Pungitius pungitius (ninespine stickleback): 119210748
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Entry
119210748 CDS
T07626
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119210748 (rlim)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119210748 (rlim)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119210748 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Tropomyosin
Prok-RING_4
zf-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
119210748
NCBI-ProteinID:
XP_037316964
LinkDB
All DBs
Position
2:complement(33058876..33067715)
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AA seq
839 aa
AA seq
DB search
MEGSDSLEQSGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFSRLQQIKDGPDQHRTNAPNTESVEDPVEPPENSEDPANGDSLLDWLNTVRRTGNT
TRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAGEGEQESQEESPEGQEVV
PNGDPQGSVSEPETQVSGVEPQVPTAALQVPTADPQVPTAALQVPTAALQVPTAALQVPT
AALQVPTAALQVPTAEPQVSTAEPQVSTAEPQVSTAEPQVSTAEPQVSTAEPQVSTAEPQ
VSTAEPQVSTAEPQVSTAEPQVSTAEPQVSTAEPQVSTADPQVSTADPQVSIADPQLIIA
APQITIADPNRTMIDTQLSIADPAVPIVEPQVPMELEVVEEPMVEELGVILGPQAEIQEV
SQEVFGEPPWSPVTLTVQSPLSPLPRRGQRRARSRSPEPRRTRARTARSRSPLNLDQRNS
NNAHSAQGLDSPTHVPQVEGSSRTRQHVPSRQSAADGDVQQSRAGAETVPEPGNVASQEG
EAAVGEGGAAGRRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGG
FRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDS
DSDSSDSNRGAATPADLAEALNNPDAPPAAVADVDEPPAATGIRARTAESEIDEGLPTAP
PPSGGRARPRPPISLEEPSSLPFLRLAHFFLLNDDDEDQPQGLTKEQIDNLSMRNFGESD
ALQTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagtctagagcaaagtggcagtgaccagccagagtcacaacgcagg
aggcagctggaccgcctggacagggaggaggccttctaccagtttgtcaacaatctaagt
gatgaggactatcgtctcatgagggacaacaatcttttgggcaccccgggagaggtgacc
gaggatgagctgtttagtagacttcagcaaataaaggatggtccagatcagcaccgcacc
aatgctcccaacactgaaagtgtagaagatccagttgaaccgccagaaaactctgaggat
cctgccaatggggacagtctcttagactggctgaacacagtgaggcgcacaggcaacaca
accagaactggtcatcgtggaaaccagtcatggcgggccgtgagccagaccaatccaaac
agtggcgattttcgcttcagcctggaaatcagtgtgaatcgtaatctggctgaacagcag
gcagcgggggaaggggagcaggagtcccaagaagagtctccagagggtcaagaagtggtg
ccgaatggtgatccccaggggtctgtttcggaacccgaaacccaggtgtccggggtggaa
ccccaggttcccactgcggctctccaggttcccactgcggatccccaggttcccactgcg
gctctccaggttcccactgcggctctccaggttcccactgcggctctccaggttcccact
gcggctctccaggttcccactgcggctctccaggttcccactgcggaaccccaggtgtcc
actgcggaaccccaggtgtccactgcggaaccccaggtgtccactgcggaaccccaggtg
tctactgcggaaccccaggtgtccactgcggaaccccaggtgtccactgcggaaccccag
gtgtctactgcggaaccccaggtgtccactgcggaaccccaggtgtccactgcggaaccc
caggtgtctactgcggaaccccaggtgtccactgcggaaccccaggtgtccactgcggat
ccccaggtgtccactgcggatccccaggtgtccattgcggatccccaactgattattgct
gcaccccagataaccattgccgatcccaataggaccatgatcgacacacagttgtccatt
gctgatcccgcggtccccattgtagaaccacaggtgcccatggagttagaagtagtggaa
gaacccatggttgaggaattgggtgtcattttaggaccacaggctgaaatacaagaggtt
tcacaagaggtttttggagaaccaccctggtcacctgtcaccctaacggtacagtcaccg
ctttcccctttaccccgcagaggacaaaggagagcccgcagccgcagtccagaacctcgc
aggactagggcgcgtacagccaggagccgctcccctctcaatctggatcaacgtaattca
aataacgctcacagtgcccaaggcctcgactctcccacacatgtgcctcaagtggaggga
agttctcggactcgacaacatgttccttctcggcaaagcgctgctgacggtgatgttcag
caatctcgtgcgggtgcagaaacggtcccagagcccggtaatgtggcatctcaggaagga
gaagctgctgtgggtgaagggggcgcagcagggcgccgcccccctactatcatgctcgat
ctccaggtgcggcgcgtgcgtccaggcgaatatcgccagcgggacagcattgccagccga
acccgctcgcgctcccagaactcgaacaacacattcctttatgagagtgaacgtggtgga
tttcgtaggactttctcgcgctccgagcgtgctggtgtgaggacctacgtcagcactatt
cgcatccccatccgaagaatctctgatgcaggtttgggagaggcgacctcaatggctctc
caatctatgattaggcagataatgactggttttggtgaacttggctacctcatggattcc
gactctgactcttcagattcaaaccgtggggccgccacacctgctgatctggctgaagcc
ctcaacaacccagatgctcctcccgccgctgttgctgatgttgatgagccaccggcggct
acgggaatcagagcaaggacagctgaatctgaaattgatgagggccttccaaccgctcca
cccccctctgggggcagggctcggcctagaccccccatcagcctggaggagccgagctca
ttgcccttcctccgtcttgcccacttcttcctcctaaatgatgacgacgaggaccagccc
caagggctaaccaaagagcagattgacaacctctcaatgcgcaactttggtgagagcgat
gccttgcagacttgcagcgtgtgcataacggaatatgcggaaggcaacaagctacgaaag
ctgccctgctctcacgagtatcacgtgcactgcatcgatcgctggctctccgaaaactcc
acttgccccatctgccgcagggcggtcctggtatctgccaacagagagagtgtggtgtag
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