Pungitius pungitius (ninespine stickleback): 119210277
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Entry
119210277 CDS
T07626
Symbol
aff2
Name
(RefSeq) AF4/FMR2 family member 2
KO
K15194
AF4/FMR2 family member 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119210277 (aff2)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119210277 (aff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
119210277
NCBI-ProteinID:
XP_037315992
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All DBs
Position
2:28695354..28822351
Genome browser
AA seq
1533 aa
AA seq
DB search
MDLFEFDFFRDWELEQPCHLESDRSALKRREWERRNQEVQQDEDLFSTGFNLFGEPYKTN
KGDALASRVQNTLGSYEEMKDLLTSHSNQSHLVGIPKGSNNLQTPTPSAAERPAAECQLF
NEDPRGGAAGGRGAEGGGDKRTANPSSSSSTSMQPPATAASATCTTGIPHQNSKKSSVDW
SRAGHGPGAQGGSVVQGMGPITPAASGRGKMSLLEEQQMQRHDELFISLKDELGLKGDSS
PSSSTSSSSSLSSSGRRHSSLPSKNLPLPDGGNFRSSAMDGAHFKSSSNTENCGHFKSSP
YENEAGSHLSMSSSPLASTSVLTTPTPGLTTPTSGLTTPTFPPGSLSGKPYAIQQKPTAY
VRPMDGQDQVPSDSPQLKPPLVATEGFNNNSQAYGGNTGNAKNKLPKLSLSHTGEVSLPN
DSSCVEEILREMTHSWPPPLTAIHTPGKADQTKFPIPNKESQHVTSGYNTQKRCTISGNK
PAAKPPTAPQKSMLEDDLKISSDEEEAEQQVSDKPKARGTAQSGASGSSSESESSSESDT
DESESSSSDSEYNRSSRTHTPEPEPPSANKWQLDSWLNKVQAQTKPLLPPQPEHGSGTIT
QGPRTFSPRSEAAGVAAAAKTKPCVSSSTPLPAAPPLDHKDARGALCPGREKAKAKLSQK
ASGEGQRSKMRMSPGVLSGPEVTTQRRSTTGKKQPRRTERSNSAEDTPSQTWSRTNQQSP
VAREKDLLPPPSLELQNPPRPRNKPPSGKTAPRKEPRCATNSNNSSVAPPAALPQSAVPL
PAASVNQDKRKHRGPSTKTTPKSREFIETDSSSSSSECHSDSEEALKIPAVPPQAPPPVP
PCLGPAGSLGSFGGKGLRLKEAGTVTTNGSSSSSSSIGGGANGGNTLSIGNITSSFGTSV
PDPGGSGGQRKDPVSVSPPLKVGLEVPRSPLKEYQELQGLWVKIELGLLSRVPCPGSGEG
SRAGLAEKDRVEERDGDRHGERTAAAEKERQKQADREWPGLRERPKLPKVEKRDEHTERL
APDRERQADRDRLPEREKPTDREDRERLGPGERERTTGRDREKGCPGPVLDNPLVPEQSN
PRLAGRTESKHRKQAAGTTAPPSEKHTNKSKRKHKSDHSELSVNGNKKLRLDKDFQLLPP
SISPILDHKNSLTDSLIRKQSRRREDKLLPPLLSPLSDDPPHKRTYDSSSSLGLEGVPSG
TLLCSTSSCTSTSSSSSSHKHRRGEGKASSHSRNASEVNTHGEKPSGDGYHANGQPVSEV
WPEPLMDPGEPRRPRLTFSNTVHCADYYMQEAKRLKHKADALMDKFGKAVNYADGALSFI
ECGNAMERDPLEAKSPYTMYSETVELIRYAMRLKNFTSHSATVAEKKLAVLCNRCLSLLY
LRMFHLKKDHAVKYSRSLMEYFKNSAKSSHQEPSPWRINGKVNGTPSPLSLSPSPAGSGG
AGGGSGGPPGSSGSVAIPQRIHHMAASHVNITNNILRSYEHWETADRLATGSQEFFLELD
SVMEPLGQQSSMTELVRYIRQGLHWLRLEAHLL
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atggatctctttgaattcgactttttcagagactgggagctggagcagccatgtcatctg
gagtcggatcgcagcgccctgaagaggagggagtgggagaggaggaaccaggaggtccaa
