Pungitius pungitius (ninespine stickleback): 119211346
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Entry
119211346 CDS
T07626
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119211346 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119211346 (trip12)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119211346 (trip12)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
HECT type E3
119211346 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
119211346
NCBI-ProteinID:
XP_037318081
LinkDB
All DBs
Position
3:complement(5807546..5829437)
Genome browser
AA seq
2077 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVAGRLQSEQVKNKVNSPPESKRPNSKASKAT
ASSTAGQSRGHSSRRSGLTLSVASFVLQDEPEAAGTSEQERPGHQSKSEGTRGLKRSEAP
DLISTFGPTPAKKSKSVPPPRDNTSETKKVAAKSKKRPLASEVPALSGRGQSKKSGAAGA
SPIQKRKKADSLPGLSSTAGSLPNRTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSAST
SSSSSTTGPSSATTQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTASSSKFEWA
ARFNPKVNLPKPKLSLPGSSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESEDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFD
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMFS
LMCSNCPCLAVQLMKQIRLISRPINEESQVVVTPYDIAETLRFLLCGASNGSCQEQIELV
PRSPQELYELTSLICELMPCLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNR
IDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGS
HQEVRREDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIFFAD
AELLKDVLRNHSVSSHIASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQV
KNLSESESFLVTSPPKACPSSTASVCTTTISTASTTSANNATPDLGSPSFQHSMDDSLDL
SPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTSTQSPKSSFLASLNPKTW
GKLGAQTNNANSEPSRTAGVSGLARAPPKDSISNNRDKIKAWIKEQASKFVERYFNSENV
DGSNPALNVLQRLCTATEQLNLQVDGGLECLVEISSIVSESDVSSFEIQHSGLVKQLLVY
LTSNTDRDLLSRDVRLKRFLHVFSSCPVQGMEPLGRLDPTENGPYLAMVHKMNSCLSQME
QFPVKVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALV
QAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPY
NMTVYQAVRQYSLQAEEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGGK
RGRAQTAPTKTSPRNAKKQDELWHDGVCPSVVNPLETYLTSEPPETITFDDPSLEVNLLL
RVLHSISRYWFYLYDNAVCKEIMPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELG
KTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINR
DELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEV
TLANPKGSQEGTKYMFSSKGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLD
LPLGLPFYKWMLRHEASISSHDLVNIDPGVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQ
GLESLNMNGCSVEDLGLDFTLPGLPNIELKKGGKDFPVTIYNLEEYLRLVVYWTLNEGVS
RQFESFREGFESVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRA
VRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPS
VMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacagtcgcaggaaggttgcagtcagagcaggtaaaa
aataaagtgaattctccacctgaaagtaaaagacctaattctaaagcttccaaagccaca
gccagctccaccgctggccagtccagaggccacagctcaagaagaagcggtcttactctt
tccgtggcttcatttgtgttgcaagacgagccagaggctgcagggacatctgagcaagaa
cgaccaggccaccagtcaaagagcgagggcactcgcgggctgaagcgaagcgaagctcct
gatctaatcagtaccttcggaccgacccctgccaagaagtccaaatcggtcccaccaccc
