Pungitius pungitius (ninespine stickleback): 119210411
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Entry
119210411 CDS
T07626
Symbol
vimr2
Name
(RefSeq) desmin
KO
K05640
glial fibrillary acidic protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119210411 (vimr2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119210411 (vimr2)
Membrane trafficking [BR:
ppug04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
119210411 (vimr2)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
119210411 (vimr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
CENP-F_leu_zip
DUF7801
FlaC_arch
Sec3_CC
DUF4337
FlxA
Motif
Other DBs
NCBI-GeneID:
119210411
NCBI-ProteinID:
XP_037316246
LinkDB
All DBs
Position
2:complement(19446936..19459951)
Genome browser
AA seq
383 aa
AA seq
DB search
MAALRVSSYRKLFEDDGGLGTQCAGQYRASVRGAAVDECHCVQFDFVAAKALNKEGLQRF
VQDRHIVAALNDRLVRLIQLAHCFEEENESLKSQIVDVEKKLNGRQGSASVSCAEADRSL
DAAVERLRREKDDIQCDTENLQKELEHLMEEYEKAAQQKILLQQGQQDVAKDVDAVTAEC
LALREQVAIYEQQLANMEDQHTTAVQRLLGPAEGTTGSTAAITFCSPDITPALDVKEHYC
QLAESLQYECGAPSSAVSRRGDGRQIEEGVAGGSAVKGASKMKDISEIKMLVSELQKALA
ELEQCNEELEDEVDMKAAAYMDEIAELECTIDEIRRQEADFQVQMKQQCEDYKELFSEKM
ARDMEITAYRSLLAEEEERLCNL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgctccgagtgtcgtcctaccgcaagctgtttgaggatgatggaggtttgggt
acgcagtgtgcagggcagtaccgcgcctccgtaaggggtgcggccgttgacgagtgccac
tgcgtccagtttgactttgtagctgccaaggcactcaacaaggagggtctccagcgcttc
gtccaggaccgccacatcgtggctgccctcaatgacagactggtccggcttatccaactg
gcccattgttttgaggaggagaatgagtctctgaaaagccagattgtcgacgtggaaaag
aagctgaacggtcgacaggggtcggcgagcgtctcctgcgccgaggccgaccgcagcctg
gatgcagcggtggagcgactgcgcagggagaaggatgacattcagtgtgacaccgagaac
ctgcagaaggagctggaacatctgatggaagaatacgagaaggctgcacagcagaagatc
ctcctgcagcagggacaacaagatgtcgctaaggatgtcgatgctgtgacagcagagtgt
ttggctctgagggagcaagtggctatctacgagcagcagctggccaacatggaggaccaa
cacacaacggcggtgcagcgtctgctgggacccgccgaagggaccacggggtcaacggca
gccattactttctgcagccctgacatcacgccggccctggatgtgaaggagcattactgc
cagctggctgagagcctccagtacgagtgcggcgctccctcctcggctgtgagtcgccgt
ggcgacggaagacaaatagaagagggcgtagctggagggtcggccgtcaaaggcgcgtcg
aagatgaaggacatcagtgagataaagatgctggtttcggagctacaaaaggcgctcgct
gagctcgagcagtgcaacgaggagctggaggacgaggtcgacatgaaggcggctgcatac
atggacgagattgctgagttggagtgtaccatagatgaaattcggcggcaagaggccgac
ttccaagtgcagatgaagcagcagtgtgaagactacaaggagctgttcagtgagaagatg
gccagagacatggaaattactgcctacaggagtctgttggccgaagaggaggagaggctg
tgcaacctgtga
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