Pungitius pungitius (ninespine stickleback): 119210914
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Entry
119210914 CDS
T07626
Symbol
frmpd1b
Name
(RefSeq) FERM and PDZ domain-containing protein 1 isoform X1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119210914 (frmpd1b)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Other domain-containing proteins
FERM domain-containing proteins
119210914 (frmpd1b)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FERM_M
RA_2
PDZ_6
FERM_C_FAK1
PDZ
DUF6288
FERM_f0
Motif
Other DBs
NCBI-GeneID:
119210914
NCBI-ProteinID:
XP_037317327
LinkDB
All DBs
Position
2:complement(23712640..23734443)
Genome browser
AA seq
1711 aa
AA seq
DB search
MEEKERCRSRSPARRTSRVQQVVGTIIRRTRESLSRERLLGDGRSQRSNSLSNQNFQAKL
TLQITRDPVLDSSTGHGFILTPTAPLLVRDIAAGSPADGILYPGDLVLQINDTVLEDLSI
DQVDNLLRDLQDCITVTILRHMTNPKSSIMSAEKRARLRSNPVKVRFAEEVVVNGHTQGN
SLLFLPNVLKVYLENGQTKAFKFDNSTTVKDIVLTLKNKLSIRAIEYFALVLEQQYSITK
LLLLHEDEFIQKVVQKKDSHDYRCLFRVCFVPRDPMDLLQDDPSTFEYLFLQSVGDVLLE
RFAVEMKCNTALRLAALHMHERVDSSGQTRASIKSITREFGMDSFISPTLLSNMREKDLR
KAISYHLKKIQSLLEPRQKVISSSQARVAYLTQLGELISYGGRSYTATMMLQDREVLVSL
LVGAKYGMSQIINHKLNMISTLVEFSSISRVELLSESEKVSVLRISLHDMKPFALLMDSL
AAKDLGCLLGGYCKLLVDPSVNVFRLGRPKVRVHRIPAEEGVCGRFAAIEGVCYESLSSY
VSRCCSDSDDSTDEDDPMDHQNYKRPDPASQDWEERRREEEEKRREEERKEKEEHKGKQE
VKIVVTTEGSENEGEEEEGATGSGLLKCSVMDEEMNQESSWYHTDPRVTNSFSSLSSGSL
SAALEESSAAAKATSRLDALRGPCTSEDLPGLDVHHPYLLEPKRHQGPVRPTNLNYRGND
NSCLCFADLSKADFLPSPPEATSDDEDDEEEEPEMGGLRRISKIPSSRDLRMIDTIPFQR
SPIKRKKKVPPKVPVRTSSIPMDKAGQVEQRLSMDEDGLFLTPSPNPKPSLLVKETASES
EDEFFDAQDRFTPPVPDLSDAELADRRNANRLSGGWNGPSAVPGKEPPSPLANKAKSSKI
RREVETLKDQTNQLINQQASLSEPSQKPKVKVKPLLAPKPQLPPKPKIIPPKSPQHGRSY
VHCNGDATGRLSSELLEMEPETMEFKSVTSGAGGLPVSSPLIRAVRCSKQPTPTTSPLAE
EKTKEHENSATKTKDLRHENGVGVVSNDKAWPCERETPRVEGKTNGTALPGRKPPNPLPI
PRTNSGTKLAIPPPVSPKPTSPTTFHPLSLPASSPVTPTDPSKGIFKDSVSKPNGVHPWS
SRNGSVQSGSRRVSLSHENLSPKNADAALTLTTSLTSTNSKGVGGLESREPGRSGSGSDL
RTSSSSLGGRLPASALRGKIQALPWYMTRSQEILGTLDYPSTSSINGDTSGFGSGLSVAS
GLSDFNKTPVKEKETVTSGGRENILEDGAEVVIATIKEAQEVTSHMKRNNGTNGSHSNLT
FKENCAHSVSSEQPQSRPHSAVGLGGVSSMQIEGDSPSSDSTPPQQHREACGCRTVYANC
FSGDTEDGISFDEELTIYEFSRRTRPKPAPASSPTTPSPKPNILSLLRDNPRPLSTFSTA
SSELSPVVSRPVSPTNSFGGPLRTLSNKNYGALKGGFASLRQDIDQLLLVLQRGSLEQTQ
PESCQDSKQDITGIKAGPDLNHNGTEGNSTPASEPICTGTSAVTMTEGERSLLQAEARRL
ATGCQRATRVGWAPDEALRSLSNSFSALVQLSAACLRTNPCPGCEICHNASVVHVDEEDD
DSQEAMDKLKEIVGLYREFVGAVETAGTSAGVVVKSVGLTGSGQGQGESEGVRLLAKRCT
VLISSVFALTQLFRTRTPDTADTPGHVPLHF
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaggagcgatgtaggagcaggtctccggcccggagaaccagccgggtgcag
caggtggtgggaaccataatacgacgtacccgagagtcgcttagcagagagcggttgcta
