Pungitius pungitius (ninespine stickleback): 119210069
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Entry
119210069 CDS
T07626
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119210069 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119210069 (atrx)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119210069 (atrx)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
119210069 (atrx)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
119210069 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119210069
NCBI-ProteinID:
XP_037315579
LinkDB
All DBs
Position
2:complement(33190994..33215398)
Genome browser
AA seq
2133 aa
AA seq
DB search
MSLASSESHQDQMSEKAEEPGSSAETMKPSSSRNRRKLTNVCKHTGLKDSDASAESENEV
ATSDNVSDNNTSNTSKGTLVMRPAGNDNKGAMKLRVDFKQKHTDDTLQEKVNCTACGKQV
YQFQRNSVYKHPALQVLICKSCYKYYTSDDINRDSDGMDEQCRWCAEGGKLICCDYCNNA
FCKKCILRNLGRKELSVITDENSKWHCYVCRSEPLQDLVSKCHSIMEKHELKERKPDKSE
ERESKRHKNKEVKEHKAILNGKEHTEGSGSITFSYKKLQVPKELLKKAKNLVETTTGLNN
TFIQFIQQTADKQEDKSIRYRHLKAFRAVLADLKKAHSALEAALVPEFKNMELQNGNEQL
VVRKNPYLVYRVENDHVDNIADEEEEADDQASEEADDQASDEADHPAAKKTDDQATKQAV
DLAAEEEADDLPAEEAVGEQADVAPQEVPDIAVEEADHAEAEDEEADHAEAEDEEADHAE
AEDEEADHAEAEDEEADHAEAEDEEADHAEAEEANHAAAEADRLQHNEHKGSDKTKTKEN
QTQAVVTKKTIKTEVCDDGLVSAGEMSLDQDIMSVPPSVPEELFQMVESLADSTMLSQSD
ANLVKDAVKKLNGNSKDSQSPQPKVKNLIVKLTPVPVVTTRGSRSSSRNREKAGETQRRC
DDQEKDKGNAAKAADGTGSPPPSRRSSRLKTTPLRKQAENKGKEESSESEEDCKGKTKCS
KKSRNNNKEKTKNSEKNPMDSDSDEIPHILLEKAAAGQTTDEEQEGTSAKKCLFKLKNIS
TQDTDKATKRKRKSESSDSDLGIKSKKKNKQNGSDLTDSDQEKETKSKAATSKRRSSRVK
KQDEAKEGGKGSPERNAAKRRRSYESKRKGRGLREAASKQQLSSSEDEEEEEAEGDSGED
SDEQKIKPIVEDNVVGGSGAFRQSSGDEEDDKDGVPQDCEDDDDDPENRIAKKMLLAQIK
SNYSSGAESSSDNEDAEKDEKSSKKFKDENDDDDEEEQQDDEDSEDSSAEVKKRVGRHKL
LRHKLSLSEGESGEEKASSKEKKGGKKKSGQKVRSDDSSESESDFEKSEASEESGISEEL
SESENEGKRRKTRSSKKKDDAKQKSNKQQQQQQQKKKKRRRIKVQDSSSSNEKSGKEDGD
EDDEDHKGRKKIRKILKDDKLRTETRDALKEEEDRRKRIAEREALREKLREVIVLKESSH
VTCPCPITTKLVLDEDEETKEPLVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKIEKSS
GSGCILAHCMGLGKTLQVVTLLHTLLLCEKLEFTTALVVCPLNTVLNWLNEFEKWQVGLK
DDESLEVIELATVKKAQDRAYALQRWQESGGVMIIGYEMYRNLTQGRNTKSKKLKETFQK
TLVDPGPDLVICDEGHILKNEASAVSKAMNSIRTRRRIVLTGTPLQNNLVEYHCMVNFIK
ENLLGSVKEFRNRFINPIQNGQCADSTLQDVRIMKKRAHILYEMLAGCVQRKDYTALTKF
LPPKHEYVLSIRVTPIQCKLYRYYLEHFTGVGNSVEGGRGRAGTKLFQDFQVLSRIWTHP
WCLQLDYISKENRGFFDEDSMDEFIASETEESSMSMTSEDEKAKKKKKQGKGKKRGSDDS
DSDDVEVIKEWNTSSRGKNGEGRNRPEVVEEPRIANSADGSPTHDWHKEFVADADAEILE
