Pungitius pungitius (ninespine stickleback): 119211014
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Entry
119211014 CDS
T07626
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119211014 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119211014 (nup107)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119211014 (nup107)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119211014 (nup107)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119211014 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
Pyocin_S
DUF3990
TetR_C_31
Motif
Other DBs
NCBI-GeneID:
119211014
NCBI-ProteinID:
XP_037317486
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All DBs
Position
2:1398473..1418102
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AA seq
913 aa
AA seq
DB search
MDWTPLRSCSRGESQLLSPVVRDDLVTTAARRMKKVAFPSPGSPVLSTVTPARPMTRTTP
ASLFRQAVTPRVPDVSSILGPGGRTPRYTHTPKNAFSSPNLDESDWTDSIYVFPTSGMEN
SSFFTDDITNLSSALLKDDDPGEAAAASLFPEFLESFLKHSSTAVFELLEEYQLILQDKV
DVLQSVVLRAGQNSKTAGVRWLLQQENCSWRLITSLYRDRVQLALEDDIVTDMVVPSESE
KVVVEQLFQRDAVIRQSQLVVDWLESVAKDQIGDFSDNIEYYAKNVCWENTLHALKLRRK
SGAAFSIPLVTELDPDAPLRQQRPLADLDREDDARLLKNLFTLIRAGMTEEAQRLCKRCG
QAWRAATLEGWKLYHDPNRTSVSAELQAVEGNPQRGIWKTCCWRMAEEEQLNRYERAIYA
ALSGNLKPLLVVCESWEDCVWAHFRVMVDSLVEKDLMSSGMAQQEVEMLPREYLEANWTM
EKVFEELQASELKRVLEETKEHYHVIQKFVILGDLDGLLEEFSDWLTASKPLPSHLLRFM
THLLLFYRSLGLALKEEVCVDVLKAYISLLIRDQQTELVASYVSQLPADLATVQYAAFLE
TVRQPELRPRCLQLATDAGLDVAAVTKLVVETVRESDATEFTHHNQTLEIGTTKEDLKKI
DVIDWLLFDPAHRSESLKQSNAIMRKFLALQKHDAAKAVFSKVPEDSMREIYCQWSGVGQ
TTPLPAEEENAIREHLCIRAYLEAHEAFTDWFSHSSSPPQKPAPASEAKFTERVANEMRE
KEYQAALSSWSCRLDVLTEDVKERIYNVLLFVDGGWMIDNREDSEADPERGHQTAALRSL
CLPRLTFLLLSVLQNSSRHQEALRLADIISSDQHRLYQVFSKEELRRFLQKLRESSLSLL
DQGLDPLGYELQP
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggactggacaccattgcgttcatgctccaggggtgagagccagctgctgtctccggtg
gttcgagatgacttggtgacgactgccgcacggaggatgaagaaggtggctttcccgtcg
cccgggagccccgtcctctccactgtaacaccagcgcgccccatgacgaggaccacgccg
gcttcactgttcagacaggctgtaactcccagagttccagatgtttcctccattttaggt
ccgggaggtcgaacccctcgatacacacatacacccaaaaacgccttcagcagtccgaat
ttggatgagagtgattggaccgatagcatctatgtcttccccacctcgggaatggagaac
agcagcttcttcacagacgacatcaccaacctgagctccgccctgctgaaggacgacgac
cccggcgaggctgcggctgccagtcttttcccagaattcctcgagtccttcctgaagcac
tcttctactgcggtgtttgagctgctggaggaataccagctcatccttcaggacaaggtg
gacgttctgcagtctgtggtcctcagagcgggtcagaacagtaagaccgcaggagtccgc
tggttgctgcagcaggagaactgctcctggaggctcatcacctccctatacagggaccgg
gtccagttggcgctagaagatgacattgtgactgacatggtggttcccagtgaaagtgag
aaggtcgtggttgagcagctttttcagcgggatgctgtcatacgtcagagtcagctcgtc
gttgattggctggagagcgttgccaaggatcagattggagacttttctgataacatagaa
tactacgctaagaacgtctgctgggagaacacccttcatgctctgaagctgaggaggaag
agcggcgctgccttctccatccctctagtcacggagctggacccggacgcacccctcagg
cagcagcgccccctggcggacctggacagagaggacgacgcccgcctgctgaagaacctg
tttaccctgatcagagccgggatgaccgaagaggctcagaggctgtgtaagcgctgtggt
caggcctggagagccgccactctcgaaggctggaaactctaccacgaccccaataggacc
tcagtgagtgcagagctgcaggcggtggaaggaaaccctcagagaggaatctggaagacg
tgctgctggcggatggctgaggaggagcagctgaaccgctacgagagggcgatctacgcg
gcactcagcgggaacctcaaaccgctgctggtggtgtgtgagtcgtgggaggactgtgtg
tgggctcacttcagagtgatggtggactcgctggtggagaaggatctgatgtcgtcgggt
atggcccaacaggaagtggagatgctgccgcgggaatacctggaggccaattggacaatg
gaaaaggtgtttgaggaacttcaagcctccgagttgaagagggtgttggaagagacaaaa
gagcattaccacgtcatccagaagtttgtcatcctgggagacctggacggtctgttggag
gagttttctgattggctgacagcctcgaagcccctcccctcccacctgctgcgtttcatg
actcacctgctgctgttttaccgctctctgggtttggctctgaaggaggaggtgtgcgtg
gacgtcctgaaggcgtacatctccctgctgatccgggatcaacagaccgagctggtggcg
agctacgtcagccagctgccggccgacctcgccaccgtccagtacgccgccttcctggag
acggtgaggcagcccgagctgcgtcctcgctgcctgcagctcgccacggacgccggtctg
gatgttgccgcggtaaccaagctggtggtggagaccgtgagggagagcgacgccacggag
ttcacgcaccacaaccagacgctggagatcgggaccacgaaggaggacctaaagaaaatc
gatgtcatcgattggctgctttttgaccccgcccatcgctcagagtccctgaaacagtcc
aacgccatcatgaggaagtttctggccctgcagaaacacgacgcagccaaggcggtcttc
tctaaagttccagaggattcaatgagggagatttactgccagtggtcgggggtcggtcag
accacgccgcttcctgctgaggaagagaacgccatcagagaacacctgtgtatcagagcc
tacctggaggctcacgaggcgttcactgattggttcagtcacagcagctcgcccccccag
aagccggcacccgcctccgaggccaaattcacagagagagtagccaatgagatgagagaa
aaggagtaccaggccgctctgtcttcatggtcgtgccgtctggacgttctaactgaagat
gtgaaggagagaatctacaacgtgctgctgttcgtggacggaggctggatgatcgacaac
agagaggactccgaggcggatccggagcgcggccaccagacggcggcgctgcgctcgctc
tgtctgccgcgcctcaccttcctgctgctcagcgtgctgcagaactcctcccggcaccag
gaggccctgcgcctggccgacatcatctcctcggaccagcaccgcctctaccaggttttc
tccaaagaggagctgaggaggttcctccagaagctgagggagtcgtcgctctctctgctg
gaccaaggactcgacccactgggctacgagctgcagccatga
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