Pungitius pungitius (ninespine stickleback): 119210214
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Entry
119210214 CDS
T07626
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
ppug03015
mRNA surveillance pathway
ppug03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119210214
09122 Translation
03013 Nucleocytoplasmic transport
119210214
03015 mRNA surveillance pathway
119210214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119210214
03041 Spliceosome [BR:
ppug03041
]
119210214
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
119210214
Spliceosome [BR:
ppug03041
]
Common components
Common spliceosomal components
Cap binding complex
119210214
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
HmpF
Apolipoprotein
AAA_13
DUF1690
AAA_11
Vfa1
WIT1_2_N
FANCI_S4
Fib_alpha
FapA
tRNA_bind_2
Exonuc_VII_L
Phage_Gp23
PHM7_cyt
PIN_8
Motif
Other DBs
NCBI-GeneID:
119210214
NCBI-ProteinID:
XP_037315894
LinkDB
All DBs
Position
2:16737940..16744991
Genome browser
AA seq
797 aa
AA seq
DB search
MSRRRHSDSENEGSQPHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEA
DLPNYKNKILRILCCVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNN
LYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFISVTQEEDVPQVRSDWFVYMVLSCLPW
VGKELYEKKDAEMDRLLSQIEGYLRGRVKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKL
KKDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMPDAQYPMPRVIFRMFDYTDAPE
GPVMPGSHSVERFVIEENLHCIIQTHWKERKTCAAQLLSYPGKNKIPLNYHIVEVIFGEL
FQLPTPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTSCIDRLINWFSH
HLSNFQFRWSWDDWSDCLAVDLEKPKPKFVKEVLEKSMRLSYHQRMVDIVPATFSALIPA
EPIFIYKYEDESASSLPGYPASITVGNAIKNRATNEEILTILKEVPNPNQEDDDDEGESF
NPLKIDVFLQTLLHLAAKSFSHSFSALGKFHEILKALTERDEGKLHILKVVYEVWRNHPQ
MIAVLVDKMIRTQIVDCAAVANWLFSQDMAHEFTRLFVWEILHSTIRKMNKHVQKIQQEL
EEAKDKLEKQQHKRQKDSGDEEDMDKNSEDEEGQLEEQIERLQEKVESAQSEQKNLFLVI
FQRFIMLLTEHLVRCETGSGDISTPWYKNCIERLQQVFLMHHVTIQQYMGTLENLLFTAE
LDPHILAVYQQFCALQL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgaagacgtcacagcgacagcgagaatgagggaagtcagccgcataaaaggagg
agaacatccgagccaattgaaattgaggaccgcctggagtccctaatatgtcgagtaggg
gagaagagtacctcgtctctggagagcaacttggaaggcctggcgggcgtgttggaggcc
gacctcccaaactacaaaaacaaaatcctgcggattttatgttgtgttgcccgcctcctg
cccgagaagctgaccgtgtatacaactctagttggcctcttgaacgcccgcaactacaac
tttggaggcgagtttgtggaggcgatgatcagacagctcaaggagacgctgaaaaacaac
ttgtacaatgaagctgtttacttggtgcgctttttgtcggacttggtcaactgccatgtg
atcgctgcaccgtcaatggtggccatgttcgaaaactttatcagtgttactcaagaggaa
gatgtacctcaggtccggtctgactggttcgtgtacatggtgctgtcctgtctgccttgg
gtcggcaaggagctctacgagaaaaaggacgctgagatggaccgactcctcagccagatc
gaaggctacctcagaggacgagtgaagacgcacgtacccatgctgcaggtgtggactgca
gaaaagccccacccacaagaggagtacctggactgcctctgggcccagatccagaagctg
aagaaagaccgctggcaggagcgccacatccttcgtccgtacatcgccttcgacagcgtg
ctgtgcgaggccctgcagcacaacctcccccccttcaccccgccaggccacatgcccgac
gcccagtacccgatgccccgggtcatcttccgcatgttcgattacaccgacgcccccgag
ggtccggttatgccaggcagccattctgtggagagatttgtcatcgaggagaacctgcac
tgtatcatccagacccactggaaggagaggaaaacatgtgctgcacagttactgagctat
ccggggaaaaataagatcccacttaactatcacatcgtggaggtgatctttggagaactt
ttccagctgccaactccgccccacatcgacgtcatgtacacaacgctgctcattgagctg
tgcaaactgcagccgggctcattgcctcaagtgctggcccaagccacagagatgctctac
atgagactggacaccatgaacaccagctgcatagaccgactaatcaactggttttctcat
catttgagtaacttccagtttcgatggagctgggatgactggtccgactgcctggcagtg
gatctagagaagcccaaacccaagtttgtcaaagaggtcctggagaagagtatgaggctt
tcataccatcagcggatggtggacattgttcctgcaaccttctcagcactcatcccagct
gaacccatcttcatttacaaatacgaagatgagagcgcttcttcgttaccaggttaccca
gcatccatcactgtaggaaacgccataaagaaccgagcgaccaacgaggagatcctgacc
atcctcaaagaagtgcccaaccccaaccaggaggacgacgacgatgagggcgagagcttc
aaccccctgaagatcgacgtgttcctgcagactctcctgcacctggctgccaaatccttc
agccactccttcagcgccctcggaaagttccacgagatcctcaaggccctgacggagcgg
gacgaggggaagctgcacatcctcaaggtggtgtacgaagtgtggaggaatcacccgcag
atgatcgcagtgctggtggacaaaatgatccggacccagatcgtggactgtgctgcggtg
gccaactggctcttctctcaggatatggctcacgagttcaccagactctttgtgtgggag
attctgcactcgaccatccgaaagatgaacaagcacgtccagaagatccagcaggagttg
gaggaggccaaggacaaactggagaaacagcagcacaagcggcagaaggacagcggagac
gaggaggacatggacaagaacagcgaggacgaggagggtcagctggaggagcagatcgag
aggctgcaggagaaggtggagtcggctcagagcgaacagaagaacctcttcctcgtcatc
ttccagcggttcatcatgctgctgacggagcatctggttcgctgtgagactggcagcggg
gacatcagcacgccctggtacaagaactgcattgagcggctgcagcaggtcttcctcatg
caccatgtgaccatccagcagtacatgggaaccctggagaacctgctgttcaccgcagag
ctcgacccacacatcctggccgtgtaccagcagttctgtgccctgcagctctga
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integrated database retrieval system
