Pungitius pungitius (ninespine stickleback): 119210554
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Entry
119210554 CDS
T07626
Symbol
tbc1d10c
Name
(RefSeq) ecotropic viral integration site 5 ortholog isoform X1
KO
K19944
TBC1 domain family member 10
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119210554 (tbc1d10c)
Membrane trafficking [BR:
ppug04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119210554 (tbc1d10c)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
119210554
NCBI-ProteinID:
XP_037316591
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All DBs
Position
2:22222184..22229271
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AA seq
1197 aa
AA seq
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MLNNDSLLSSDSKMLSPTSADQKNLSVDSSGSDGESEVGQEPETDRFGFILTNGSAAGSV
GPPPELVRHRETKWINIIGQWDRLLLKKTSKVKVQCQKGIPASLRAKCWPLMCGATDKMK
QSPELYKSLDVQPALQSWVDVIERDLDRQFPFHEMFLSKDGHGQRGLFRVLKAFTQYQPE
EGYCQAQGPVAAVLLMNMPAEEAFWCLVEISEQYLPGYYSPLLEGVLFDAAMLNWVLKRT
CPAAHKHLQRHGVEPLMFATDWLMCLYTRHLPFNTLLRVWDLFFCYGVRVLLQVAVVLVR
RVLGRAELRKQCQGQMETLERLRGVREEVQEEDNAFIAEVCSVQLSGRDLQKQTEKELER
WRKDRPSSTFDPRGRCHGYRMAWARAREKEAERDQKERQKGNLSVSLARSASTLSLSPSL
LHKRGKKVGKANTREWEGGGGRVVRHFSMGAKEDWRSRTEFNFKMVPRVQEEDDAVSEGH
EEQREVKLTEEREQKELLEEPEMIEIHNVPTEHVGEAVIAEQRLGRGETSATAKEDQLIG
TEEGRGISEQEEETNVETHKSEGPTKDLTAEHKQRDELHSNSRTHVLEQQRKQIQHLEIH
GKDQEAENQLTGGGRAKAEVENQPEMMEDADADKTKDVEAQEGAPPSKEQMIQVDVEPVE
STETENERKTQADTGPTETSPGSEVDSRVEAPTITDPPGETDPQQKVVAETEASSAGDTL
EHNHHSGESLTETGPKEESHTQTKTIELTQTQEELEENPATQESETEIVQTVSERHIDSK
TEAETLILCSPRYIQSEDCTDLAAHTETEVETPNHTVTESSVEECDADASEPSQDEEGRR
LGEHSEAQAAPTQAEERENTNLIAAPQDEEDEEVTRAEAGPLTAAGPDGKTSSEETSSSE
EPAPEQPSISQDTVGAVEEERTETPLQNTVGDDVVPISTKPTDPPNADRTLEVQDKESHL
LSDQAEPVHRGLTPATGHRSSRSSGDICVRKSSNSSGSRLARRLSADLFIVPEKTGQSQS
TPNQLVKVKPGQLQSDPGAVNPTQSPPDATSEVSPSLSADVTPAVQLDTPKRSFGLFRRL
RGEQPKKAPKMQIPKILIQDFSDVTGTGKPVEKEGEEKLSSRERRRRRRDRERREKEEER
LKKKREKELGKEKEGERRKPQTRGKSFQVQREKGSSDATQPAQTGSQKPSSYAESYF
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgctgaataatgacagcctcctctcttctgacagtaagatgttaagtccaaccagtgca
gaccagaagaacctcagtgtggacagctctggatctgatggagagtcagaggttggtcag
gaacctgagaccgaccgcttcggcttcattctgaccaatggatccgctgccgggagtgtg
ggcccaccacccgagttggtcaggcacagggagaccaaatggataaatatcattggccaa
tgggatcgcctcttgctgaagaagaccagtaaggtcaaagtgcagtgtcagaaaggcatc
ccggcctctctgcgggccaagtgctggcctctgatgtgtggagctactgacaagatgaag
caaagcccagaactctacaagtctttggacgtgcagcctgctctgcagagctgggtggac
gtgatcgagagagacctggatcgacagttcccttttcatgaaatgttcctttcaaaggat
ggacatgggcagcggggcttgttccgggtgctgaaagctttcactcagtaccagccggag
gagggttactgccaggcacaggggcctgtggctgcagtgctgctgatgaacatgcctgct
gaggaggccttctggtgtctggtggagattagtgagcagtacctgcccggatactacagc
cctctgctggaaggagtcctgtttgatgcggccatgttgaactgggtcttgaagaggacg
tgtccagctgcacacaaacacctgcagcgccacggagtggagcccctcatgttcgccacg
gactggctgatgtgcctctacacacgccacctgcccttcaacacgctgctccgagtctgg
