Pungitius pungitius (ninespine stickleback): 119210033
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Entry
119210033 CDS
T07626
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119210033 (caprin2)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
119210033 (caprin2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
119210033
NCBI-ProteinID:
XP_037315522
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Position
2:complement(12861720..12873843)
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AA seq
847 aa
AA seq
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MAPWPSRLNAPAAKGSIPFRTLELPQRIQRARGKDRVEIDMVQISTPTRSVTPQSECSES
QENLVMAERPELCSPGALSALQRSLETSTVYYGYDTYIEDGLLCLKHKIRNLEKKKLKLE
DYRKRLDFGEELNHDQTEAVKKYEEVVHNLVFARELHMSLNALTQNLLVAQKKAVRKEQV
LKEQTERRHLSTVLQIQHLLHCMQQEHVRRDLLSGSNQAPHIAAQQLRSLSLLAALLGVK
RNNGLSLEEQMEQAATAYLDLLEGKDKPVAGSTFKLFKEELTRLSNCKYFSCLPHPPMKS
PEVVLKSHDNSTPSKSKLKGSKESWNEDFQTTIEREPPDSWDIEVADAPGSAHAAVYKPW
RGAATFIPKVPVAAKEQSIDSKQTKKTGAKSKRRAKSQAVHKGMPVEVFSYPYALPKDPV
LRKQHLEDLMTTIHGSFSFMQDSLLDGDIPAANDYPRVKRQQSRSPLPLGHTVLRSPVNV
LPKAMHSTPLPIKLLERKASLTNEDPFLEVCDPSSTDLPHIAVAESNKKSPRNGMISCTS
TPSKRQSFSTPPARRTVTSSHIQPAIRCTASTQTPPEFLTSEEEPLFVYQSDYAVGNGGP
IFLSPGQSDGSGGRPSQLYYSRGSVRGSCTSQTDPCYAARDSGCQQGFSREGGRHNLSAW
SDSSQMSPPNREGAFTIVDSGHGDSLSVSTIEVPLTPHGHQHTLLPIQLHPLSQPLRVAF
NASRTVNFAPGNLDQPIVFDQLHTNLGEMYDTHIGRFTCPVDGTYVFIFHILKLAINVPL
YINLMRNEEVMVSAYANDGAPDHETASNHAILPLFQGDQVWLRLHRGAIYGSTWKYSTFS
GFLLYQD
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtggccttcgcgtttaaacgccccggctgcaaagggctcgatccctttcagg
actttggaattaccacaaaggatccaacgtgcacgaggcaaggatcgtgtggagatagac
atggtgcagatttcaacccctactcgaagtgtcaccccccaatctgagtgctcagaaagt
caggagaacctggtcatggctgaaaggcctgagctgtgctcaccaggtgctctgagtgcc
ctgcagcgcagcctggagacctccactgtctactatggctatgatacctacatagaagat
gggctcctctgccttaagcacaaaatccgaaatttagaaaaaaagaagctgaaactcgaa
gactacagaaagaggctggactttggtgaggaacttaaccatgatcagacggaggctgta
aaaaagtatgaagaggtcgtgcataatctggtgttcgcaagggagctccacatgagcctg
aatgctttgactcagaatttgctcgtagcccagaagaaggccgtgaggaaggagcaggtg
ttgaaggaacagactgagaggaggcatctgagcactgtgctgcagatccagcaccttctc
cactgcatgcagcaggagcatgtcagaagagacctactgagtggaagcaaccaggcgcca
cacattgcagcccaacagctgcggagtctgagtctgcttgctgctctgctgggggtcaag
aggaataatggactgagtttagaggagcagatggagcaagcggccacggcctatttggac
ctgctagaggggaaagacaagccagtggctggatccacatttaagcttttcaaagaagag
ctcaccaggctgtcaaactgcaagtacttcagttgtcttccccatccacccatgaagtca
ccagaggtggtactgaagtcacacgacaatagcacaccatcaaagtcaaaacttaaaggt
tctaaggagagctggaatgaggacttccagacaacaattgagcgggagcctccagacagc
tgggatattgaggttgcagatgcacctggctcagcccacgccgcagtctacaaaccgtgg
cgaggagctgctacttttatccccaaggtcccagttgctgctaaggaacaatctattgac
tccaaacagacaaagaaaactggagccaaaagcaagcgacgtgccaaatctcaggcagtt
cacaagggtatgcctgtagaggttttcagctatccatatgccttacccaaagaccctgtc
ctgaggaaacagcatctagaggacctaatgacaacgatccatggctctttcagtttcatg
caggactctcttctggatggggatattcctgccgctaacgactatccaagagtgaagaga
cagcagtcaagatctccgctgcctctgggtcacacggtcttgagaagcccagtcaatgtt
ctgccaaaagcaatgcactccaccccgctgcccatcaagcttctggagcgcaaagccagt
ctaacaaatgaggatcccttcctggaggtctgtgacccttcctcaacggacctgcctcat
attgcagtggcagagtcaaataaaaagtccccccgtaatgggatgatttcttgcacctcc
accccctcaaagagacaaagtttctctacacctcccgctaggcgaactgtgacatcttcc
cacattcagccagccattcgctgcactgccagtacacaaaccccccctgagtttcttacc
tcagaggaagaaccactatttgtctaccaatccgattatgcggtgggaaacggtggaccc
atcttcctgtccccgggccaatcggatggaagcggaggtcgtcccagccagttgtactat
agcagaggatcagtgagaggatcctgtacctcccagactgatccatgctatgctgccagg
gactctggatgtcaacaaggctttagccgcgaaggagggaggcataatttgagtgcatgg
agtgactcttcccagatgagcccaccgaaccgagagggagcttttaccatcgtggactct
ggtcatggagactccctctcggtctccacaatcgaggtccctctgacgccccatggtcac
cagcacacccttcttccgatacaactccacccactctctcagccacttcgagtggccttc
aatgcctctcgcactgtcaatttcgcacccggaaacctggaccagcccatcgtgtttgac
cagctgcacaccaacctaggggagatgtatgacacccacattggccgtttcacctgtcct
gtcgacggaacctatgtgttcatttttcacatcctgaaactcgccatcaatgtgcccctc
tacattaacctcatgcgcaacgaagaggtgatggtgtctgcatatgccaacgatggagcc
ccggatcatgagactgccagcaaccatgccatcctgcctctctttcaaggtgaccaggtg
tggctccgattgcatcgcggtgccatctatggcagcacctggaagtacagcactttctct
ggcttcctgctgtaccaggattga
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