Pungitius pungitius (ninespine stickleback): 119211176
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Entry
119211176 CDS
T07626
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119211176 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119211176 (nup50)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119211176 (nup50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
EVH1_PP4R3
Motif
Other DBs
NCBI-GeneID:
119211176
NCBI-ProteinID:
XP_037317779
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All DBs
Position
2:complement(479873..484328)
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AA seq
434 aa
AA seq
DB search
MAKRIADKELTDRNWDQEEEGEEAGTFLVASEDVLKSRPIKKAKRRNIGEVEGSGSFKGF
KGFSLAAAAPSGGAIASAPTAFSGFGNGGGFTGLGGLANGKGIAPAFGGFSSPSATAPPA
PGLTFTGPASSDITAQQTNGSPQGSSSNKEYSRQLTALNCSVRDWITKHVNGNPLCDLNP
IFRDYERHLASIERQYGAGSSSDEDKKKTATTPPAAPPAAAPSSSSSSSSAAPFSFGKAP
TDDPSKGPGVTFNFGQKVDGSVLGSLGSKATPPSFSFSTGQTSVFGSSFSGSKAEEARRP
DENGEEESEEPPKAEIKEVKEDDAFYSKKCKLFYKKDSEFKEKGVGTIHLKHTEDSKVQM
IIRADTNLGNILLNILLQASMPFSRVGKNNVMVVCVPNPALDDKNPGAPVPLLIRVKTAE
DADELHRTLEEKKG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaggatcgctgacaaagagctaacggacaggaactgggatcaggaggaggaa
ggagaggaggccgggacgtttctggtcgcgagtgaagatgtgttgaagagccggccgatc
aagaaggccaaacgcaggaacatcggagaggtcgagggcagcggatccttcaaggggttt
aaaggcttttctctggcggcggcggcgccaagcggcggcgccatcgcctccgctccgacg
gcgttctccggttttgggaacggcggaggcttcactggcctcggaggcctcgccaacgga
aaaggcatcgccccggcgttcggagggttctcctccccctctgcgacggccccccctgca
ccaggtctgacgttcactggccccgcctcctctgacatcacagcccagcagaccaatggc
tcgcctcagggctccagcagcaacaaggagtacagccggcagctgacggccctgaactgc
tcggtgagggactggatcacaaagcacgtcaacgggaacccgctctgcgacctcaacccc
atcttcagggactacgagcgccacctggccagcatcgagcgccagtacggagccggctcc
tcctccgacgaggacaagaagaagaccgccacgacgcccccggccgcccctcctgctgct
gctccttcctcctcctcctcctcctcctcggcggctcctttctccttcggcaaagctccg
acagacgacccgtccaaaggccccggtgtcacgtttaacttcggccagaaggtggacggc
tccgtcctgggctctctggggtccaaagcgacccccccgagcttctccttctcgaccggc
cagacctccgtgttcggatcgtccttcagcgggtccaaggcggaggaggcgcggcgcccc
gacgagaacggagaagaagagtcggaggagccgccgaaggccgagatcaaggaggtgaaa
gaagacgacgccttttactccaagaagtgcaaactgttctacaaaaaggactctgagttc
aaagagaaaggagtcggaacgattcacctcaaacacacagaggactctaaagttcagatg
atcatccgcgccgacaccaacctggggaacatcctgctgaacatcctgctgcaggcctcc
atgccgttctcgcgggtcggtaagaacaacgtgatggtcgtgtgcgtccccaacccggcg
ctggacgacaagaaccccggcgctccggtgccgctgctcatcagggtgaagacggccgag
gacgccgacgagctgcacaggacgctggaggagaagaagggctga
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