gacctctttttctgctacggggtgcgggtgctgctccaggtggcggtggtgctggtgcgt
cgggtgctgggccgggccgagctgaggaaacagtgtcagggccagatggagactctggag
aggctgagaggcgtcagggaggaggtccaagaggaagacaacgctttcattgccgaggtg
tgctcggtgcagctgtcagggagagatctgcagaagcagacggagaaggagttagaaagg
tggaggaaagacagaccgtcgtcgacattcgaccccagaggtcgctgccatggataccgg
atggcgtgggcgagggcacgagagaaggaggcggagcgggaccagaaagagagacagaag
gggaacctgtccgtctctctcgctcgctcggcctccactctctcactgtctccatccctc
ctccacaagagggggaagaaagtgggaaaggccaacacgcgcgaatgggaaggcggtggc
ggacgagttgtgaggcatttctccatgggagcgaaggaggactggaggagccgcacagag
ttcaattttaagatggtgccgcgcgtccaagaggaggacgacgcagtttcagagggccac
gaagaacagagggaggtgaaactgacggaagagcgggaacagaaagaacttttagaagaa
cctgaaatgattgaaattcacaacgtgccgacagagcacgtaggagaagcggttatcgca
gaacagcggcttggacgaggggaaacaagcgccactgcgaaggaggaccaactcatcggg
actgaggagggcagagggatttcagaacaggaggaagaaacaaatgtggagacgcacaaa
agtgaaggtccgaccaaagatctgaccgctgaacacaaacagagagacgagctgcactcc
aacagccggacacacgtgctggagcagcagaggaagcaaatccagcatctagaaattcat
gggaaagaccaagaggcggaaaaccaactgacaggaggcggacgtgcaaaagctgaggtg
gaaaatcagcctgagatgatggaagatgctgatgcagataaaaccaaagacgtggaggcg
caagaaggtgcacccccaagcaaggaacagatgattcaggtcgacgtggaaccagtggag
agcacagaaactgaaaatgagcgaaagactcaggcggacacaggcccaaccgagacaagc
ccaggctcagaggtggacagtcgagtcgaagctccaaccatcacagatcctccaggagag
acagatcctcaacagaaagtagtcgcagagacggaggcaagctcagcgggagatacatta
gaacacaatcaccacagcggtgagtcgttgaccgaaacaggcccgaaggaagagtctcac
acccaaacaaaaactattgaactgacccagactcaggaggagctagaagaaaatccagcc
acacaggaatcggagactgaaattgtacaaacggtttcagaacgacacatagactcaaag
acagaggcagaaacattaatactttgctcaccgcgatatattcaatcagaagactgcacg
gacctggcagctcatacggagactgaagtagaaacaccaaaccacacggtgacggagtca
agcgtcgaagagtgtgatgcagacgcttctgaaccttcgcaggacgaagaaggtagacgt
ttgggtgaacactccgaggcacaggctgctccaacgcaagcagaggaaagggagaatact
aacttgatagcagctccacaggacgaggaagacgaggaggttacacgggcagaagcaggg
ccgctcacagccgccgggcctgacgggaagactagttcagaagaaaccagcagctcagaa
gagcctgcacctgaacaaccgtccatctcccaggacacagtcggtgccgtagaggaggaa
aggacagaaactcctctgcaaaacaccgtaggagacgacgtagtccccatttccaccaaa
ccaacagacccaccaaatgctgacagaaccctggaggtccaggacaaagaatctcatctt
ctgagtgaccaggctgagccggttcacaggggcctgacaccagccaccgggcatcgaagc
agcaggtcttctggggacatctgcgtccgcaagtcgtccaactccagcgggtccaggttg
gcgcgtcggctctctgcagatctcttcatcgtgccagagaaaaccggccaatcacaatcg
actcctaatcagttagttaaggttaaacccggccaattacaatccgaccccggagcggta
aatccaacccagagtcctcctgacgcaacttcagaagtctccccgtctttgtctgcagat
gtgactccagcggttcagcttgacaccccgaaacgctcgttcggtctcttccgcaggctg
aggggagaacagcccaaaaaggcacccaaaatgcaaatccccaaaatcttgattcaggac
ttcagtgatgtaacaggcacggggaaaccggtcgaaaaagagggagaagagaaactaagc
tccagggagaggaggaggcggcggagggaccgagagagacgggagaaggaggaggagagg
ttgaaaaagaagagagagaaggagctggggaaggagaaagaaggagagaggaggaaacca
cagacgagggggaagagtttccaggtgcagagagagaaagggagcagtgatgcgactcaa
cctgcacagacggggtcacagaagccttcttcttacgctgaatcgtacttttga
DBGET
integrated database retrieval system