HSGKMVLLFEILRMAEEMDEKVLVFSQSLISLDLIEDFLELSCRAKDDEKVSPYKGEGKW
FRNIDYYRLDGSTNATTRKKWAEEFNDTSNPRGRLFLISTRAGSLGINLVAANRVIIFDA
SWNPSYDVQSIFRVYRFGQIRTVYVYRFLAQGTMEEKIYDRQVTKQSLSFRVVDQQQIER
HFTGVELAELYTFEPEMLDDPSGKKSKKATPMLPKDPFLAELLQNNKDQIVCYHEHESLL
DHKEEEALSEEDRKAAWAEYEAEKKGVFVRNNYQPGYPQMDMGNSNYFNFNMAALASMSN
QQLEDLINQGRQKVIEATTSLKTLARESLEDTIARLWKENPALTESQVQSMALGHQASVE
LEIKRREAVYRDVLTRQQTLMMYVQKLITNRKVQEQQLAMANQANYLNQLAIQNGMMGSG
GISQMDLVGLYQQLHGLGSHQGMGKNPGPSKGL
NT seq
6402 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcttcttctgaatcgcaccaagatcaaatgtcagaaaaggcagaggagcct
ggaagctcagcagaaactatgaagccttcctcttctcgcaacagaaggaagctcactaat
gtatgtaagcacactggactgaaggactctgatgcctcagctgaaagtgaaaatgaagtt
gccacttctgacaatgtttcggacaataatacaagcaacacatctaaaggcactttagtg
atgaggccagctggaaatgataataaaggtgccatgaagctccgagtagattttaaacag
aaacatacagatgataccctgcaggagaaggtgaactgcactgcgtgtggtaaacaggtt
taccagttccagcgcaactctgtgtacaagcatcctgcactccaagtactcatttgcaag
tcatgctacaagtattacacaagtgatgacatcaacagagactctgatgggatggatgag
cagtgcaggtggtgtgctgaaggtggcaagctcatctgctgtgactactgcaacaatgcc
ttctgcaagaagtgcatcctgcgcaatctgggcaggaaggagctctctgtcattaccgat
gagaactcaaagtggcactgttatgtctgcaggtcagagccccttcaggatcttgtctcc
aaatgccacagcatcatggaaaaacacgaactcaaggaacgaaaaccagacaaaagcgag
gaacgtgaaagcaagcgacacaagaacaaagaagtcaaagagcacaaagcaattctcaat
gggaaagaacacactgaaggctcagggagcattacattctcctacaaaaaactacaggtg
cccaaagaacttctaaagaaagcaaaaaaccttgttgaaaccacaactggtctgaacaat
acattcatccagttcatccaacagacagctgacaagcaggaagataagtccatcaggtat
cggcatttgaaagccttcagggcagtgctcgctgacttgaaaaaagcccacagtgcttta
gaggcggctttggtgccagagttcaaaaacatggagttgcagaatggtaacgaacaactc
gttgtgagaaagaacccatatcttgtgtatcgagtagaaaatgaccacgtggataatata
gctgatgaagaagaggaggcggacgaccaggcatcggaggaggcggacgaccaagcatcg
gatgaagctgaccacccagctgccaagaagactgacgaccaggcaacaaagcaggctgtg
gacctagctgcggaggaggaggccgacgacctccctgcggaggaagcggtaggggagcag
gccgatgtagcgccacaagaggtccctgacatagcagtggaggaggctgaccacgctgag
gcggaggatgaggaggctgaccacgctgaggcggaggatgaggaggctgaccacgctgag
gcggaggatgaggaggctgaccacgctgaggcggaggatgaggaggctgaccacgctgag
gcggaggatgaggaggctgaccacgctgaggcggaggaagctaaccatgcagcagcggag
gccgacaggctgcagcataatgagcataaagggtcggataagactaaaacaaaagagaac
caaacacaagctgttgttaccaaaaagacaattaaaaccgaagtgtgtgatgacggtcta
gtgtcagctggtgaaatgtctctagatcaagacattatgtctgtgcccccttcggttccc
gaggagctttttcaaatggtggagagccttgcggattccaccatgctctcacagtctgac
