Pungitius pungitius (ninespine stickleback): 119210809
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Entry
119210809 CDS
T07626
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04510
Focal adhesion
ppug04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119210809 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119210809 (lamb1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Lipase_GDSL
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
119210809
NCBI-ProteinID:
XP_037317086
LinkDB
All DBs
Position
2:2132415..2146077
Genome browser
AA seq
1787 aa
AA seq
DB search
MLLLEMSPAVLFITTLALWCSVRAQQLPEFPDVCTEGSCYPATGDLLIGRAHKLSVSSTC
GAHRPERFCIVGHLQEEKKCFVCDSRLVFDEDSNQGSHAIDQLVTTFAHNRLKTWWQSEN
GVENVTIQLDLEAEFHFTHLIMTFKTFRPAAMVIERSMDFGTTWQVFRYFAYDCEASFPG
VPSGPMVKVDEIVCDSRYSDIEPSTEGEVIFRVLDPVFEIEDPYSLKIQNMLKITNLRVK
FLKLHTLGDNLLDHREEVTEKYYYALYDMVVRGNCFCYGHASECAPMDGTAPGIEGMVHG
RCVCNHNTEGLNCERCQDFYHELPWRPAEGRNSHACKRCECNQHATSCHFDPAVYATTGN
TSGGVCDDCRHNTAGRQCEQCAPFYYKHPGRDLRHPNVCQPCSCDPAGSLQGGLCDPRTD
VAAGLISGQCRCKANVEGARCDHCRQGHHGLGAGPHGCLPCTCNPLGTLPGGNPCDADSG
SCFCKRLVGGRDCGECLPKHWGLSNDMDGCRPCDCDQGGAVSNDCDPRSGQCVCREHMSG
RRCDRVESGFYFITLDHYTYEAEDAQHGPGVTLVPRPRPLDRSPTWTGPGFANVPEGAYL
DFTVDNVPESMDYDVLIRYEPQLPEQWEEVSVRVRRPASTPPKHSAQCGDPAVQGGDDQS
VSLPPGSRHVSLGRPVCFERGQNYTIRLTLPPYPSASDVQNPYTLIDSLVLIPRVRELDM
FHGLDGAGAWDTFQRYRCLESSQSVVKSPPTDICNDYIFSISALLHRGAMECRCDPQGSL
SAVCEPSGGQCRCRPDVVGKNCDRCAPATFLFSPAGCRPCGCDPLGSVGAVCHEATGQCE
CVPGATGRQCSHCLPGFWGFPQCRPCQCNGHSEFCHPQSGECQGCRDFTTGPRCARCLDG
YHGDPQLGSGGRCRPCMCPDGPSSGRQFSDSCYLMAATNQLVCVCSSGYKGPRCDECAPG
YFGNPLVPGGRCLPCQCNGNIDLHDPGSCDAGTGSCLRCLHHTEGHGCQQCRHGYYGNAA
TQTCWKCMCDPAGTAPQACSSPGECQCDRRSGQCPCLPNVVGQNCDACGAGAWGLGGGGG
CRRCDCDPAHSFGSSCDEVTGQCSCRPGFGGRTCRECRELFWGDPEVRCHACDCDPRGTS
SDQCHRATGECTCVGGVSGPRCDKCARGHRGEFPACQPCHRCFGVWDAVVGELTNQTRRL
EAQVTQLRTSGVTAPYKDLVSSLEANAKAVREIVERNPAAAKLEQIQELMHQITGVMSHL
SGELNTTEEAAGLLRGDANATDASLGALTDEAEQLRRRVQELRQLVSNAKNANIQGATDT
IAEAHARSLAAELSANASTGSTGSRVAASAARRRAAEDELGAAQKEFDRRHQRNAGGLHE
LEAQLETLDLSPLSEATCGGAAEGDGCSGSPCGGLGCVGEGGAPRCGGEGCGGLVAAAQT
ALKSAGDLDLKILAASQQVDELSRLVWEANNRANVAKGGALEVLVKSNRSRERVEQSNQQ
LRSLIREIRDLLSDEKANVSVIEAVANEVLALEMPTSAQKLQELTEEIREKVENLTSVEA
VLSQSAEDIRAAEALLRRAESAGMEASRMKEAVDEAKAAVDQTERAQSVATDAIQLAQNN
TKGTLALLISVETETAAAELKLGNATGRLVQLEREVGLLRQSDLEVNRLAETANRTTDRA
RLDADEAQKEFDSKVKKSLVKAEDLVEDKGEPTLQARRRVDELQKEAQELLAQGSIKLQR
LQDLESAYEANQLVLEAKAGELGELERMARAVLEEISHKVTLYSTCA
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgctcctgctggaaatgtctcccgcggtcctctttataacgaccttggccctgtggtgc
tccgtcagggcgcagcagctgcccgagttcccggatgtctgcacggaggggagctgctat
ccggccacaggtgacctgctgatcggccgcgcgcacaagctctccgtctcctccacctgc