caggatgaagacctgttctcaaccggattcaacctattcggagaaccttacaaaactaat
aaaggtgacgcgctggccagtcgcgtccagaacacgctgggttcctacgaggaaatgaaa
gacctgttaaccagccactctaaccagagccacttggtgggaatccccaaaggcagcaac
aacctgcagactccgaccccgtccgccgcggagaggcccgccgcggagtgccagcttttc
aacgaggacccgagaggaggagccgcaggaggacgaggggcagagggaggcggcgacaag
aggacggcaaacccatcttcctcatcttcaacttctatgcagccgcccgccacggccgcg
tcagccacctgcaccacgggaatcccccatcagaactcgaaaaagagctccgtggactgg
tctagggccggccacgggccaggcgcccaagggggaagcgtggttcaggggatggggcca
atcacgccggccgcaagtggaagagggaaaatgtccctgctggaggagcagcagatgcaa
cggcacgacgagctgttcatctcactcaaagatgaactcggtctcaaaggcgactcaagt
ccttcttcctccacttcgtcctcctcttccttatcttcctcagggagaaggcactcttca
ctcccctcaaaaaaccttcctcttccagatggtggcaatttccgatcgtccgccatggac
ggagcccatttcaagtcttccagtaacacggaaaactgtggacattttaaatcctcacca
tatgaaaacgaggccgggtcccacctctcgatgtcctcttccccgctggcttccacgtcg
gttctgaccacgcccacccctggtctaaccactcccacgtctgggctgaccacccccacc
ttcccacccggtagcctgtcggggaagccatacgccattcagcagaagccgacggcgtac
gtccgcccaatggatggccaggaccaggtgccgagtgactcgccccagcttaagcccccc
ctggtggccacggaggggttcaacaacaacagtcaggcctacggaggaaatactgggaac
gccaagaataaactacccaaactgagtctcagccacacaggggaggtcagccttccaaat
gactccagctgtgttgaagagattttgcgggagatgacccattcctggcctcctcccctc
acagccatacacacgcctgggaaggccgaccagaccaagttccccatcccgaacaaggag
tcacagcatgtgacttcaggctacaatacccagaagcgatgtactatatctggtaacaag
cctgctgcgaaaccaccgaccgcaccacagaagtcgatgttggaggatgacctgaagatc
agcagcgacgaggaagaggccgagcagcaggtgtctgacaagcccaaagccagaggcaca
gcccaaagtggagcatcggggagcagcagtgaatcagagagcagctccgagtcggacacg
gacgaatcagagagcagctccagtgacagcgagtacaatcggagctcccgcacgcacacc
ccagagcctgagcccccctccgccaacaagtggcagctggacagctggttgaataaagtc
caagctcagaccaaacccttgcttccccctcagccggaacatggctcaggcaccatcacc
cagggcccgaggactttctctcccaggagtgaagcagcaggagtggcagcggctgccaag
actaagccctgcgtgtccagcagcaccccccttccagctgccccaccgctggaccacaag
gacgcgagaggagctctctgcccgggcagagagaaggccaaggccaagctcagccagaag
gcctccggggagggccagaggtcaaagatgaggatgtcaccaggggtgttgtctgggccg
gaggtcacgacccagaggaggagcaccacggggaagaagcagcccagacggacggagagg
tcaaacagcgcggaggatactccgagccagacgtggagcagaaccaaccagcagagccct
gtggctagggagaaggacctgttgcctcccccctccctggagcttcagaaccccccgagg
ccacgaaacaaaccccccagtgggaaaactgcccccagaaaggagccccgctgtgccacc
aactcaaacaacagctcggttgctccaccagcagcgctgccacagagcgcggtgccactg
ccagctgccagcgtgaaccaggacaaacggaaacacagaggtccgagcaccaaaaccaca
