Pungitius pungitius (ninespine stickleback): 119210777
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Entry
119210777 CDS
T07626
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04080
Neuroactive ligand-receptor interaction
ppug04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119210777 (gabra4)
04082 Neuroactive ligand signaling
119210777 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119210777 (gabra4)
Ion channels [BR:
ppug04040
]
Ligand-gated channels
GABA-A
119210777 (gabra4)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
119210777
NCBI-ProteinID:
XP_037317023
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All DBs
Position
2:28959448..28975929
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AA seq
556 aa
AA seq
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MGSAKKKEKATVMVPVFIRILLYFFFLATCVKKISGQTKKDERIYPENFTRILDRLLDGY
DNRLRPGFGGRVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQQWVDRRLMYEGPIEILRL
NNLMVTKVWTPDTFFRNGKRSVAHNMTAPNKLFRIMKNGTILYTMRLTISAECPMKLVNF
PMDEHACPLKFGSYAYPKTEMIYKWTKEPQQSVEVPPESSSLVQYDLIGQTVSSEMIKSI
TGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQMERAKRKPARCP
PVPQTTPVKVKDTEEVLQNPDSNGNLRKRMKYISHLEASSHLRAMSTANISGLGRARALQ
SLAGGVNGSSSSTLSRSSPKSESLLSVASSSAQLVKAAPQAAASTPDVMAATPCKQNASS
SSLQHLLGPKLERIQMMGNKLEPKQTPCSQPSAAGMGGTSKIDKYARILFPVSFGAFNMV
YWVVYLSRETMLAKGG
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgggttccgccaagaagaaggagaaggcgacagtgatggttcccgtttttattcggatc
ctcctctactttttctttttggctacttgtgtaaagaaaatctctggacagacaaagaag
gatgaaaggatctatccggagaattttacgcgcattttggaccgacttctggacggatat
gacaacaggctacgaccaggattcgggggacgggtgactgaggtcaagacagacatctat
gtgaccagttttgggcctgtctcggatgtggaaatggagtacacaatggacgtgttcttt
cggcagcaatgggtggaccggaggctgatgtacgagggacccatagagattctgaggctg
aacaacctgatggtcaccaaagtgtggacgccggacaccttcttcaggaacgggaagaga
tctgtggctcacaacatgacagcccccaacaagcttttccgcatcatgaagaatggcacc
atcctgtacaccatgaggttaaccatcagtgccgagtgtcccatgaagcttgtgaacttc
cccatggatgaacatgcgtgccccctcaagtttggaagctatgcctatcctaagacggag
atgatctacaagtggaccaaagagcctcagcagtcagtggaggtccctcctgagtcctcc
agcctcgttcagtatgatctcatcggacagacggtctccagcgaaatgattaaatccatc
acgggtgaatatgtggtgatgacggtctactttcacttgaaacgtaaaatgggctacttc
atgattcagacgtatatcccctgcataatgacagtaatcctctcccaagtgtccttctgg
ataaacaaagaatcggtcccggcacgcacagtctttggcatcaccactgtcctgaccatg
acgacactcagcatcagcgcccgccactccctccccaaggtctcctacgccaccgccatg
gactggttcatcgccgtctgcttcgccttcgtcttctccgccctcattgagtttgccgcc
gtgaactacttcaccaacgcgcagatggagcgcgccaagaggaagccggccagatgtccc
ccggtgccccaaaccacgcctgtcaaggtcaaggacacggaagaagtgctgcagaatccc
gacagcaacggtaacctgagaaagcggatgaagtacatctcccacctagaggccagcagt
cacctgagagccatgtccaccgccaacatttcgggcctcggccgagcaagggcgctgcaa
agtttggccggcggggtcaacggcagctcctcctccaccctctcgcgctcaagccctaag
tccgagagcctgcttagcgtggcttcgtcctccgcccagctggtgaaggccgcgccccag
gccgcggcatccacgccggacgtgatggcggccacgccgtgcaagcagaacgccagctcc
tcgtccctgcagcatctgctggggcccaagctggagcgcatccagatgatgggcaacaag
ctggagccgaagcagacgccgtgctcccagccaagcgccgccggcatgggtggaaccagc
aaaattgacaagtacgcacggatcttgttcccagtgtcattcggtgcgtttaacatggtc
tactgggtggtttacctgtcgagggaaaccatgctggctaaagggggctag
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