Pungitius pungitius (ninespine stickleback): 119210191
Help
Entry
119210191 CDS
T07626
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119210191 (rnf20)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119210191 (rnf20)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
119210191 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
CC_Bre1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
HAT1_C
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
SOGA
Motif
Other DBs
NCBI-GeneID:
119210191
NCBI-ProteinID:
XP_037315840
LinkDB
All DBs
Position
2:complement(23789165..23797460)
Genome browser
AA seq
1022 aa
AA seq
DB search
MSGQKRPADPSGPSSSGAPQEKRREREGEDGAPGVSAAAGGSTAVETVIKLGGVSNSEEQ
DIKALQAKNRKLGESLDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQFDENVQL
TIRRYDQASSEPEKSLTGEGRSLKPDTPEPDGDSNPERAKDRNHQGETNNSFLATLASSS
SEEMEAELQERVESSQKQARHVVEIYECLKSTVDQLKAELDSGAEGSLWPTASKLNSLLT
SENKRLQQLTEDLKQKHSHMTSESRPLGRAANKADQRISELQVLIEELQWDMEKIRRREN
RLNAHLIEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSDMEENTELADNRFVELQ
KLQQDLQSVHQENNNMKTELVNRAAGLVKETSEYRCLQSQFSVLYNESLILKAQLDETRA
RLNTTRTARLRQLEHMENDEVALQRKVRTEVFQLEDTLAQVRKEYEMLRIEFEQTLAANE
QAGPINREMRHLISTLQNHNQQMKGEVVKYKIRLRETQTELNQVRTSKGNAILQSQSSSE
MDVKEETTSPSTPAISGDPVVKTEPDNGSSTPSSTGASVKTDHGVEPDAAVKEEEKEEKK
EKDEKKEKEIIKKEEKEREKEKERERPSRSSGSSSVIKDEKEKQGSSSQPEESTGERLSV
VGGLKRKEMEQLKIVKAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKSKSEG
EELRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEEDALLSEMDV
TGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQ
VDAQLQVVRKLEEKERLLQGTISTAERELALRTQALDMNKRKAQESASLSEEMRTQLEQV
QQRLNLVREEVIENSISREKESFNARRAQEDISKLRGKIEKAKKPAEKISNGDDILNEEI
NDYKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIY
IG
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggacagaagcgtcctgccgacccaagcggcccttcgtcctccggtgcgccccaa
gagaaacgcagagagcgggaaggagaggacggagcccccggtgtcagcgccgctgctggg
ggtagcaccgcggtggagacggtcatcaaactaggaggggtgtccaactcagaagaacaa
gacatcaaagctctgcaggctaaaaaccgaaagttgggagaatctcttgatcaaagacag
gtgattgaggatgaattgcgagagcggattgagaggctggagacccgccaggccaccgac
gatgccagtctgctgatcctcaacagatactggaaccagtttgatgaaaacgtccaactg
accatcaggcgttatgaccaagcaagcagcgaacctgagaaatccctgacaggtgagggg
cggagcttgaagccggacactccagaacccgatggcgactccaacccggagcgggccaag
gacagaaaccaccagggagagacaaacaactccttcctggcaacgctggcaagcagcagc
agtgaggagatggaggccgagctccaggagagagtggagtccagccaaaagcaggcccgt
cacgtggtggagatctatgaatgtctgaagagcactgtggaccaactgaaggcagagctg
gactctggtgctgagggaagtctatggccgactgcttccaaactaaattctctcctgacc
agcgaaaacaagcgcctgcaacagctgactgaggaccttaagcagaagcacagtcacatg
acgagcgagtcccggcctctgggtcgtgctgccaacaaagcagaccagcgtatcagcgag
ctgcaggttctgatcgaggagctccagtgggacatggagaagatccgccgcagagagaac
cgactgaatgcacacctgattgagatactggagagggtgaacagtaaaggatataaggtg
tgtggggaggccagcagcgtttgtgggaccatcactatcaacaagcgaaagtttgaagag
atgaacagcgatatggaggaaaatacagagctggcagacaaccgctttgttgagctgcag
aagctccagcaggacctgcagagtgtgcaccaggagaacaacaacatgaagacggagctg
gtgaatcgagctgctggcttggtcaaagagacttctgagtaccgctgcctgcagtcacag
ttttctgtcctctacaacgagtctctgattctcaaggctcaattagatgagacacgcgct
cgtctcaacacaaccaggacagcaaggcttcggcagctggagcacatggagaatgatgaa
gtggctctgcagaggaaggttcgtacagaagtctttcagctggaggacacactggctcaa
gtcaggaaggagtatgagatgttgcgcatcgaatttgaacagactcttgctgccaacgag
caagcaggtcctatcaaccgggagatgcgtcacctgatcagcacgttacagaaccacaat
cagcagatgaagggagaagtggtgaaatacaagatcagactgagagagacacaaacagag
cttaaccaggtccgcacttcaaagggcaacgccatactccagtcccagtcgagctcagag
atggacgtgaaggaggagacaacttcgccttcaactccagccatcagcggggaccctgtg
gtcaagacggagcctgacaacggctcctccacgcccagcagcaccggagcctctgtgaaa
acggatcatggagtggaacctgacgcagcagtaaaagaggaggagaaagaggagaagaaa
gagaaggatgaaaagaaagaaaaggaaattatcaagaaagaggagaaggagcgggagaag
gaaaaggagagagagcggcccagtcgcagcagtgggagcagcagtgtgattaaggacgag
aaggagaagcaggggagcagcagccagcctgaggagtcaaccggggagcgtctgtctgtg
gtcggagggttaaagaggaaggagatggagcagctgaagatcgtcaaagctgaactcaag
aaagcgcaggagtcccagagggagatgaagctgctgctggacatgtaccgctcagcacca
aaggagcagagggacaaagtccagctcatggctgctgagaagaagtccaaatcagaggga
gaggagctgcggcagaggctgagggagctggaggagagggagaggagggagggcaagaaa
atggcagacgaagaggccctgaggaagatccgctctgtggaggagcagattgatatcctt
aacaagaagctctctatagcaaaacaggaggaggacgcgctcctgagcgagatggatgtg
accggccaagcttttgaggacatgcaggaacaaaacatccgtctgatgcagcagctcaga
gaaaaagacgacgccaacttcaagctgatgagcgagcggatcaagtccaaccagatccac
aagctgctaaaagaggagaaggaggagctggccgaccaactgcttactttaaaaactcag
gtcgacgctcaactgcaggtggtgaggaagcttgaggagaaggaacgcctgctgcagggc
accatcagcactgccgagagagagctggcacttagaacacaagctttggacatgaataaa
cgcaaggctcaggagtctgcgtcgctgtcggaggagatgcgaactcagctggagcaggtt
cagcagagactcaacttggtccgagaggaagtcatagagaacagcatctccagggagaag
gagtcctttaacgctcgacgagcacaggaggacatctccaagctaaggggaaagattgag
aaggctaagaaaccagctgagaaaatcagcaacggagatgacatcctaaatgaagaaatc
aatgactataaggcccgcctaacgtgtccgtgctgcaactctcgggtgaaggacgccgta
ctaaccaagtgcttccacgtcttctgcttcgagtgcgtcaagacccggtacgacacgcgc
cagaggaagtgccccaagtgcaacgcggccttcggggcgaacgacttccaccgaatatac
atcgggtga
DBGET
integrated database retrieval system