cccaagtcccgcgaattcatcgaaacggactcgtcctcctcgtcctccgaatgccactcg
gattcagaggaagccctcaagatccctgcggtgccgccacaggcgccgcctcctgtcccc
ccgtgcctcgggcctgcagggagcctggggtctttcggaggaaagggactccgactcaag
gaggccggtaccgtgacgaccaacggtagcagcagcagcagcagtagcatcggcggcggt
gctaacggcggtaacaccctgagcattggcaacataaccagttcattcggcacttctgtg
cctgatcccggagggtcgggaggtcagcgcaaagacccggtgtctgtgtcgccgcctctc
aaagttggacttgaggtgccccggtcacccttgaaggaataccaagagctccagggtttg
tgggtgaaaatcgagctgggtttgctgagcagggtaccctgcccgggctcgggggaaggg
tccagagcgggtctggcagaaaaggacagggtcgaggagagggacggggacagacatggg
gagaggacagcggcggccgagaaggagagacagaagcaggccgatagagagtggccgggg
ctgagagagaggcccaagctgccgaaagtggagaaacgggacgaacacaccgagcggctg
gcgccggacagggagaggcaggcggacagagacagactgccggagagggagaagccgacg
gacagagaggacagggagcgactgggacccggcgagagggaacggacgacggggagggac
agggagaaggggtgcccaggcccggttctggacaaccctcttgtgccagagcagagtaat
ccccggctcgcagggaggacggagagcaaacaccggaagcaggcggctggaaccacggcg
ccgccatcggagaaacacaccaacaagagcaagaggaaacacaagtcagaccacagtgag
ttgtcggtcaacggcaataagaagctgcgattggacaaagacttccagctgctcccgccc
tccatctctcccatactcgatcacaagaacagcctgacagactcgctaatcaggaagcag
tctcggcggcgtgaagacaagctgctgccgcccctcctgtcgccgctctccgacgatcca
cctcataaacggacctacgacagcagttcctctctcggcctggagggcgtcccctcgggg
accttgctctgctccacctcctcctgcacttccacttcctcttcctcttcctcgcacaaa
cacaggagaggggaaggcaaggcgtcgtcacactcgaggaacgccagtgaagtcaacacc
cacggtgagaagcccagcggagacggttaccatgccaacggacagccggtctccgaggtg
tggccggaaccactgatggaccctggagaacctcgcaggccccgactgacatttagcaac
acagtccactgtgctgactactacatgcaggaggccaagagactgaagcacaaggcagac
gctttgatggataaatttggtaaagcggtgaactacgcagacggcgccctctccttcata
gagtgtgggaatgctatggagcgagatccactggaggccaagtccccgtacaccatgtac
tctgagaccgtggagctcatcaggtacgccatgaggttgaagaacttcaccagccattca
gccaccgtcgctgagaagaagctagctgtgctgtgtaaccgctgtctgtctctgctgtat
ctgaggatgttccatttgaagaaagaccatgctgtcaagtactcccgatcgctcatggag
tacttcaagaattcagccaagagttcccaccaagaaccctctccctggaggatcaatggg
aaggtcaacgggaccccgtcgcccctctcgctcagcccctccccagccggcagtggaggg
gcgggcggaggctccggagggcccccgggctcgtcaggaagcgtggccattcctcagcgg
attcaccacatggctgccagtcacgtcaacatcaccaacaacatcctgcgtagctacgag
cactgggagacggccgacaggctggccaccggcagccaagagttcttcctggagctggac
tcggtgatggagccgctgggtcagcagagcagcatgacggagctggtgagatacatcagg
cagggactgcactggctccgcttagaggctcacctgctgtag
DBGET
integrated database retrieval system