ggcgcgcaccgtccggagcgcttctgtatcgtcgggcatctgcaggaggagaagaaatgc
tttgtgtgcgactcgcggctcgtgttcgacgaggacagcaaccaaggcagccacgccatc
gaccaactggtcaccaccttcgcccacaaccggctgaagacctggtggcagtcggagaac
ggtgtggagaacgtgacgatccagctggacctggaggccgagtttcacttcacgcacctt
atcatgaccttcaagacgttccggccggccgccatggtgatcgagcgctccatggacttc
gggacgacgtggcaggtcttccggtacttcgcctacgactgcgaggcgtccttccccggc
gtgccctccggcccgatggtcaaggtcgacgagatcgtctgcgactcgcgttactccgac
atcgagccgtccacggagggagaggtgatatttcgggtgctggaccccgtctttgagatt
gaagacccctacagcctgaagatacagaacatgctgaagatcactaacctccgcgtgaag
ttcctgaagctccacacgttgggcgacaacctgctggaccaccgcgaggaggtgacggag
aagtactactacgccctctacgacatggtcgtccgcggcaactgcttctgctacggccac
gcctccgagtgcgccccgatggacggaacggcgcccgggatcgagggcatggtccatggc
cgctgtgtgtgtaatcacaacaccgagggactaaactgcgagcgctgtcaggacttttac
cacgagttgccgtggagaccagcggagggccgaaacagccacgcctgcaagaggtgcgag
tgtaaccagcacgccacgtcgtgccacttcgacccggccgtgtacgcgaccacgggcaac
accagcggcggcgtgtgcgacgactgccgccacaacacggcggggcgccagtgcgagcag
tgcgcgcccttctactacaagcacccgggccgcgacctcaggcaccccaacgtctgccag
ccgtgcagctgcgacccggccgggtccctgcagggcggactgtgcgacccgcgcaccgac
gtggccgccgggctgatctcgggtcagtgccggtgcaaagccaacgtggagggggcccgc
tgcgaccactgcaggcagggacaccacggcctgggggcggggcctcacggctgcctgcct
tgtacctgtaacccgctgggcacgctgcccggggggaacccctgcgacgcggactccgga
agctgcttctgcaaacggctcgtgggcggacgcgactgcggcgagtgtctgccgaagcac
tggggtctgtccaacgacatggacggctgcaggccgtgtgactgcgaccagggcggcgcc
gtcagcaacgactgcgacccccgctcgggtcagtgcgtgtgcagggagcacatgtccggg
aggcgctgcgatcgggtcgagtccggcttctacttcatcaccctggaccactacacctac
gaggccgaggacgcccagcacggccccggcgtgacgctggtgccgaggccccgccccctg
gatcgcagccccacgtggaccggcccgggcttcgctaacgtcccggaaggagcctacctg
gatttcaccgtggacaacgtccccgagtccatggactacgacgtcctgattcgctacgag
ccgcagctgcccgagcagtgggaggaggtgagcgtccgggtgcggcgccccgcctccacc
cccccgaaacactccgcccagtgcggcgaccccgcggtccaggggggagacgaccagtcc
gtctccctcccgcccggatccaggcacgtgtcgctggggaggccggtgtgcttcgagcga
ggacagaactataccatccgcctcactctgccgccctacccgtcggccagcgacgtccag
aacccgtacacgctcatcgactcgttggtgctgattccccgggtccgggagctggacatg
ttccacgggctggacggcgccggagcgtgggacacgttccagcgctaccgctgtctggag
agcagccagagcgtcgtcaagagcccgccgaccgacatctgcaacgactacatcttcagc
atctccgccctgctgcaccgaggagccatggagtgccggtgtgaccctcagggttcgctc
agcgccgtgtgcgagcccagcggcggtcagtgccggtgccgacccgacgtcgtgggcaag
aactgcgaccgctgtgcccccgccacgttcctcttcagccccgccggctgcagaccctgc
ggctgtgaccccctgggctccgtcggcgccgtctgccacgaggcgacgggccagtgcgag
tgcgtgccgggggccacggggcgccagtgttcccactgcctgccgggcttctggggcttc
ccccagtgccggccgtgccagtgcaacggccacagcgagttctgccacccgcagagcggc
gagtgccagggctgcagagacttcaccaccggaccccgctgcgccaggtgtctggacggt
taccacggcgacccacagctgggctcgggcggccgctgccggccctgcatgtgccccgac
ggcccgagcagcgggcgccagttctcggacagctgttacctcatggctgccaccaaccag
