Pungitius pungitius (ninespine stickleback): 119211130
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Entry
119211130 CDS
T07626
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119211130 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119211130 (rbm22)
Spliceosome [BR:
ppug03041
]
Complex B
Other components
Prp19-related factors
119211130 (rbm22)
Complex C
119211130 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_12
zf-CCCH_PARP12
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
119211130
NCBI-ProteinID:
XP_037317687
LinkDB
All DBs
Position
2:complement(34096861..34101975)
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AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEFGLPIQVRDTGLSVKDEVPKSDVNKEYYTQN
MEREIANSDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKSISTLYIGGLG
DTVTDGELKSHFYQFGEIRTITVVQRQQCAFIQFATRQAAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGIKDGVSEMGTRLDPVPGLPGALPPPPSLDEEAPANYFNLEPGTSPSV
INITLPPPPGINPPPPGFGPPMFHPMAHMAPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGSRHGE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccctgggatccaacacctacaatagacagaattgggaagacgcggatttc
ccaattctgtgtcaaacatgtttaggagaaaacccgtacattcgaatgaccaaggagaag
tatggtaaagaatgcaagatttgtgcgcgaccatttactgtgttccgatggtgtccaggg
acgcgtatgcgttttaagaaaacagaggtctgtcagacctgcagtaaaatgaagaatgtt
tgtcagacatgtctgctcgatctggagttcggtttgcctatccaggtcagagacactggg
ctatcggtaaaagatgaggttcctaaatctgatgtaaacaaggagtactatactcagaac
atggaaagagagatagcaaattctgatggcacacggccagtgggccagttgggtaaagcc
ccgagctccagtgatatgttgctgaaactggcccggaccacgccatactacaagaggaac
cggccacacatctgctccttctgggtgaagggagagtgtaagagaggggaggaatgtccc
tataggcacgagaagcccacagatccagacgatcctctggccgaccagaacataaaggac
cgttactacggcatcaatgacccagtggcggacaagctgctgaaacgggcctcaacaatg
ccccgcctggacccgccagacgacaagtccatctccaccctctacatagggggtttggga
gataccgtcactgatggagagctcaagagtcacttttaccagtttggggagatccgcacc
attaccgtagtccaaaggcagcagtgtgccttcatccagtttgccacccgacaagctgct
gaaatggctgctgaaaagtccttcaacaaactgatcattaatggacgcaggcttacagtc
aagtggggaaggtctcaggcagcaagagggaaggagggcatcaaagatggcgtcagtgag
atgggcaccagacttgaccctgtacctggattgcctggtgctcttcctccaccaccatct
ttggatgaagaagctcctgcaaactactttaatctggagcctggcacctctccatcagtc
atcaacattactctgcccccacctcctggcatcaacccgcctcctccaggttttggcccg
ccaatgttccaccccatggctcatatggctccaccaatgccccctccaatgagcatgagg
ccacctggtcaaatccactacccctcccaggaccctcagcgcatgggggcccatgctgca
cacggctctcgtcacggtgaatga
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