gccaatttggtcaaagatgctgttaaaaagttaaatggaaattcaaaagactctcaatct
cctcagcccaaggtgaagaacctcattgtcaaactgactcctgtgccggttgtgacgaca
cgtggttccaggtcctcctccagaaaccgggagaaagccggggagacgcagagaaggtgt
gacgatcaggagaaggacaaaggcaatgctgctaaagcagcggatgggacaggcagcccg
ccacccagccgccgctccagtagattaaagactactcccttgaggaagcaagctgagaat
aagggcaaggaagaatcctcagagtcagaagaagattgtaagggcaagaccaaatgctca
aagaaatccagaaacaacaacaaagagaagaccaagaattcagagaagaacccaatggat
tctgactctgacgaaatccctcacatactgctggagaaagcggcagctggccaaaccacg
gatgaggaacaggaaggcacaagtgctaaaaagtgtttattcaaactgaaaaacatatcc
acacaggatacagacaaagctaccaaacgcaaaaggaagtctgaaagctctgattcagac
ttggggatcaaaagtaaaaagaagaataaacagaatggctcagacttgactgactccgac
caggagaaggagactaagagtaaagcggccacatcaaagcggagatccagccgtgtaaag
aagcaagatgaagccaaagaaggaggaaaaggctcccctgagaggaatgcggccaagcgg
agacggtcttatgaaagtaagcgaaagggaaggggcctcagagaagcagcttccaagcag
cagttgtcctccagtgaggacgaggaggaggaggaggctgaaggtgactccggagaggac
agcgacgagcaaaagatcaagcccattgtggaggataacgtggtcggaggaagtggggct
ttccgtcagtcgtcaggagatgaagaggatgataaagatggagtccctcaggattgtgaa
gatgatgatgatgatcctgaaaacaggattgctaagaaaatgcttctcgcccaaataaaa
tccaactattcatctggagcagagagttcctccgataatgaagatgcagagaaggatgaa
aagtcctccaagaaatttaaagacgagaacgatgacgacgatgaagaagagcaacaagat
gatgaggattcagaagattccagtgccgaggtgaagaagcgtgtaggacgccacaaattg
cttcgtcataaactctccctgagcgagggtgaatcaggagaggagaaggcctccagtaaa
gagaagaaggggggaaagaagaagtctggacagaaagtccgcagcgacgactcttcagaa
tccgaatcagattttgagaagtcggaagccagcgaagagtctgggataagcgaggagctc
agtgagtcggagaatgaaggcaagcgacgaaagaccagatcttcaaagaaaaaggacgac
gcaaaacagaaaagtaacaaacagcagcagcagcagcagcagaagaagaagaaacgacgc
aggatcaaggtccaggattcctcttccagcaacgagaagagtggaaaggaagacggtgat
gaggacgacgaggaccacaaaggacgcaaaaagatccgcaaaatcctgaaggacgataag
ctgcggacagagacgagggacgcgctgaaagaagaggaggacaggaggaaacgtatagct
gagagggaagcactcagggagaaacttcgagaggtgattgtgctgaaggagtcttcccac
gtaacctgtccctgtcccatcaccaccaaactggtcctggatgaggatgaagagaccaag
gagccgctagtgcaggtgcacaggaaccttgtcacaaaactgaaacctcaccaggttgac
ggggtgcagttcatgtgggactgttgctgtgaatctgtaaagaagattgagaagtcttct
ggctctggctgcatactcgcccattgcatgggtctggggaaaactctgcaggtggtgacg
ttactccacacgttgctgctttgtgagaagctggagttcaccacagcgctggtggtttgt
cccctgaacactgtgctcaattggctcaacgagtttgagaagtggcaagtcggtctgaag
gatgatgagagtttagaggtgatcgagctggccacagtaaagaaggcacaggaccgggcc
tatgccctccagcgatggcaagaaagtggtggcgtaatgatcatcggctatgagatgtac
aggaacttgacacagggaaggaacactaagagcaagaagctaaaagagacatttcagaag
