Pungitius pungitius (ninespine stickleback): 119210274
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Entry
119210274 CDS
T07626
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04136
Autophagy - other
ppug04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119210274 (atg13)
04136 Autophagy - other
119210274 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119210274 (atg13)
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119210274 (atg13)
Membrane trafficking [BR:
ppug04131
]
Autophagy
Autophagosome formation proteins
ULK complex
119210274 (atg13)
Atg1 complex
119210274 (atg13)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119210274 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
119210274
NCBI-ProteinID:
XP_037315991
LinkDB
All DBs
Position
3:27124001..27129564
Genome browser
AA seq
526 aa
AA seq
DB search
MDSGLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRAGVVGTPV
GTVTLSCAYRTNLAFMSNRSLTRYMQFERSAPIMGIIVDHFVDPPGSGPLTANMGHPCNY
RALDDEDGGPYAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLSKPLPLDSLPLPLAPG
LVTHTLYASRLSYHPQAGAADLCHPAANQALHAAKEQGGVASNPAQPAHGADAHLAAENA
ANTPGDEEPSPSDPLESLNAFTRKIGAFVNKPNTPIQTAAGLDLPFAAFAPRGLDSEDSD
PMVQPPDSPTCPSPLQASLHSQDSEGSGPQDDFVMVDFRPAFSKDDLLPMDLGTFYREFQ
NPPQLASLSLHISSQSMADDLDSLPEKLAVYEKNIDEFDAFVDMLQ
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggcctgagtccccaggataaaaaagacttggacaagttcattaagttcttc
gccttgaagacagtccaggtgattgtccaagcccgtcttggagagaagatctgcactcgc
tcgtcttcatcgcctactggttctgattggtttaatttggccatcaaagacatcccagag
gtgactcatgaagccaagaaggcattggccggacaacttcccggcatcgggcgctccatg
tgtgtcgagatctccctcaagacgtcagagggggactcaatggagttggagacttggtgc
ctggaaatgaatgagaagtgtgataaagacatcaaggtgtcgtatacggtctacaaccgt
ctgtctgtcctgctcaagtctctgctggccatcaccagagtaacgcccgcctacaagcta
tccagaaagcagggtcacgactacgtcatattataccggatttacttcggggaagtccag
ctgagcggattgggagaaggttttcagaccgtgcgcgccggcgtggtcggcaccccggtc
ggcacggtcacgctttcatgcgcctaccgcaccaacctggccttcatgtccaacaggtca
ctgacacgctacatgcagtttgagcggtcggctccgatcatggggatcatcgtggatcac
ttcgtggatcctcccggcagcggcccgctcaccgccaacatgggacatccctgcaactac
agagccctggatgacgaagacggaggaccatacgcgggggttcaggattcacaggaggtc
tgcaccacctccttctccacctccccgccctcacagtgtgtgtgcacgctgagtccttcg
ccctctaaactgtctaagcccctcccgctggacagtctgccgcttcctctggctccggga
cttgtcactcacactctctacgcctccagattatcgtatcatcctcaagcaggagccgcc
gacctctgtcaccctgctgcaaaccaggcgttgcatgctgcgaaggagcaggggggggtc
gcttcgaaccccgcccagcccgctcacggagccgacgcgcacctggcggcagagaatgcc
gccaacacgccgggcgacgaggagccttccccctccgacccgttggagtctctgaacgcc
ttcaccaggaagatcggagccttcgtcaataaacccaacacgccgatacaaacagcagcc
ggtctggacctgccgtttgctgcgttcgctcctcgaggcctggactctgaggacagtgat
cccatggtgcagcctccagactcccccacttgcccgtcacccctgcaggccagcctccat
tctcaggactcagagggatcggggccgcaggatgactttgtcatggtcgactttcgtccg
gccttctctaaagacgacctgctgccgatggatctgggcactttctacagagagtttcag
aaccccccccagctagccagcctctcgctgcacatcagctcccagtcgatggcagacgac
ctggactcactaccggagaaactggccgtttacgagaaaaacattgacgagtttgacgct
tttgtggacatgctccagtag
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integrated database retrieval system
