Pungitius pungitius (ninespine stickleback): 119211148
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Entry
119211148 CDS
T07626
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119211148 (ssrp1a)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119211148 (ssrp1a)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
119211148 (ssrp1a)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
119211148 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
119211148
NCBI-ProteinID:
XP_037317721
LinkDB
All DBs
Position
2:complement(22249345..22259048)
Genome browser
AA seq
716 aa
AA seq
DB search
MGDTLEFSDIYQEVKGSWNDGRLRFGKQSVVYKSSKTGKVDSIPTSDLNQAQWRRVCLGH
GIKLGTHSGHIYKYDGFRDTDFEKISEYFKANYKVELSEKDMCVKGWNWGTAKFSGPLLS
FEVNESTAFEVPLANVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQADERQDPVE
AFAENVLSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDLSLTLNMSEDDVERRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQFTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEGMKGKIDEYSDSDEDQHDAYLERMKAEGKIREEGNDSEESDGESDES
FNPGEEDDDIAEEYDSNASASDSSDDGDDDDGDGSSSKKKAPKVKVVKEKKERKPRKEKK
QKDKGGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLGKDDKEEWDIKA
AEAKRQYDKAKQEYKESGGGEAAAPAATSSSKKESKKSGGAKEEKKRKSAGADKEKERAV
ANDSFKSREFIETSEESSSDTDRKSKTKAKRKKESDDEMEEEEAVSTPASSEEESD
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacgctggagttcagcgacatttaccaggaggtcaaaggctcctggaacgat
gggcggctgcgtttcggcaaacaaagtgtggtttataaaagcagcaagacggggaaggtg
gacagcatcccgactagcgatctcaaccaggcccaatggaggcgagtgtgtttaggtcac
ggcatcaagctgggcacccattcaggacatatctacaaatatgacggcttcagggacacg
gactttgagaaaatctctgagtacttcaaggccaactacaaggtggagctgtcagagaag
gacatgtgtgtgaagggatggaactggggaacagccaagttctcggggccgctgttgtca
tttgaagtaaatgaaagcacagctttcgaggtgccactggccaacgtgtcccagtgtgcg
acggggaagaacgaagtcaccctagagtttcaccagaacgacgacacagaggtctccctc
atggaggtccgcttctacgtcccccccagccaggccgacgaacggcaagaccccgtcgag
gcgtttgctgagaatgtgttgtctaaggccgacgtgatccaggccacaggggacgctgtg
tgcatcttcaaagagctccagtgtcttacacccagaggaaggtacgacatccggatctac
ccgacgttccttcacctccacggtaaaacctttgactacaagattccctacaccacggtc
ctccgtctcttcctgctgccacacaaggatcagaggcagatgttctttgtgatcagtctg
gatcctcccatcaagcagggtcagacgcgttatcactttctcatcctgcttttctccaag
gaagaggacctgagcctcaccctcaacatgagcgaggatgacgtggagcgccgctttgag
gggaaactcagtaaaaacatgtccggctctctgtatgagatggtcagcagggtgatgaag
gccctcgtcaaccgcaagatcaccgtgcccggaaacttccagggtcactctggggctcag
tgcatcacctgctcctacaaggcgtcctcgggcctcctctatcccctggagaggggcttc
atctatgtccacaagccccccgtgcatctgcgcttcgaggagatctcctgcgtcaacttc
gcccgaggcaccaccacgacgcggtcctttgactttgagatcgagaccaagcagggaaat
cagttcaccttcagcagcatcgagagagaagagtacggcaaactgtttgactttgtgaac
gccaagaaactcaacatcaagaaccgaggcttcaaagagggcatgaagggtaagattgac
gagtacagcgactcggacgaggaccagcacgacgcctacctggagaggatgaaagccgag
ggcaagatcagggaggagggcaacgacagcgaggagtcggatggcgagagcgacgagtcg
ttcaaccccggcgaagaggacgacgacattgccgaagagtacgacagcaacgcgtcggcg
agcgacagcagcgacgacggggacgacgacgacggcgacggcagcagctcaaagaaaaag
gccccgaaagtcaaagtggtgaaggagaaaaaagagaggaaaccacgcaaagagaaaaag
cagaaagataagggcggccccaagaggccgatgagcgcctacatgctgtggctcaactcc
agccgcgagcgcatcaagtcggagaacccgggcatctccatcacggagatttccaagaag
gccggagagatgtggagacaactgggcaaggacgacaaggaggagtgggatatcaaggcg
gcggaggcgaagaggcagtacgacaaagcgaagcaggagtacaaggagagcggcgggggg
gaagctgctgctccagcagcgacatccagctccaagaaggagagtaaaaagtctggcggg
gcgaaggaggagaagaagaggaagtccgccggcgcggacaaggagaaggagcgggcggta
gccaacgacagctttaagagccgagagttcatcgagacgagcgaggagagctcgtcggac
accgaccgcaagagcaagaccaaggccaagaggaagaaggaatcggatgatgaaatggag
gaagaagaggccgtgtccacacctgccagctcagaagaggagtccgactaa
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