Pungitius pungitius (ninespine stickleback): 119210642
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Entry
119210642 CDS
T07626
Symbol
pspc1
Name
(RefSeq) paraspeckle component 1
KO
K24993
paraspeckle component 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119210642 (pspc1)
Spliceosome [BR:
ppug03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
119210642 (pspc1)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
119210642
NCBI-ProteinID:
XP_037316750
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Position
3:26793810..26804895
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AA seq
548 aa
AA seq
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MANRNMHQATMQSGNSPQPVKSGSESPAAPSPANKDSPHPQQQSPAAGGAEGAGGEAESV
EEAREEMTFDIKSFRKPGEKTFTQRSRLFIGNLPADLPEEELRNMFAKYGNIGEVFINRD
RGFGFIRLETRTLAEIAKAELDGSVVKNRQIRVSFATHTAALTVRNLLPSVTNELLEQAF
SEFGPVERAVVVTDDRGRPTGKGIVELANKAAARKALERCTEGALLLTTTPCPAIVEPSE
HFDNEDGQPEKSLQKSAAYYKEREQKPHFAQPGTFEFEYSSRWRALHEMEKQQKEQVDKN
IKEAQGKLEAELESAKHEHQLMLMRHDLMRRQEELRRLEELRNQELQRRKQIEMRHEDER
RRREEEMMRHREQEDLRHNPDGFKPNYVDNKEQEMRVGELGPRGAINLGDGFNQGSPGPA
GNQGQMMGLSGRGGAVGTEGAGNMGTAVMSENRAMRKDRYPQAGSMGGRPEVESPKPQQQ
QQQQQLQQQQQQQQLQQQQQQQQQLQQQQQQQQQQLQQQQAALGPQAQGRGSPVGGAFDG
PNNKRRRC
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccgaaatatgcaccaagcgactatgcaaagcggcaattcccctcaaccggtg
aaaagcgggagcgaatccccggctgctccgtcaccggcgaacaaagacagcccgcatccg
cagcagcagtcccccgcagccgggggagccgaaggagccggcggagaagcagaaagtgtc
gaagaggcacgggaggaaatgacctttgacatcaagagttttcggaagcccggcgagaag
acgttcacgcagcgctcgcgccttttcatcgggaatctcccggcggacctcccggaggag
gagttgaggaacatgttcgccaagtacgggaacatcggcgaggtcttcatcaacagagac
cggggcttcggctttatccgcttggagactcgcacgctggcagagatcgctaaagccgag
ctggacgggagtgttgtgaagaatcgacagatcagggtcagctttgccacgcacacggcc
gccctcaccgtgcgcaacctgttgccttcggtaacaaacgagctgctggagcaggcgttt
tccgagttcgggccggtggaacgggccgtcgtcgtgacggacgaccgcggacgccccacc
gggaagggcatcgtggagctggcgaacaaagcggccgcgcgcaaagccctcgagcgctgc
acggagggggcgctgctactgaccaccacgccgtgtcccgccatcgtggagccttcggag
cacttcgataacgaggacggacagccagaaaagtcgctgcagaagtctgcggcgtactat
aaggaacgagagcagaagccccattttgctcagccggggacgtttgagtttgagtattcg
tctcgctggagggctcttcacgagatggagaaacagcaaaaagagcaggtggacaagaac
atcaaggaggcacaggggaaactggaggctgagctggagtcggccaaacatgaacatcag
ctcatgttaatgagacacgatctcatgagacgtcaggaggagctgaggagactggaggaa
ctccgcaaccaggagctgcagagaagaaagcagatagagatgaggcacgaagatgagcgg
aggaggagagaggaggagatgatgagacacagagaacaggaggatctgagacacaaccca
gatggcttcaaaccaaactacgtggataataaggaacaggaaatgagagtgggtgagctg
ggccctcgtggagccattaatttgggagatggctttaaccagggctccccggggcccgct
ggcaaccagggtcaaatgatgggcttgagcggaaggggaggagccgtcggcacggagggg
gctggaaatatggggacagcagtcatgtcagagaatagagccatgcggaaagaccgatac
ccgcaggctggatcgatgggggggcggccagaagttgagtctccaaagccgcaacaacaa
caacaacagcaacaactgcagcaacaacaacagcagcaacaactgcagcaacaacaacaa
cagcagcaacaactgcagcaacagcaacaacaacagcagcaacaactgcagcagcagcag
gccgcactgggccctcaagcccaagggagggggagtccggtcgggggggccttcgatggg
ccgaacaataagcgccgcagatgttga
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