Pungitius pungitius (ninespine stickleback): 119210481
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Entry
119210481 CDS
T07626
Symbol
trim24
Name
(RefSeq) transcription intermediary factor 1-alpha
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ppug01001
]
119210481 (trim24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119210481 (trim24)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119210481 (trim24)
Protein kinases [BR:
ppug01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
119210481 (trim24)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119210481 (trim24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
PHD-1st_NSD
PML_CC
zf-C3HC4
DUF7615
Motif
Other DBs
NCBI-GeneID:
119210481
NCBI-ProteinID:
XP_037316429
LinkDB
All DBs
Position
2:complement(8094962..8106523)
Genome browser
AA seq
1089 aa
AA seq
DB search
MDESIENVDNDDIVIIVENEAESLPAEDDRLKPQGAFGLMDTCPICKLSFHNREPKLLPC
LHSFCKRCLPVPFRSADPRRDSQGQVDSKSLGAVRCPVCRQECWEMDMLDNFFVKDSAEV
PSSTMEKSSQLCISCEDNTEATGYCVECVEFLCVTCIEAHQRVKFTRDHTIRQKEEMSPE
ALGVSTQKPVFCDIHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLDDAYRNHKQHLE
NMTQQLQEKRKAIEDVSSCISSGLQHVEENRKAVTNEIKKSICNLIMEINRKGKILVNQL
EALTKDHELGLKKQQDDVNSLSRHLDHVISFTKWATASHSGTALLYCKRLILFQIHYLMR
ASCNPSIVPQSSVRFQCRSGFWATNVDLGSLVVERGQSRTPITNHPAGPRAEAPTGGLSA
SAQQIVRQSTLAQLQMHVDKLAQQPTRQPPPNHWSWYQNARVPGHPGHPPPTRPSHGGSS
PSQGPPTLGQPGRRYGSSYANPRSPTSSMLHNTGFPPAQSLRDLIHSSSFPPKPMDVLQG
TSRYPQPLSAGAAAQMSLQQRGLTESSFLKRSEAGGSVPSITISIPKPSFAPNLASATTD
KTSAFNTAVQARQNSPMAKPSSSDRATGTTSWRQSSEPPSAKRRRRSSPGPVIVIKDEPE
DEDDVRFVQSSVGSSLPDSSTGAQSKPRQQPKAPTPATAPEAESGAESSGAVQEPRGQPA
AQPESEKMPVPEEDPNEDWCAVCQNGGELLCCDKCPKVFHLACHIPALNESPSGEWFCSL
CRDLASPEMEYVCDSKDDPVSEGFPPHGRRKCERLLLRLFCNDFSTDFQQPAAPSETRRY
KELIKTPMDLSIVKKKLESKSAEGEGYSGPEECVADIRLIFFNCAKYYKATSEVGSAGLY
LEDYFEEQLKLVFPDTMFAGGREEQMIPPLEEEIDEEEEMVAEGAAPVKDDKPQSPADKG
IPPVEEDLPPLEEGTALAEEARSETEEKVSDASKKGTEDEEEEEVVAVPSAAVDPPPAEE
AKEDEEIPAEETECSLAVEAETKEEESPKSPKEEEPQLPTDTDVHRPEGREKSAPADEAN
KEEEEEQEG
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagtattgaaaatgttgacaacgacgacattgtcatcattgtcgaaaacgag
gcggaaagtttgccagcagaggacgacaggctgaaaccgcaaggcgccttcgggctcatg
gacacctgtcccatctgcaagttgagcttccacaacagagagcccaaactcctgccgtgt
cttcactccttctgcaagaggtgtctccctgtcccctttagaagtgccgacccgaggcgg
gactcccagggtcaagtggacagcaaatcattgggcgccgtgcgatgtccagtatgcagg
caggaatgctgggagatggacatgttggataatttcttcgtgaaggactccgctgaagtc
ccgagcagcaccatggagaaaagcagccagttgtgcatcagctgcgaagacaacacagag
gcgacgggttactgcgtggagtgtgtggagtttctgtgtgtgacgtgtattgaggcgcac
caaagggtcaagttcaccagggatcacaccatacgccagaaggaggagatgtctccagaa
gcattaggtgtgtccacacagaagcctgtgttttgtgacatccacaagcaggagcccctg
aagctgttttgtgagacgtgtgaccggctcacatgtcgggactgtcagctgcttaagcac