ggcgatgggaggtcacagcgctccaacagtctgtccaatcagaactttcaggccaagctg
acgctgcagatcaccagggacccggtcctggacagcagcactggacatggcttcatcctc
accccaactgcacccctgctggtcagggacattgccgcagggagtcctgcagatgggata
ctatacccaggggacctggtgttgcaaataaatgataccgtgctggaggacttgagcatt
gaccaggtggataacctcttaagggacttgcaggattgtatcactgtgactatcttgcgg
cacatgacaaatcccaagtcatccatcatgtcagcggagaagagagctcgtttgaggagt
aatccagttaaagtgcgctttgcagaggaggtggtggtcaacgggcacactcagggaaac
tctcttctcttcctgcccaatgtcctgaaagtgtatttggaaaacggacagacaaaggcc
ttcaagtttgacaacagcaccaccgtaaaggacattgtgctgactctgaagaataaactg
tccatccgggccattgagtactttgccctggtgctagagcaacaatacagcatcaccaaa
ctgctgctgctgcacgaagacgagttcatacagaaggttgtgcaaaaaaaagactcccat
gactacagatgtttgttcagggtgtgtttcgttccgagagacccaatggacctgctgcag
gatgacccctctaccttcgagtacctctttttacagagtgttggggacgttctgctggag
cgctttgcagttgagatgaagtgcaacactgcgctccgactggccgcgctgcacatgcat
gagagggtagacagtagtggacagaccagggcctctatcaagagcattacgagggagttt
ggcatggacagcttcatctctcccacactgctgagcaacatgagggagaaagacctgagg
aaagccatcagctaccacctcaaaaagatccagtccctgctagagccacgccagaaggtc
atttcttcaagtcaggctcgagtggcctacctcactcaactgggagaacttatctcatat
gggggacgttcctatacagctacgatgatgcttcaggatagggaggtgttggtcagcctg
ctggtaggagctaaatatgggatgagtcagatcatcaaccacaagctcaatatgatctca
acactggttgagttcagcagcatcagccgagtggagctgctctctgagtcggaaaaagtc
agcgtactgcgcatctcactgcacgacatgaagccatttgccttactgatggactctctg
gcagccaaagacttagggtgtctgctgggaggctactgcaaactccttgtggatccgagt
gtcaatgtcttccgtctggggcgcccaaaagtgagggtgcaccggattcctgctgaagaa
ggtgtgtgtggaaggttcgccgcaatagagggcgtgtgctatgaatccctatcaagttat
gtgtcacgttgctgtagtgactcggatgactcaacagatgaggatgaccctatggatcat
cagaattacaaacgtccagacccagcaagccaggactgggaagaaaggaggagagaggag
gaagagaaaaggagagaggaggagaggaaagagaaagaagagcacaaaggcaaacaggaa
gtgaagatagtagtgacaacagaaggttcagaaaatgagggtgaagaggaagaaggagca
acaggaagtggtctacttaaatgtagtgttatggatgaagagatgaaccaggagagcagc
tggtaccacacggacccacgggtcaccaacagcttctccagtttgtccagtggctccctg
agtgctgccctggaagagagcagtgcggcagccaaagccacatctcgtttggatgcgctc
cgtggaccgtgcacaagcgaagatctaccgggcttggatgttcaccacccctacctccta
gagcccaaacgccatcaggggcctgtgcggcccaccaacctcaattaccgtggcaatgac
aactcttgcctttgcttcgctgacctttccaaggctgatttcctccccagccctcccgag
gctaccagtgacgatgaagatgatgaggaagaagagcctgaaatgggtggacttagacgt
atttctaagatacccagttcaagagatttgagaatgattgacaccataccctttcaaaga
tcccccattaaaagaaagaaaaaggtccctcccaaagtcccagtgaggactagttcaatt
cctatggacaaagcaggacaagttgagcagcgcctctccatggatgaagatggtctattt
ctgacaccttcacccaatcccaaaccatctcttttggtcaaagaaactgcctcagaatcg
gaagatgagttttttgatgcacaggacagatttactcctccagttcctgatctatcagac
gctgagctggctgaccggcggaatgctaatcgcttaagtggaggctggaatggtccttca
