Pungitius pungitius (ninespine stickleback): 119211200
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Entry
119211200 CDS
T07626
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119211200 (sh3tc2)
Membrane trafficking [BR:
ppug04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
119211200 (sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
SH3_2
SH3_1
SH3_9
TPR_1
TPR_MalT
TPR_10
SNAP
Motif
Other DBs
NCBI-GeneID:
119211200
NCBI-ProteinID:
XP_037317813
LinkDB
All DBs
Position
2:31124582..31139099
Genome browser
AA seq
1545 aa
AA seq
DB search
MALISGGCRLLGLMASRCCRPLLNSCCCGRLLKDCLSSLTDISPAELDALWREPPYTLGG
ANEHFSGNDIMTQGEGEEDGIPVAESCEGGAAPDNYWKKKAALRGSTVSLGGKFSTDIEL
LFTGRRRSGEDPDGALQESLRTRLRVVESNSQDVIQLFKDLSARLVSIHAEKDSFVLTFK
TVEEIWKFSTYLALGYVARCLENFLCDQSFWLDPELLSDLQINVSVDEDRLATLYLGLLL
QEGSFFAKALFTRTDYNKDDEEQLSFKKNDLLMVRDTGQESMGEGTMLSTGNHGLVPVNA
MQPLPYPFYQWFLRNYPVNVGCSPAEKEPYEHAIVTGSCAAVVDYSPVGPDELQLSQGDI
VEIQGLLVRGLDVFIATHASTGHTGFVHKVHVKPLDTVPLDRRLVFLTAEERASLAQVNP
CSSEPSDNGLLERLFSSDISSVYRLDRLDETDFLYIRKRPTHDHKIPASTRHSVMSEKSE
GASTYLSSPRTSVSLPSPRLSFYQSHNPLPREGERLSFHVDDTFKEMDEFQEDPPLFLEE
NSWEGEDSEFSDPTLTLLNHEHFQEDFLPLYDLKYSFLWVTFSGKTEDELLGHLESVRES
AKRMGLDWAHRRACFLLGRLCARKLKLSQARVYYEEALGVRVDSFSDTPLLVALYTNLTA
VYLKQRMTDKLPQTLEKASSLLLCLPCHTFTSTDEVELLQLLLRRSVVTGDKHLEARVCY
LISTLFLLRRKTDDALPFVERLQFLSLTLSAAEGRPIVPLDLNWLLSWLYHRKYMPYLAL
ASLSLDSRQDHSLDEGFKKIELFIRNSVRLNPCWNEGTSLLPAQIVIYLQQALILAEQAE
DIKTQRDLCQGLATVYQQYDDLDRAVLCAQQAVETGGHINEEEGFEASVLLGWLLVLTGQ
AERAQSVLQPLLTSLQGTDSPTQRGVIHNLLALCMRRQGRIPEAGWHFHSACVISRESGN
QRNQALALANLGCLALDVGAPLVAERFLVRSLHLFLELWESPIDEEHVQTYLWLGRSYKD
RRRSQDSRACYEMGLLIALHARNLHSRMVVAKVLSRVYADMLLYGQSIVYYEHCVSVARE
LKDKRLEGEYLEILSSLYLTLNTERSSRKSLDYTKQSLRISIDLGKREEESETWLQVGRI
YYLIQEDELADMYLQAAVKTALRMNDHHFALSIYEEAGDVYFKGSRNRMASVPFYRDGSL
PFARSIKDIHSEFRLLSKLTELLMNQGEQEEALQYATLAVQIADKTGLHVNERTAYHRLA
TIYYNLQQYELAENYYLKSLSFCPPWLQDPLEARYYTKLYCRLANVTLHRLKDSFDAVGY
FHLALAAALEDRANPEALYVVYMKLAEIHGNHLPDDQLCRDYRDRAQSLKTVLAGEEGAA
AEENMKDVDTGTGQKTDKDSAADTESLLRTNSSFTSTENEKCEDHLLVNTGIILRDTEDG
STDTAIGDNQVNRDGDGPLLDPLGPGTETTTSHSYSDSIFTESFDTAKEQISDCSTSTDT
LQTHQNQADDKDFDTDYHTPSQVPDHLPSASQDTHSDVQDEQKTP
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatctccgggggctgccggctcctgggcctgatggcgtctcgttgctgcaga
ccgctgctcaactcctgctgctgcggacggctcctcaaagactgcctctcctccctcaca
