcctgtgggagcgacccgccttc
gacggccgcacgcccgtcagcggctactacctggacatcaaggaggcccccgccggagag
cagggctggaaggctgctcacgagaaggccaacaagactaaatacatgaaggtgacgggg
ctgaagtcgggtgcgtcctacgacttccgcgtgcgcgctcaaaacctcgccggagtcgga
gggccctccgcagtcttgggtccgatcctggcccggacccgccccggcaccaatgagatt
cacgtggacgtcgacgacgacggcgtcatctccatgatctttgagtgctccgagatgaag
gagggctctgagtttgtttggtccaagaactaccagaccataacagacacgtcccgcctg
actctcgtcactgaacagggaaggtccagggccatcttcaacagtccctcactggaggat
ctgggcaccttctcctgtgtggtcaccaacaccgacggcttctcctccagctacacactc
accgaggagggtctcaaacgtcttctggacatcagccatgaccacaagttccccgttatt
cccttcaagaatgaaatggcctttgagctgctggagaagggtcgcgtacgtttctggact
gaagtggagaaatgcacttcggcctgccaagtggattatgtctttaacgacgtcatcatt
aacgaggacaagaaatacacggtgaacttcaacaagtccaccggcatcattgaaatgttc
atggactccctggagatcagcgacgagggaacgttcaccttcgacctggtggacggcaag
gctaagggcacaaccagcctggtgctcattggagacgagttcagggagctacaaaagaag
tctgaatttgagagggcagaatgggtcaggaaacaaggtcctcactttgtcgagtacctc
ggcttcactgtcactccggaatgtaacgtgctgttgaaatgcaagatcggaaatgtcaga
caagagactcagatcacctggtctaaggacagcattgagatcgcagaggatgatgaggac
gctcagaaaatcgagagaaacgacggcgacctgacctttaatatcggaaagtgggtaatt
aagcaggagaaaccaaaaggaaaagaaggaaaaaggccacctgcagaggacgttcccccg
ccaccaagacccaaaatctccaaggcggatgcgggtacttaccaggtcctgctgagggac
gaccgaggcaaagacaagagcgtcttcgatttgacggacgcaggataccaagctgtgatg
aatgagctgttcagggttatcgccaactcctcctgtggtataaaagtcaccagcactgaa
catggcatcatcctctactccatgatcacatattacaatgaggaactgcgtgtcggttgg
ctccacaaagatgctaagattgcagcctcggagagagtaaagtctggagtcacaggagag
cagctttggctgaagatcaatgagcccactgagaaggacaaaggcaaatacaccatggac
atcttcgacggcaaggacggcgtgaagagggtctttgatctgaccggcaaggcttgggaa
gaggcatttgaagaattccaaaggctcaaggcggcagcaatcgcagagagaaatcgcgcc
cgggttgttggaggcctgccagatgtggttgcgatccaagagggcaaatccctgaacctg
accggcaacgtctggggcgagccggcgcctgaggtccgctggaccaagaacgacaaggag
ctggcgactgacgagcgctaccagctcaagttcgagcacggcaagttcgccagcatcacc
atcgccgccgtcaccacggccgactccggcaaatacgccctcctggtcaagaacaagtac
ggcacggaggccggcgagttcaccgtcagcgtctacaacccggaggacgaggagaacaag
gaggggaagaaaggctaa
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integrated database retrieval system
