Pungitius pungitius (ninespine stickleback): 119211319
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Entry
119211319 CDS
T07626
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119211319
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppug02000
]
119211319
Transporters [BR:
ppug02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
119211319
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
119211319
NCBI-ProteinID:
XP_037318034
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All DBs
Position
2:complement(21213077..21224993)
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AA seq
556 aa
AA seq
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MSLNVPGLVVMVLFYLLVLGTGIWASVKSKRLQKSSQGDQTEITLLGNRGISLVVGVFTM
TATFVGGGFIMGLTEVVYTPTMGLTWAVMPASAALSFIVGGLFFAKTMRDRRYVTMMDPF
QIKYGNAISAVLSLALLISDIIWVTGTLIGLGATMAVILDLPYSVCIWISASVAIIYTLL
GGLYSVAYTDIIQLTLIFLSLWLCVPFIFMNTHSTDITKTAFNFTYQAPWVGSVDKERAW
RWIDNFLILSLGNLGYQDFHQRTLSAASSATARITCFVAAPLIFILGIPGVLIGAVAAST
DWNTTAYGSPSPYERGEASQVLPIVLQHLTPQYISIIGIGAIAAAVMSSTDSALLSAASI
FTSNIYRNMMRTTASDRELQWVIRATVVLAGLAGTALTFVHNSVMFFWILGSGITYTVMF
PQLVCVLFFHISNGYGSIVGLVVTVVMRVLSGEPTIGLPIVLHLPGCTLENGVYVQHAPV
QTICMLSNMFVTLLFSYLASLIFNRGLIPGRWDVFKVKTDKPPKKPTLVSNGVTKTDEKE
HGVDEIELMLTANQTD
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcaacgtcccgggactagtggtgatggtgctcttctacctgctggtgctgggc
accggtatctgggcctccgtcaagagcaagcggctgcagaagagcagccagggggaccaa
acagagatcacactgctgggcaacagggggatcagcctggtggtgggagtcttcacgatg
acagctacatttgttggagggggcttcattatgggtctgactgaggtagtgtacactccg
actatgggactgacgtgggctgtcatgccagcatcagcagccctgtctttcattgttggt
ggacttttcttcgcaaagacaatgagagacagaagatatgtgaccatgatggacccgttc
cagatcaaatatggaaatgcaataagtgcagttctgtcactggcattgctgatatccgac
atcatctgggttacaggaactctaattggcttaggtgcaacaatggccgtgatcctggat
ttgccctattctgtttgcatttggatctctgcctcagtagccatcatctacacactgctg
ggaggcctctactcggtcgcatacacagacatcatacagctaactctcatattcctcagt
ttgtggctatgtgtccccttcatctttatgaacacccattcaactgacatcaccaaaacg
gctttcaattttacctaccaggccccctgggttggttcggtggataaagaaagagcatgg
aggtggatcgataatttcctaatattgtcattaggtaaccttggataccaggacttccac
cagaggacgctgtcggctgcctcatcagctacagcccgtatcacctgttttgtggcagct
cctctcatctttatactcgggatcccaggcgtgctgatcggagcagtggcagcatcaaca
gattggaacacaaccgcgtacggctccccaagcccatacgagcgcggcgaggccagtcag
gtgctgcccattgttctgcagcacctcaccccacaatacatctccatcatcggcatcgga
gcgatagccgctgcagtgatgtcctcgacagactctgctttattgtccgccgcctccatc
ttcacgtccaacatctataggaacatgatgaggaccacggcgtcggatagggagctccag
tgggtgatccgtgccacggtggtgttggcgggcctggccggcaccgcgctcaccttcgta
cacaacagcgttatgtttttctggatcctgggctcaggcataacctacaccgtcatgttc
ccccaactcgtctgtgtcctgttctttcacatctccaacggctatggctccatcgtgggc
ctggttgtcacagtggtcatgagagtgctgagcggcgagccaacgataggactgcccatt
gttctccacctcccgggttgcacgcttgagaatggcgtatacgtccagcacgctcctgtt
cagacgatctgcatgttgtccaacatgtttgttactttgttgttctcctacctagcctca
ctgatattcaacagaggactgattccagggaggtgggacgtatttaaggtgaaaaccgac
aaaccgccaaagaaaccaacgttagtgagcaacggggtcaccaaaacagacgagaaggaa
cacggagttgatgagattgaattaatgttaaccgcaaatcagactgattga
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