Pungitius pungitius (ninespine stickleback): 119210719
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Entry
119210719 CDS
T07626
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03420
Nucleotide excision repair
ppug04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119210719 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
119210719 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119210719 (cul4b)
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119210719 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119210719 (cul4b)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
119210719 (cul4b)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
119210719 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
119210719 (cul4b)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119210719 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
COG5_C
Motif
Other DBs
NCBI-GeneID:
119210719
NCBI-ProteinID:
XP_037316901
LinkDB
All DBs
Position
2:19495165..19503530
Genome browser
AA seq
860 aa
AA seq
DB search
MFPTGLSSPIPPPPPTQEARPLNTDVKNDGVSITSPKKRKINGSERDDAAEPISSSPPKT
LNSSSSSSSSSSSSSPTPLHIHKKLRFEDSADLIGLDVKMSEEAAAAASCSNNRSKAAGH
HANGLTKPCSGIFSSSKPGAAKKLVIKNFKEKPKLPENYTQETWQKLKEAVEAIQNSTSI
KYNLEELYQAVENLCSHKISAKLYKQLRAACEDHIKAQIDQFREDALDSVLFLKKINKCW
QDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGILLL
VERERSGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEY
LHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTTTLQKGLTHLLDENRIQDL
SLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHVIDVC
FTKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKIMII
FRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDME
LSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEIFKTFYL
GKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKLATGI
EDSELRRTLQSLACGKARVLTKLPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVE
EQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPADLKKRIESL
IDRDYMERDKENPNQYNYVA
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttatcttcccctattcccccaccaccgccaacccaggaggccaga
cccttgaataccgatgtcaaaaacgacggcgttagcatcacgtctccgaagaagaggaaa
ataaacggctccgagagggacgacgccgccgagccgatctcctcttcgccccccaagacc
ctgaattcctcctcctcgtcgtcctcctcctcttcttcttcttctcccaccccgctgcac
atccacaagaagttgaggttcgaggattcggcggatctcatcgggctggatgtgaagatg
tccgaggaggccgccgccgccgcttcgtgctccaacaaccggagcaaagccgcgggacac
cacgccaacgggctgacgaagccctgcagcggcatcttctccagcagcaagcccggtgct
gcgaagaaactagtcatcaagaactttaaagaaaagcccaagttgcctgagaactacacg
caggagacctggcagaagctgaaggaggccgtggaggcgatacagaacagcacctcgatc
aagtataatctagaagagctctatcaggctgtggagaacctttgctcccataagatatct
gccaagctttacaaacagctgagggctgcgtgcgaggaccacatcaaggcacaaattgat
caattcagagaggatgccctggacagtgtgcttttcttaaagaaaatcaacaagtgctgg
caagatcactgcagacaaatgatcatgatcaggagcatatttctgtttttggaccgcacc
tacgttttacaaaattcaatgctgccgtcgatctgggacatgggcctggagctgttcagg
ttctacatcatcagtgacctgaaggtccagagcaaaaccatcgacggcatcctgctgctc
gtcgagcgggagcgcagcggcgaggcgatcgaccgcagcctgctgaggagcctgctgagc
atgctctccgacctgcagatttatcaggactcctttgagcaacgcttcttggaggaaacc
aatcggctgtatgctgcagagggacagaggctgatgcaggagagagaggtaccagaatat
ctccatcacgtcaacaagcgcttggaagaggaggcagaccgggtcatcacgtatctagac
cagagcacgcaaaaaccgctcattgcaacagtggagaagcagcttctgggggaacatctc
acaactaccctgcaaaaagggctgactcacctgctggatgagaacagaattcaggacctg
tctcttctctatcagctcttcagtcgagtgcgaggcggcgttcaggtcctcctgcagcac
tggatagagtacataaaggctttcggaagcacgatcgtgatcaacccggaaaaggacaag
acgatggtacaggagctgctggacttcaaggacaaggtggatcacgtcatcgacgtctgc
ttcacgaagaacgagaagtttgtcaacgccatgaaggaggccttcgaaacgttcatcaac
aagcggccaaataaacccgcagagctcatagcgaaacacgtggattccaagctaagggcg
ggaaacaaagaagcaacagacgaagaactggagaagatgctggataagatcatgataatc
tttagattcatctatggaaaagatgtttttgaggccttttataaaaaggatctggccaag
aggctgctggttgggaaaagcgcctctgtggacgctgaaaaatcaatgttgtcgaagctg
aaacacgaatgtggagcagcgttcaccagcaaactggaggggatgttcaaggatatggag
ctttctaaagacatcatggtgcagttcaaacagtatatgcagtgccaaaacattcctggc
aacattgagctgacggtgaacatcctgacgatgggctactggccaacctacgtcccgatg
gaagtacacttgcctccggagatggtgcgactgcaggagatcttcaagaccttctacctg
ggcaaacacagcggcaggaagctgcagtggcaatcgacactcggccattgtgtcttaaaa
gctgagtttaaagagggcaagaaggagctgcaggtgtccctcttccaaacacttgtgctg
ctgatgtttaacgaaggagaggagttcaccctggaggagatcaaactggccacgggaata
gaggacagcgaactgcggcggactctgcagtcgctggcttgcgggaaagcgcgtgtcctc
accaagctccccaaaagcaaagacgtggaggacggggacaagttttcgtgcaacgatgac
ttcaaacacaagctcttcaggatcaagatcaaccagatccagatgaaagaaacggtggag
gagcaagccagtaccacagaacgggtgttccaggatcgccagtatcagatcgacgctgcc
atcgtgcggatcatgaagatgaggaagactctgagccataacctcttgatgtctgaagtg
tacaaccagctcaaattccccgtcaagcctgctgacttgaagaagaggatagagtctctt
attgaccgggactatatggagcgcgacaaggagaaccccaaccagtacaactacgtagct
tag
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