Pungitius pungitius (ninespine stickleback): 119210875
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Entry
119210875 CDS
T07626
Name
(RefSeq) protein Smaug homolog 2 isoform X2
KO
K27396
protein Smaug
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119210875
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119210875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
119210875
NCBI-ProteinID:
XP_037317274
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All DBs
Position
3:complement(11719688..11732181)
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AA seq
681 aa
AA seq
DB search
MMFRDQVGILTDWFKGWNECEQTVALLSLLKRVSRTQARFLHICLEHWLADCTEIHILEA
EANNAAIVSQWHQEPKEKVVSLLLSHLPLLQPRNSEAKCEYMKLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTSLAMWLNHLEEHLSSGYAPRPPSSPYHPRQGSDEWPSSA
EALDPGHGWHDQSPSSGMSPAGQNGHMPFPGGMSSPINSNNTGLCGQMQPSPLKKSMSVI
PPGSQACLSEWVSQDDIGGRQSFILTDHAPLSPQSSVASSGSEQTEEQGSSRNTFQEDGS
GMKDVPAWLKSLRLHKYASLFSQMTYEEMMILTEHHLESQNVTKGARHKIALSIQKLRER
QSVLKSLEKDILEGGNLRNALQELQQIIMTPIKAQSLPNAAQIPPDAAISPSDVTKSAAD
KEPTSEGFQSHNPPTCDGDSTATPISDGDIAGQFTRVMGKVCTQLLVSRPDEENISCYLQ
LIEKCLTHEAFTETQKKRLVSWKQQVLKLLRLFPRKAMLDMPVYRQKGWTYGSNSLPTAG
SVSGVVGRRGQRQFQMTPRGLPAGRIGLLSPGGIGGASPRHTLTNPALAGQGRQNLWFAN
PGGSNSMPSQSRSSVQRTHSLPVHTSPQTMLMFQQQECQVPGADLEINPTLESLCLSMTE
HALGETDKVTHVDGTDRTSTI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggtgggtatcctcacagattggttcaagggctggaatgagtgt
gaacagacggtggcactgttgtccctcctgaagagggtgtcccgcacccaggctcgcttc
ttacacatctgccttgaacactggctggcagactgcacagagatccacatcctagaagct
gaggccaacaatgcagcaatcgtcagccagtggcatcaggagccaaaagagaaagttgtg
tccttgctgctgtcccacctgcctctgctgcagccccgcaacagtgaggccaaatgtgag
tacatgaagctgctgcagaaggtgttgagtcacaccatcgagagtagcctgtttgtggaa
gaaagtaggcagctgctgtcctacgcgctcatccacccggccacaacactggatgaccgc
acctctctggccatgtggctgaaccacctggaggagcacctctccagtggctacgcgccc
cgacccccttcgagcccttaccacccgcgccagggctcagacgagtggcccagctctgct
gaggcgctggaccctggccacggctggcacgaccagtccccgtcatccggcatgtctcca
gcaggccagaacgggcacatgcctttcccgggtgggatgtcctctcccatcaacagcaat
aacacaggtctttgcggacagatgcagcccagtcctctgaagaagtccatgtccgttatt
cctcccggttcccaggcttgcctctccgagtgggttagccaggatgacatagggggccgg
cagagcttcattctaacagaccacgcgcccctttcaccccagagcagcgtagcctcctcg
ggcagcgagcagaccgaagaacaaggctccagtcgcaacaccttccaagaggatggcagt
ggcatgaaagatgtccccgcctggttgaagagtctccgccttcataaatacgcgtccctg
ttttcccagatgacctatgaggagatgatgattctcaccgagcaccacctggagtcgcag
aacgtcacaaaaggagcgcggcataagatcgccttaagtatccagaaactgcgagagagg
caaagtgttctcaagtctttagaaaaggatatcttggaagggggcaacctacgtaacgcc
ctgcaagagctccaacagatcatcatgacacctattaaggcccaaagccttcccaacgca
gcacaaattcccccggacgcagccatctccccgtcagacgtcacaaaaagcgcagcagac
aaagagccgacctcagagggcttccagtcccacaacccgcctacctgcgatggagactcc
acggccacacccatctcagacggcgacattgctggacagttcacccgtgtcatgggtaaa
gtgtgcacccagttgctggtgtcaagaccagatgaggagaatatcagctgttaccttcag
ctgattgagaagtgtctcacacatgaggccttcacagaaactcagaagaaaaggctggtc
tcctggaagcagcaggttctcaaactgctccgcctgttccctcggaaagctatgctggac
atgcctgtgtaccgacagaaaggctggacctatgggtccaactccctccccacagcaggc
tctgtgagtggagttgtaggacggcgggggcaaaggcagttccaaatgactcctcgcgga
ctccccgccggacgaattggcctcctgagtcccggtgggattgggggagcatctcctcgc
cacacactcactaatcctgcgctggcaggccagggaagacagaacctgtggtttgccaac
cccgggggcagcaacagcatgccaagtcagagtcgcagctccgtgcagcggacccactcg
ctccccgttcacacttccccgcaaaccatgctcatgttccagcagcaagaatgccaagtt
ccgggcgctgacctggagatcaaccccacgctggagtcactgtgcctcagtatgacggag
catgccttaggggagaccgataaggttactcacgtagatggaacagaccgaacatcaaca
atatga
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