acacttgtcgatccaggtccagacttggtaatctgcgatgaaggtcacatattgaagaac
gaggcgtctgctgtgtccaaggcgatgaattccatcaggacgaggaggaggattgtgctc
actggaacgccgctccaaaataaccttgttgaataccactgcatggtgaacttcatcaag
gagaaccttctggggtccgttaaggagttcaggaaccgcttcataaaccccattcagaat
ggtcagtgtgccgactccacactacaagatgtccggatcatgaagaagagggctcacatc
ctctatgagatgctggccggttgtgtccagaggaaagattacacagcgctcacaaagttc
ctccccccgaaacacgagtatgtgttgtcgatcagagtgactccaattcagtgcaaactc
tacagatactatctggagcacttcacaggtgtagggaattcggtagaggggggccggggc
cgcgcagggaccaaacttttccaggatttccaggtgctcagcagaatttggacccatccc
tggtgccttcagctggactacatcagtaaagaaaaccggggtttctttgacgaggacagt
atggatgagttcatcgcttcagaaaccgaagagtcgtcaatgagtatgacatccgaggac
gagaaggccaaaaagaaaaagaagcaagggaagggaaaaaagagaggatctgatgactcg
gacagtgatgacgtggaggtcatcaaggagtggaacaccagctcacggggcaaaaacggg
gagggtcggaacagaccagaggttgtagaagagccccggattgctaactctgccgatggg
agccccactcacgactggcacaaagagtttgttgcggacgctgatgctgagattctggag
cactctggaaagatggtgctcctgtttgagatcctgcgcatggctgaggaaatggacgaa
aaagtcttggtgttcagccagtctctgatctctctggacctgattgaggatttcctggag
ctgtcttgcagagctaaagatgatgagaaggtttctccgtacaaaggtgaaggcaagtgg
ttcaggaacattgactactatcgtctggatggctccaccaacgccaccaccaggaagaag
tgggctgaagagtttaatgacaccagtaacccaagaggtcgtctgttcctaatttcaacg
cgagccggctctcttggtatcaacctggtggccgccaacagggtcataatctttgacgcc
tcctggaacccctcctacgacgtccagagtatcttcagggtctaccgctttggccagatc
aggaccgtctatgtgtacaggttcttggcgcagggcacgatggaggagaagatctatgat
cgccaggtgaccaaacagtctctgtctttccgggtggtggaccagcagcagattgagagg
cacttcacgggcgtggagctggcagagctctacacctttgagccagagatgttggatgac
ccctctgggaagaagagcaagaaagccacacccatgctccctaaggaccccttcctggcc
gagctgctgcagaataataaggaccagatcgtgtgttaccatgaacacgaatccctgctg
gaccacaaggaggaagaagccctgagcgaggaggatcgcaaggcagcctgggccgagtat
gaagctgagaaaaagggcgtgtttgtgaggaacaactaccagcccggatacccccagatg
gacatgggcaactcaaactacttcaacttcaacatggcggcgttggcctccatgagcaac
cagcagctggaggaccttataaaccagggacgacagaaagtcatcgaagcgacaacttct
ctgaagactctagcacgcgagtcactggaagataccatcgcccgactgtggaaggagaac
ccagcactcacagagagccaggtccagtccatggcgctgggccaccaggccagcgtggag
ctggagatcaagcgcagggaggccgtgtacagagacgtgctcacccggcagcagacgctg
atgatgtacgtccagaagctgatcacaaacaggaaggttcaggagcagcagctggccatg
gccaaccaggccaactacctgaaccagctggccatacagaacggcatgatgggaagtggc
ggcatcagtcagatggacctggtggggctttaccagcagctccacggcctgggctcccat
caaggcatgggcaagaaccctgggccctccaagggcctgtag
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integrated database retrieval system
