Pungitius pungitius (ninespine stickleback): 119210934
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Entry
119210934 CDS
T07626
Symbol
elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119210934 (elp1)
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
119210934 (elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
Beta-prop_EML_2
B-prop_COPA_B_2nd
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
119210934
NCBI-ProteinID:
XP_037317360
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All DBs
Position
2:complement(16894918..16904394)
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AA seq
1313 aa
AA seq
DB search
MRNLKLLKSLRSSELQAPGSPQCLSVRSETGSLLVASQYSITEYDPQTGQVVSEASLTAG
GFLPEDGSGTMVGLQDRAELEVACLSTAGGDVVLFNFNTCQLECVGSVDSGLTSMSWSPD
GELVVLTTGQETIIIMTQNFEPITEVGIHQDDFGEGKFVTVGWGKKETQFHGSEGKKAAQ
KKIQEVQPTAAWDDRTPRVTWRGDGHLFAVSAVCLQTGARKVRVWNREGVLQATSEPANG
LEQALCWKPSGSLIASTQRHPNKHSVVFMEKNGLLHGDFTLPFSKDQAKVKDLLWNIDST
VLAVWLEDFAAGEDKQVNTYLQLWVVGNYHWYLKQSLDFGRDPQKAPVCVCWDPERPLGL
HVVTRSWTSVTYDWGWTTERSPGMDASDNANVAVIDGDKILVTNFRQCVVPPPMCSFELQ
LTSPVNQVTFLCQPQRTNRLAALTSDGQISVYVQDPGGQVNTTSDGFRPMSRPLVLQKAF
RVAVAQEEPLALRQLLWLEDDLFLAVRSGLTPASSTLMMLRPAPGADDTLAVGSEMEVDG
VVVSVVHCSRTGTAALQLEDGKIQKLRWDGAELSVEDWQDSSRCKISFRVPCVQMSLCSI
AGEEHLLGLTDRSHLYAGDTQLASNISSFVVCNDFLLITTHSHTIRCLQLTTLSVKGLQA
ALASDGGQNDESLRRVERGSRIVTVVPQDTRVILQMPRGNLETVHHRALVLAQLRKWLDS
LRFRDSFECMRKLRINLNFIYDHNPKVLLENMQTFITQLDSISHINLFLTELKEEDTTST
MYPRPEDGSVQSQPAPGPKKVDVVCDALRGAMESMDPNKFFLSVLTAHVKKTLPELEIAL
QKVHELRVNPLPAAGAVSAEEALKYLLFLVNVNDLYEHSLGTYDFDLVLMVAEKSQKDPK
EYLPFLNMLKSLETNYQRYTIDKHLKRYRKALHHLSKCGDEHFHEALQLVKEQKLYSEAL
RLYAADGAKHKALSCIYAEHLMEQQQAEQAGLLLWRCGEPVGALQAFASSSSWRNAICTA
QQIPLPPDQLALLARDLAEKLTEQRRYSEAALLLDQYAKDCEEAILALITGSVWEEALRL
IYMHNRQDITETNLRPALLEAVSNQTAFLEAQVATFTRHRTRLAVVREQKERARLDMLDE
DGPDCPEAELYSEASSVMTGSKYSQSNSRVSSRSSKNRRKAERKKLSLKEGSPMEDRALM
YALGEIVTAVDKMREEVHGLLKALVLFQFDKQAEKLQPAYEEALQMMEAALPEVWLDGPQ
NNPAPLTGPNSTANSIMASFQQQQRPAAAQPAAEVLMPPKMRNGVKWKLAILM
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacttgaagctgctgaagagtctacggagctccgagctgcaagctcccggctcc
ccgcagtgtttatctgtgcgctccgagaccggctcgctgctggtcgcttcccaatattcc
atcacagagtacgacccacaaactggccaggtggtcagcgaggcctcactcacagccggg
ggtttcctcccggaggacggcagcggcacgatggtcggactgcaggaccgggccgaactg
gaggtggcatgtttgtccacggccggcggcgatgtcgtcctcttcaacttcaacacctgc
cagttggagtgcgttggcagcgtggacagcggcctgacctcgatgagttggagtcctgat
ggagagctcgtcgttctcactaccggtcaggaaaccatcatcatcatgacccaaaacttt
gagccaatcacagaggttggaatccaccaggacgactttggtgaagggaagttcgtcacg
gtgggttggggaaagaaagagactcagttccacggctcagagggcaaaaaggcagcacag
aagaagatccaggaggtgcagccgacagcggcctgggatgaccgcacgccacgggtgacg
tggcggggcgacggccacctgtttgccgtcagtgccgtctgtctccagaccggagccagg
aaggtccgggtctggaacagagagggggtcctgcaggccaccagtgagcccgccaacggg
ctggagcaggcgctctgctggaaaccctctggcagtctgatcgcgagcactcagcgtcat
cccaacaaacacagtgtggttttcatggagaagaacggactgctgcacggagacttcacc
ctcccattcagcaaagaccaggccaaggtgaaggatttgctgtggaacattgactccacg
gttttagccgtgtggttggaggactttgctgccggggaggacaaacaagtcaacacttac
ctccagctgtgggtggtggggaactaccactggtacctgaagcagagcctggactttggc