gacatctctcctgctgagctggacgctctttggagggaaccaccatataccctcggggga
gcaaatgaacacttctcaggaaatgacatcatgactcaaggtgaaggtgaggaggacggc
attccagtggcggagtcatgtgaaggaggggcggcgcccgacaactactggaagaagaag
gcggccctgagaggaagcactgtgtcactgggagggaaattctccacagacatcgagctg
ctgttcaccgggcggcggcgctccggcgaggaccccgacggggccctgcaggagtcgctg
cgcacccgactccgagtggtggagagcaacagccaggacgtcatccagctcttcaaggac
ctgtcggcgcgtctggtgtccatccacgctgagaaggatagcttcgtgctcacgttcaag
accgtggaggaaatctggaagttttctacttacctagcattaggttacgtggcccgctgc
ttggagaacttcctgtgtgatcagtccttctggctggatccagagctgctcagtgacctg
cagatcaatgtcagcgtggacgaggatcgactggccaccctctacctgggactgttactg
caggagggctctttcttcgccaaggcgttgttcacaaggacggattataacaaggacgac
gaagagcagctgtcgttcaaaaagaacgatttgctgatggtgagggacacggggcaggag
agcatgggggagggcaccatgctctccacaggaaaccacggcctagtgccagtcaacgcc
atgcagccgctgccgtaccccttctaccaatggttcctgaggaactacccggtcaatgtt
ggatgctcgccagcagaaaaggaaccatacgaacatgctattgtgacaggttcctgtgca
gctgtggtcgactacagtccagttggcccggatgaacttcagctgagccaaggagacatt
gtggagatccagggtcttctggtccgaggcctggatgtgttcatagcaacgcacgcttcc
acgggtcacactggtttcgtacacaaggtccacgtcaagcctctggacaccgtacccctg
gacagacggctagtctttctgactgccgaggagagggcgagcctcgctcaggtcaacccc
tgcagctccgagccaagtgacaacggcctgctggagagactcttctcgtccgacatcagc
tccgtgtacaggctagacaggctggatgagacagacttcctgtacatcagaaaacggcca
acacacgatcacaagatccctgccagcacccgtcacagtgtcatgtcagagaaaagtgaa
ggcgcctccacctacctgtcctctcctcgcacctctgtctctcttccctcccctcgcctc
tccttctatcagtcccacaatcccctgcctcgcgagggcgagcgtctgtccttccatgtg
gacgacacattcaaggaaatggatgagttccaggaagacccaccgcttttcttggaggag
aacagctgggagggggaggactctgagttcagtgaccccacactgacactgctcaaccat
gaacacttccaggaagacttcctgccactgtacgacctgaagtactccttcctctgggtg
accttcagtggcaagactgaggacgagctattgggtcaccttgagagtgtcagggagagc
gccaagaggatgggcctggactgggcacatcgacgggcatgcttcctgttgggaagactc
tgtgcccggaagctaaagctatcccaggcccgtgtgtactacgaggaggctctcggggtt
cgcgtggacagcttctctgacacgccgctcctcgtcgctctctacacaaacctcaccgcc
gtctacctgaagcagcgtatgacggacaagctgccccagaccctggagaaggccagcagc
ctgctcctctgtctcccctgccacaccttcacctccacggacgaggtggaactgctgcag
ctgctgttgagaaggtcggtggtgacgggggacaaacacctggaggctcgcgtctgctac
ctcatctccaccctcttcctgctgcgcaggaagaccgatgacgccctccccttcgttgag
cgactccagttcctctcgttgacgctctcggccgccgaagggcgccccatagttcctttg
gacctcaactggctcttgagctggctctatcatcgcaaatacatgccgtacttagcgctg
gcctctctgagcctggactcaaggcaggaccactcacttgacgaaggtttcaagaagatc
gagttgtttatcaggaactctgttcgcctgaacccgtgctggaatgaaggaacctccctg
