Pungitius pungitius (ninespine stickleback): 119210965
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Entry
119210965 CDS
T07626
Symbol
tnpo3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
ppug03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119210965 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119210965 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119210965 (tnpo3)
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
119210965 (tnpo3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
KAP122_middle
HEAT_MROH2B_C
TOR1L1_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
119210965
NCBI-ProteinID:
XP_037317406
LinkDB
All DBs
Position
2:78771..89405
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AA seq
923 aa
AA seq
DB search
MEGGKPNLALVYQAVQALYHDPDPSGKERASVWLGELQRSMYAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTSFYELPPETHNALRESLLTHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYNNDISSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTV
VTLLTSCVEKAGSDEKMLIKVFRCLGSWFNLGVLDSNFMASNQLLMVLFQVLQRDETSTN
LHEAASDCVCSSLYAIENVESNMGLALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKINDAA
LHNIFRPYIQRLLHCLARHCQLDPDHDGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKEGNPSWEVTEAVLFIMAAIAKSVDPENNPTLSEVLQQVVLLPETVHIAVRYT
SIELVGEMSEVVDRNPRFLDPVLNYLMKGLREKSLASAAAKAIHNICSVCRDHMAQHFQG
LLDIARALDSFVLSTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVMALKKLLAEES
TNGKSADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNTHQADNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQQNGLRNHPDTVDDLFRLATRFVQRSPVTLLSSSIIVHIIQCA
IAATSLDHRDANCSVMKFVRDLVHTGVANDHEEDFEVRKQLIGQAMEQHGQQLITQLMHS
CCFCLPPYTLPDVAEVLWEVMVFDRATFCRWLENALKGLPKETSGGAVTVTHKQLTDFHK
QVTSAEECKQVCWAIREFTRLFR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaggggggcaaaccaaacctggctctggtttaccaggcggtccaggccctctaccac
gacccggacccgtccgggaaggagcgagcctcggtgtggctcggggagctccagagatcg
atgtatgcttgggagatctcagatcagcttttgcagctcaaacaggatgtcgagtcgtgt
tattttgctgctcagacgatgaagatgaagatccagacatctttctacgagcttccaccc
gagacccacaatgcactgcgagaatcgctactgacccacatccagaacctcaaagacctg
tcacccatcatcgtcacacagctggctttagccatcgcagatctggctcttcagatggcc
tcatggaaaggatgcgttcacacgctcatagaaaagtacaacaatgacatcagctccatg
cccttcctcatagagattctcaccgtgctgccagaggaagttcacagtcgctctctacga
atcggcgccaaccggaggacggaaatcatcgaggatctggcttattattccagcactgtc
gtcactttgctgacgtcatgtgtggagaaggcgggaagcgatgagaagatgctcatcaag
gtctttcgttgtttgggtagctggttcaaccttggagtcctcgacagtaacttcatggcc
agtaaccagctgctcatggtcctcttccaagtcctgcagagggatgaaacctccaccaac
ctccacgaggcggcgtcggactgcgtctgctcgtctctctatgccatagagaacgtggag
agcaacatgggtttggctcttcagctcttccagggcgtcttgactctggagacggcctat
cacatggccgtggctcgagaagacctcgacaaagtgctcaactactgcaggatctttacc
gaactgtgcgagacatttttagagacgaccgtccggagtcccgggcaggggatgggagac
ctgaggacacttgagcttttgctgatctgtgcaggacacccgcagtacgaggttgtggag
atctcctttaacttctggtaccgtcttggagaacatctgtataaaataaacgatgcagct
cttcacaacatcttcagaccatacatccagagacttctgcactgtttggcccgacactgt
caactcgatccagaccatgacggaatcccggaggacactgatgattttggggagttcagg
atgagagtctctgacctcgttaaagatgtcatttttcttgttggatccatggagtgtttt
tctcagttatattctacgttaaaagaaggaaacccttcctgggaagtgacggaagcagtt
ctattcatcatggctgcaattgcaaaaagtgttgatccagaaaacaaccccacgctgtcg
gaggtgttgcagcaggtggttttacttccggaaaccgtccacattgcagttcgttacacg
agcattgagctggtcggcgagatgagcgaagttgtagacagaaacccaagattcctcgac
cccgtgttaaattacctgatgaaaggcctcagagagaaatcgctggcgtcggcagcagcg
aaggcgatccacaacatctgctcagtgtgcagagaccacatggctcagcacttccagggt
ctgctggacatcgctcgggccctcgactcattcgtcctgtcgactgaggccgctgtagga
ctgcttaaaggtacagctctggtcctggcccgtcttcctctggagaagattgcagaatgt
ctcagtgatctctgtgctgttcaagttatggctctgaaaaagcttctggctgaagaatct
acaaatggtaagtcagctgatcccaccgtctggctcgacaggctggctgttatcttcaga
cacacaaatcccattgtggagaacggacagactcacccctgtcagaaagtcattcaggag
atctggccagtgctgtcggagacgctgaacacccatcaggcggacaacaggatcgtggag
cgatgctgtcgctgtctcaggtttgctgtacgctgtgtagggaaaggctccgcctccctg
cttcagccactcgtcactcagatggtaagtgtgtaccaggtgtatccacactcctgtttc
ctttacctgggcagcattctggtggacgagtatggcatggaggagggctgccggcaaggg
ctgctcgacatgttgcaggctctgtgcatgccgacgttccagctgttggagcagcagaat
ggtctgaggaatcaccctgacaccgtggacgacctgttcagactggccaccaggtttgtc
cagaggagtcccgtcactttactcagcagcagcatcatcgttcacatcatccagtgcgca
atcgctgccacctcattggaccaccgagacgccaactgcagcgtaatgaagttcgtccga
gacctcgttcacaccggagtcgccaacgaccatgaagaggactttgaggtgaggaagcag
ctgattggtcaggccatggagcagcacggtcagcagctcatcactcagctgatgcactcg
tgttgtttttgcctgcctccatacactctgcccgacgtggccgaggtgctgtgggaggtc
atggtgtttgatagagctacgttctgtcgctggttagaaaatgctctgaaaggtttacca
aaggagacgtcaggaggagctgtgactgtcactcacaaacagctgactgacttccacaag
caggtcaccagtgctgaggagtgtaaacaggtgtgttgggccatcagagagttcaccaga
ctgttccgatag
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