ctggtgtgtgtgtgcagctccggctacaaaggtcccaggtgcgatgagtgcgcccccggt
tatttcgggaaccccctggtgcccggcgggcgctgcctgccctgccagtgcaacggcaac
atcgacctgcacgacccggggtcctgtgacgccgggacgggctcctgtctcaggtgcctc
catcacaccgagggccacggctgtcagcagtgcagacacggttactacggtaacgcggcc
acccagacctgctggaagtgcatgtgcgacccggcgggcacggccccccaggcctgctcc
tcgcccggcgagtgccagtgcgaccggcgcagcgggcagtgcccctgcctgcctaacgtg
gtcggccagaactgcgacgcctgcggcgccggcgcgtggggcctgggcggcggggggggc
tgccggcgctgcgactgcgaccccgcccactccttcggctcctcctgcgacgaggtcacg
ggtcagtgctcgtgccgacccggcttcggtgggaggacgtgtcgggagtgcagggagctc
ttctggggggatccagaggtcagatgtcacgcttgcgactgcgaccctcggggcacctcc
agcgaccagtgccaccgggccaccggcgagtgcacctgcgtggggggcgtgtccggcccg
cgctgcgacaagtgcgcccgcggccaccggggcgagttccccgcctgccaaccctgccac
cggtgcttcggcgtctgggacgcggtggtcggcgagctgaccaatcaaacgcgccgccta
gaggcccaggtgacgcagttgcggaccagcggcgtgacggcgccgtacaaagacttggtg
agcagcctggaggcgaacgccaaggccgtgagggagatagtggagagaaacccggcggcg
gccaagctggagcagatccaggagctgatgcatcagatcaccggcgtgatgtcccacctg
agcggagagctgaacaccacggaggaggcggcgggcctcctgcgcggagacgccaacgcc
accgacgccagcctgggcgcgctgacggacgaggccgagcagctgcggcgaagagtccag
gagctgaggcagctggtgtccaacgccaagaacgccaacatccagggcgccacggacacc
atcgcggaggcacatgcgcgctccttggcggccgagctcagcgccaacgcctccaccggc
agcaccggcagccgggtggcggcatcggccgcgcggcggagagccgccgaggacgagctg
ggcgccgctcagaaagagttcgaccgccggcaccagaggaacgcgggggggctgcacgag
ctggaggcccagctggagacactcgacctgtccccgctgagcgaggcgacgtgtggcggt
gcagctgagggcgacggatgctccggctccccctgcggcggtttgggctgcgtcggcgag
ggcggagcgccccggtgcggcggcgagggatgcggaggcctcgtagccgccgcccaaacc
gcgctgaagtcggccggcgacctggacctgaagatcctcgcggcgagccagcaggtggac
gagctgtcgcggctggtgtgggaggccaacaaccgcgccaacgtggccaagggcggcgcc
ctggaggtgctggttaaatccaaccgcagcagagagcgagtggagcagagcaaccagcag
ctgaggagcctcatcagagagatacgggacctgctcagcgacgagaaggcgaatgtttcg
gtgatcgaggcggtggccaacgaggtgctggctctggagatgccgacgtccgcccagaag
ctgcaggagctgacggaggagatcagggagaaggtggagaatctgaccagcgtggaggcg
gttctcagccagagcgccgaggacatccgggccgccgaggcgctgctgaggcgagccgag
tcggccggcatggaggcgtcacgcatgaaggaggcggtggatgaggcgaaggccgccgtg
gaccagactgagcgcgctcagagcgtcgccacggacgccatccaactggcccagaacaac
accaagggaaccctggcgctgctgatctctgtggagacggagacggcggcggcggagctg
aagctcggcaacgcgacgggccgactggtgcagctggagagggaggtgggcctgctacgc
cagagcgacctggaggtcaaccgcctggcggagacggccaaccggaccaccgaccgggcc
cggctggacgcagacgaggcccagaaggagtttgactcgaaggtgaagaagagccttgtg
aaggccgaggacctggtggaggacaaaggggagcccacgctgcaagcgaggaggcgagtg
gacgaactgcagaaggaggcccaagagctgctggctcagggcagcatcaagctgcagagg
ctgcaagacctggaaagcgcctacgaggccaaccagctcgtcctggaggccaaagctggc
gagctgggggagctggagcgaatggcccgcgcggtgctggaggagatcagccacaaagtg
acgctgtacagcacgtgtgcgtga
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