gccgtcccggggaaagagccaccctccccccttgccaataaagccaaatcttcaaaaatc
agaagagaagtggagacgcttaaagaccaaacaaatcaacttatcaaccaacaagccagt
ttatcagagccatctcagaaacctaaagtcaaggtcaaaccccttttggcccctaagccc
caactgcctcccaaacctaagatcattcctcccaaatccccccagcatggaagatcatat
gtccactgcaatggggatgccactggacgtctttcctctgaacttctggaaatggagcca
gaaaccatggagttcaagtccgtcacatctggggcaggtggactgcctgtctcatcacct
ctgatcagggcagtgcggtgcagcaagcaaccgacacccaccacaagcccactagctgag
gaaaagacaaaggagcacgaaaacagcgcaacaaaaactaaagatctgaggcatgagaac
ggagtaggtgttgtttccaatgacaaggcatggccttgtgaaagggaaactcctagagtt
gagggaaaaaccaatgggactgctctacccggaagaaagccaccaaacccactccctatc
cctcgcactaattcaggtacaaagttagccatcccccctccagtatcacccaaacccact
tctcccaccacattccaccccctgtcattacccgccagctctcctgtcaccccaactgat
ccaagcaaagggatcttcaaggacagcgtcagcaagccaaatggagtccacccttggagc
agccgaaacggctcagtccagtccggatccaggagggtctccctcagtcatgaaaatctg
tcgcccaaaaatgcagacgctgctctcacccttaccacctccctcacttccaccaactcc
aaaggtgtaggaggccttgaaagcagagagcctgggagatctggatcaggatcagacctg
aggaccagctcctccagcctgggaggtagactgccggcttctgccctgagagggaagatc
caggctttgccatggtacatgacccgctcccaggagattttgggaaccctggactatccc
tccactagctccatcaatggcgacacatctggatttggctctggcttgtctgtagccagc
ggtctctcagacttcaacaaaacgcctgttaaggaaaaagagactgtgacctccggaggg
agagagaacattttagaggatggagcagaggttgtcatagccaccatcaaagaagcccag
gaagtgacctcacacatgaaaaggaacaatgggacaaatggctcccactctaatctgact
tttaaagagaattgtgcacacagtgtttcatcggagcagccgcagtcgcggcctcattca
gcagtggggttgggaggcgtgtccagcatgcagatcgaaggtgactctccgagctcagac
tctactccgccacaacagcatcgggaggcttgtggctgccgcaccgtttatgccaactgt
ttcagtggagacaccgaggatggcataagctttgacgaagagctcaccatttatgagttc
tcccgccgcacgcgccctaaacctgcacctgcctcgtcccctacaacgccgtctccaaag
cccaatattctgtcactgctgcgggacaacccccgtcccctctctactttctccactgca
tcctctgaactcagtcctgtagtttcacgtccagtttcccccacaaactcctttggtggt
cctcttcgtacacttagcaacaagaattacggtgcgcttaagggaggctttgcctcccta
cgtcaagatatagaccaacttttgttggtattacaaagggggtctcttgagcaaactcaa
ccagaatcatgtcaagactcgaagcaggatatcacaggtataaaagcggggcctgaccta
aatcacaatggaactgagggcaattctaccccagcatcggagccaatttgtactggaaca
agcgcggtcaccatgacagagggcgaaagaagtcttctccaggcagaggctcgacgattg
gcgaccgggtgtcagcgggccacgcgtgtaggctgggctcccgacgaagcgctgcgctct
ttgtccaacagcttcagcgccctggttcagttgtctgctgcctgcctgcgaacaaaccca
tgccctggttgtgaaatctgccataatgcgagcgtggtccacgtggacgaggaggatgac
gacagccaggaggccatggacaagctgaaggagatagtgggtctgtaccgagagtttgtc
ggggctgttgagacagctggaactagtgccggggttgtggtgaaaagtgtgggcctcact
gggtctggacagggtcagggggagagtgaaggggtcaggcttctggccaaacgctgcact
gtgctcatctcgtccgttttcgcactcacacagctctttcggacacgcacaccagacacc
gccgacacgcccggccacgtacccctccacttttga
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