cttcctgcccagatagtgatttaccttcagcaggccctgattttagcagagcaagcggag
gacatcaagacacagagggacctgtgtcagggcttggccacagtctaccagcagtacgac
gatctagacagggcggtgctgtgtgctcaacaagctgtggagacgggaggccacatcaac
gaggaggagggcttcgaggcctccgtgctgctcggctggctgctggtgttgacgggccag
gctgagagggcccagagcgtcctgcagccactgctcacctcactacagggcacagacagt
cccacgcagcgaggggtgatccacaacctcttggctctgtgcatgaggcggcagggtcgc
atcccagaggccggctggcatttccactctgcctgtgtgatctcaagggaaagtggaaac
cagaggaaccaggccctggcactagccaacctgggctgcctggcactggatgtgggggcg
cctttggtggcagaacgtttcttggtcagatccctgcatctttttctggagctgtgggaa
agccctattgacgaagagcatgttcagacttacctctggctggggaggagctacaaggac
aggaggaggagccaggacagcagggcctgttatgaaatggggctgctaattgctctacat
gccagaaacttacacagtcggatggtggtggccaaggtgctgagtcgtgtgtatgccgac
atgctgctgtacggccagagtatcgtgtactacgagcactgtgtgtcggtggccagggaa
ctgaaggacaagagactagagggagagtatctagaaatcctcagcagcctctacctcaca
ctcaacacggaaagatcatctcgcaaatctctggactacaccaagcagagcctaagaatt
tccatcgatttaggcaagagagaggaagagtcagagacctggctgcaggtggggcgcatc
tattacctcatccaggaggacgaactagcggatatgtacctgcaggcagcagtgaagacc
gccctgaggatgaatgatcatcacttcgctttgagcatctacgaggaggcaggagacgtc
tacttcaagggctccaggaaccgaatggcttcggtgcctttctacagggatggcagtctt
ccatttgcacgcagcatcaaggacatccattcagagttccgtttgctgagcaaactgaca
gagctgttaatgaaccagggagagcaggaggaggccttgcagtacgcaacactggccgtt
caaatcgccgacaaaacagggttgcacgtgaatgagaggacagcctaccaccggctggct
accatctactacaacctgcagcagtacgagttggcagaaaactactacctcaagtccctg
tccttctgtccgccctggctgcaggaccctctggaggctcgctactacaccaagctgtac
tgcagactggccaacgtcacgctgcacaggctgaaggattcatttgacgctgtgggctac
ttccatttggctctggcagcggccctggaggaccgagctaacccagaggctctgtatgtg
gtgtacatgaagctggccgagatccacggcaaccacttgcccgatgatcagctgtgcaga
gactacagagacagagcccagagtctgaagacagttctggctggagaggaaggcgctgct
gctgaggagaacatgaaggacgtggacacagggacgggccaaaagacggacaaggactct
gctgctgatacggaaagtttgctgagaacaaactcgagtttcacttcaactgaaaatgaa
aaatgtgaagatcacttgcttgtaaatactggaataattctgagagacacagaggacgga
tccacagacactgcaattggagataatcaagtgaatcgtgatggcgacggccctcttttg
gaccccttggggcctgggacagaaaccacgaccagtcactcgtacagtgacagtattttc
accgagtcctttgatacagccaaggagcaaatctcagactgcagcacttccaccgacact
ttgcaaactcaccagaaccaagcggatgataaagactttgacactgactatcacacgccg
agtcaagtacctgatcatctcccaagtgcatcacaagacacacattctgatgttcaggat
gaacagaaaactccctaa
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integrated database retrieval system