agggaccctcagaaggctccggtctgtgtctgctgggaccccgagcgccccctcgggctc
cacgtggtgacgcgcagctggaccagcgtcacgtacgactggggctggaccaccgagagg
agccccgggatggacgccagcgacaacgccaacgtggccgtgattgacggagataaaatc
ctggtgacaaacttcagacagtgtgtggttcctcctcccatgtgttcatttgagctgcag
ctgacctcgccggtcaaccaggtgaccttcctctgccaacctcagcggaccaatcggctg
gcagcgttgacttccgacggacagatctcagtctacgtccaagatccaggaggacaggtc
aacacaacttctgacggtttccgcccgatgtcccgtcccttggtgctccagaaagccttc
agagtggcggtggcgcaggaggagcctctggccctgcgccagctgctgtggctggaggac
gacctgtttttggccgtgagatccggtctgacgcccgcctcctccaccctgatgatgctc
cgcccggctcctggcgccgacgacacactcgccgtcgggtctgagatggaggtggacggt
gtcgtggtcagcgtggttcactgctcgcggaccggcaccgcggcgctgcagctggaggac
ggaaagatccagaaactgcgctgggatggagccgagctgtcggtggaggactggcaggac
tcgagcagatgtaagatcagcttccgcgttccctgcgtccagatgtccctctgcagcatc
gctggggaggaacatctgctcggcctgacggatcggtctcacctgtacgccggggacacg
cagttggcctccaatatttcctcctttgtcgtttgcaacgacttcctcctcatcaccaca
cactcccacaccatccgctgcctccagctgacaacgctcagtgtcaaagggctgcaggcg
gccctggcctcggacggaggtcagaatgacgagtcgctgcggcgggtggagaggggatcc
aggatcgtcaccgtggtaccgcaagacaccagagtgatcctgcagatgcctcgtgggaac
ctggagacggtgcatcatcgtgcgctggtgttggctcagctcaggaagtggttggacagt
ttgaggttcagagattcctttgagtgcatgaggaagctgaggatcaacctgaacttcatt
tatgaccacaacccaaaggttttgctggagaacatgcagaccttcatcacacagctcgac
tccatcagccacatcaacctcttcctcaccgagctcaaagaggaggacacgaccagcacc
atgtacccccgccccgaggacggctcggtccagagccagccggctcctggcccgaagaag
gtggacgtggtttgcgacgctttacgcggcgccatggaatcgatggatccaaacaagttc
tttctgtccgtgctgacggctcacgtgaagaagacgcttccggagctggagatcgctctt
cagaaggtccacgagcttcgagtgaaccctctccctgctgccggcgctgtgagcgccgaa
gaggcgttgaagtacctcctcttcctcgtcaacgtcaacgacctgtacgagcactcgctg
gggacttacgacttcgacctcgtgctgatggtggccgagaagtcccagaaggaccccaaa
gagtacctccccttcttaaacatgctgaagagcctggagaccaactaccagcgctacacc
atcgacaagcacctgaagcgctaccggaaggccctgcatcacctcagcaagtgtggagat
gaacatttccacgaagctttgcagctcgtgaaagagcagaagctgtacagtgaagctctg
cgactgtacgcagcggatggtgccaaacacaaggctctgagctgcatttacgccgagcac
ctgatggagcagcagcaggcggagcaagccggactgttgctatggcgatgcggggagccg
gtcggcgccttgcaggcgtttgccagcagctccagctggagaaacgcaatctgcacggcc
cagcagatcccactgccgcccgaccagttagcgctgctggcccgcgacctggcagagaag
ctgacagagcagcgacgatactcagaagctgctctgctgttggaccagtacgccaaagac
tgcgaggaggccatcttggctctgatcactggctccgtctgggaggaggcgctgcgcttg
atttacatgcacaacaggcaggacatcactgaaaccaacctccgacctgctctgttggaa
gccgtcagcaaccagacggctttcctggaggcccaagtagcgacgttcacgcggcacagg
acccggctggctgtggttcgggagcagaaggagagggccagactggacatgctggacgag
gatggtccagactgcccagaggcggagctttactctgaagccagcagcgtgatgaccggc
tccaaatactcccagagtaactcccgcgtctcctcgagatcgtcaaagaaccgccgcaaa
gcggagaggaagaagctgagcctgaaggagggaagcccgatggaggacagagcgctgatg
tacgctctgggagagattgtcaccgccgtggacaagatgagagaggaagtgcacggcctg
ctgaaggctctggtgctcttccagtttgacaaacaggcggagaagctgcagccggcctac
gaggaggctctgcagatgatggaggcggcccttcccgaggtgtggctggacggcccgcag
aacaacccggctccgctcacggggccgaactcgactgctaacagcatcatggcttctttc
cagcagcagcagaggcctgcagccgctcaaccagctgctgaggtcctcatgccgccgaag
atgagaaatggcgtcaagtggaagctcgctattctgatgtaa
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