Pungitius pungitius (ninespine stickleback): 119210511
Help
Entry
119210511 CDS
T07626
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119210511 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119210511 (cstf2)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
119210511 (cstf2)
U7-dependent histone pre-mRNA processing factors
119210511 (cstf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
119210511
NCBI-ProteinID:
XP_037316497
LinkDB
All DBs
Position
2:complement(19264409..19271963)
Genome browser
AA seq
519 aa
AA seq
DB search
MANLAAAAAAAAAAALAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRL
VYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTG
APIIESPYGDNIQPQEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQ
LAYALLQAQVVMRIVDPEIALKMLHRQTPVQPLISSGPVGGAPPLNPPSLPPSAPPSQPQ
PGPGMHVNGAPQMMQPPNMGVVPGPMPVPGPGPGQGPLPGPVGPPGNLQHSPTGSSGQAA
IERPQESQDTRPGGIPPRGLLGDGPNDPRGGTLLSVTGEVIEPSRGYMAPPPPHQAPPVH
MSQMPGGPPPDMRGPPMDMRGPPMGEPRNMMGDPRGPPMMEPRGPPMETRGRDPRAMDAR
GPVTGQRVPMATGMQAPVPHNMGQNAPPRPGPGISGGPPSGGGFSPGQGQVSTQDQEKAA
LIMQVLQLTPEQIAMLPPEQRQSILILKEQIQKTAGGAP
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacttagccgctgctgctgcggccgccgccgccgccgccctcgccgcgaacaga
gacccagccgtcgatcgatcactgcgatcggttttcgttgggaacattccgtatgaggct
acagaggagcagctgaaagacattttttctgaagtggggcttgttgtcagcttcaggttg
gtgtacgacagggaaacgggaaagccgaagggatatggcttctgcgaatatcaagaccag
gagacggccctcagtgccatgcggaacctgaacgggagagagttcagtggccgggccctg
cgtgtcgacaacgcagccagcgagaaaaacaaggaagagctcaaaagtttgggaacgggg
gcccctatcatcgagtccccttatggagataacatccagccacaagaagctccggagtcc
atcagcagagctgtggccagtctgccccctgagcagatgtttgaacttatgaagcagatg
aagctgtgtgtgcagaacagtccccaggaggcgaggaacatgctgctgcagaacccccag
ctggcctatgctctgctgcaggcccaggtggtcatgcggattgtcgaccctgagatcgcc
ttgaagatgctccaccgccagacgcccgtccagcctctgatttccagtgggccggttgga
ggagcgccgccgctcaacccgccttccctcccgcccagcgcgccgccgtcccagccgcag
cccgggcctggaatgcatgtcaatggagcccctcaaatgatgcagccccctaacatggga
gtggtccccggaccgatgcctgttccaggaccgggaccgggacaagggccgttaccagga
ccagtcgggcctccaggaaaccttcagcattctcccacaggatcgtctgggcaagctgct
atcgagcggcctcaagagtcacaggacacaagaccaggcggcatcccccccagaggcctg
ctgggcgacggccctaacgaccccagaggaggaactctactgtctgtcacaggggaggtc
atagagcccagccggggttacatggcacctccgccgccccatcaagccccacctgtgcac
atgagccaaatgccaggtggaccccctccggatatgagaggacctccaatggacatgaga
ggcccgcccatgggtgaaccacgcaacatgatgggggaccccagagggccccctatgatg
gagccccgcggccccccaatggaaaccagaggtcgcgacccgagggcgatggacgcacgt
ggtccagtgactggccagagggttcccatggcgactggaatgcaagctcctgttcctcat
aacatgggtcaaaacgctcctccaagaccgggtcccggtatctccggcggccccccatca
ggaggcggcttcagtccggggcagggccaggtctccacacaggaccaggagaaggctgcc
ctgattatgcaggtcctgcagctgaccccagaacagatcgccatgttgcctccagagcag
cggcagagcatcctcatcctcaaagagcagattcagaagactgcaggcggggcgccgtaa
DBGET
integrated database retrieval system