aaggatcacaactaccagtttttggatgatgcataccggaaccacaagcagcatctggag
aacatgacacagcagttgcaagagaaaagaaaggccatcgaggacgtgtccagctgtatc
agctctggactccagcatgtcgaggaaaaccggaaggccgtcaccaatgaaataaaaaag
tccatctgtaacttgatcatggaaatcaacaggaagggaaagattctggttaaccagctt
gaggctctgactaaagaccacgagctgggtttgaaaaagcagcaagatgacgtcaactcc
ctgagcaggcacctcgaccacgtcatcagcttcactaaatgggccacagccagccacagc
gggacggccctgctgtactgcaagagactgatacttttccagattcattacctgatgaga
gcaagctgtaatccctccatcgtccctcagagttctgttcgctttcagtgtcgctctggc
ttctgggccaccaatgtagacctcggttctttggttgtagaaaggggccagagccggacc
cccatcaccaaccacccggcaggtcccagagcagaagcgcccactggaggactttccgct
tcagctcagcagatagtgcgacagagcacattggctcagctgcagatgcatgtggataag
cttgcccagcagcctaccagacaaccccccccgaaccactggtcctggtaccaaaatgcc
cgggtcccagggcacccggggcatccacccccaaccagacccagccatggtgggtcctcc
ccgtctcaaggccctccaaccttgggacagccgggacgcagatacggaagctcctacgcc
aacccgagaagccccacgtcgtccatgcttcacaacacaggattcccacctgctcagtct
ttgagagatctgatccatagctccagcttccctcccaaaccaatggatgtgttgcagggt
acatcccgctacccacagcctctttctgcaggagcagctgcacagatgtcactacaacag
cggggcctaacggagtcctccttcctgaagaggagtgaggctgggggatccgtgccatcc
atcaccatctctattcccaaacccagctttgctccaaatctcgcttccgcaactacggat
aaaaccagtgcatttaacacggcagttcaagcaaggcaaaactcgccaatggccaaacca
tcttcctcagacagggccacagggacgacttcctggaggcagagctccgagcctccgtcg
gccaagcggcgaagaaggtcgtcccctgggcccgtcattgtcatcaaggacgaaccagag
gacgaggatgatgttcgatttgtgcagtccagtgttggctccagcctgccggacagcagc
accggcgcccagtcgaagcctcgccagcagccaaaggcccccactccggccacggcgccc
gaggcggagtccggagcggagtcgagcggcgcagtccaagagccacgtgggcagcccgcg
gcacagcccgagtcggagaagatgccggtgccggaggaggatcccaacgaggactggtgc
gcggtctgtcagaacgggggcgagctgctctgttgcgataagtgtcccaaagtcttccac
ctggcctgccacattcccgcactgaatgagtcccccagcggggaatggttctgttcgctc
tgccgagacctcgcctctcccgagatggagtacgtctgcgacagcaaggacgaccccgtc
tctgaggggttccctcctcacggaagaaggaagtgcgagaggctgctgctccgtctgttc
tgcaatgacttcagcaccgacttccagcagcccgctgctccatcagagacgagacggtac
aaagagctgatcaagaccccgatggatttgtcaattgtgaagaagaagctggagtcaaag
tcagcagaaggggaaggttacagcggcccggaggagtgcgttgcagacatccggctcata
tttttcaactgtgcaaagtactacaaggcgacctcggaggtggggagtgcaggcttgtac
ttggaggactacttcgaggagcagttgaaactagtcttccccgatacgatgttcgccgga
gggagggaagaacagatgattcctcccctggaagaggagatagatgaagaggaagagatg
gtggcggagggcgcggcccccgtaaaagacgacaaaccacaaagtccggcagataaggga
attccgcctgtggaagaagacctgcctcctctggaagaaggaacggcactcgccgaggaa
gcaaggtcagagacggaggagaaggtgagcgacgcaagcaaaaaggggacggaggatgag
gaggaggaggaggtggtggcggtgccatctgctgcggtggatccacctcctgcagaggag
gcaaaggaggacgaggagattcctgccgaggagacggaatgctccctggctgttgaggcc
gagacaaaagaggaggaatctcccaaatccccaaaagaggaggagccgcagctccccacg
gacacggacgtgcatcggcctgaaggccgggagaagtcggctcccgcagacgaagccaac
aaggaggaggaggaggagcaggagggatag
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