agagacaatacctcagagaccaagaaagttgcagcaaagtccaagaagagaccacttgct
tcagaagtacctgcattgtcaggtcgcggccagagcaagaagagcggggccgctggggcc
tcaccgatccagaaacggaagaaagcagactccctccccggtctaagtagcaccgctggg
tccctccccaatcgtaccgagggcagaactgcaaaacccaccaagctggcgtctaaatca
gccgcctcagccaaagctgggtgtagcaacgtgacggactcctcctcctctgcctccacc
tcttcctcttcctcaaccacagggcccagcagcgccacaacgcagggcgcccgagtcaaa
cagggaaaagatcagaccaaggcacggcgctctcgctctgcctcaagcccctccccccgc
cgcagcacccgagacaaggagcaggccaaaaccgccagctcctcaaagttcgagtgggca
gcgcggttcaaccccaaagtcaacctgccaaaacccaaactgtccttgcccggatcctcc
aaaactgagacctccaaacctgggccttcgggattacaagctaaactagcaagtttgagg
aagtccactaagaagcgaagcgagtctcctccagcagagctccccagctttcggcggagc
acacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctgggc
aagcgcggggcagccgacgctcgccgccaggagaaaatggccgactccgacaacaaccag
gacggggccaactcgtcggccgctcgcaccgacgaggcatcacaaggggcttcagcttca
agctccgttgctggagcagtgggcatgaccacctctggagagagtgagtcggaggactct
gaaatgggaaggctccaagccctgctggaggccaggggtctccccccacatctctttggg
cccctgggcccccggatgtcccagctgtttcacaggaccatcggcagcggagcgagctcc
aaggcgcagcagcttctgcagggcctgcaggccaccggagacgagtcccagcagctccaa
gcggccatcgagatgtgccagctgctggtgatgggcaacgaggagacgcttggtggattt
cctgtcaagagcgtggtgcctgctttgattacgctgttacaaatggagcataactttgac
attatgaaccacgcctctcgtgcactcacctatatgatggaggcgctgcctcgatcctct
gctgtggtggtcgatgccattcctgtcttcctggagaagcttcaagtgatccaattcatt
gacgtagcagagcaggccctgacagccctggagatgttgtcaaggcgacacagcaaagcc
atattgcaggctggtgggctcgctgactgcctcctctacctggagttctttagcatcaat
gctcagaggaacgctttggccatcgcagccaactgctgccagagcataactccagacgag
ttccactttgttgctgattctctgcccctgttgactcagagactcacacaccaggataaa
aaatccgtagaaagcacttgcctctgtttcgccagactggtggacaactttcagcacgag
gagaacctgctgcaggaggtggcgtcgcgggacctgttgaccaacattcagcagctgctg
gtggtgacccctcctgtgctcagctcggggatgtttatcatggttgtgcgcatgttttcc
ttgatgtgctccaactgcccctgcctggcagtccagcttatgaaacagatccgattgatc
tcgcggccaatcaatgaagaatcacaagtggttgtaactccttatgacatagcagaaact
ctgcgtttcctcctgtgtggggcctcaaatggcagctgccaggaacagattgaactggta
ccccgcagcccccaggagctctacgaactgacctccctcatatgcgagctgatgccctgc
ctgcccagagagggcatctttgccgttgatgtaatgctgaagaagggcagtgcccagacg
acagagggagccatctggcagtggagggatgaccgtggactgtggcatccatacaaccgc
attgacagccgcattattgagacagcacaccagaacggggaggatgagatcagcttgtca
accctgggccgtgtgtacacaattgactttaactctatgcagcagattaatgaagacaca
ggaactgcacgtggtatccagaggaaacccaatcctcttgccaaccctaatacagggagt
caccaggaggtccgtcgagaggacgcacgcgcccagttgatgaaggaggaccctgagttg
gcaaagtgctttatcaaaactctgtttggggtcttgtatgaggtgtacagctcctcggcc
gggcctgcggtcagacacaagtgccttagagccatcctcaggatcatcttctttgctgat
gcagagctgctgaaggatgtgctgaggaaccattctgtgtccagtcacattgcctccatg
ctatccagccaggacctgaagattgtagtgggttctctgcagatggctgagatcctcatg
cagaagctgcctgatgtcttcagtgtctatttcagaagagaaggtgtgatgcaccaggtg
aagaacctgtcagaatctgagagctttcttgtcactagtcccccaaaggcttgccccagt
agtactgccagtgtgtgcactaccaccatcagcactgcgtccaccacgtctgctaacaat
gcaactcctgacctgggctcccccagcttccagcacagcatggatgactcactggacctc
agcccccaggggcggttaagtgatgtcctaaagaggaaacggcttcctaaaagagggccc
aggaggccaaaatactctcccccaagagatgatgacaaagtagacaatcaggccaagagc
cctaccagtactcagtcacccaaatcgtccttcctggccagtcttaaccccaagacctgg
gggaagctgggtgcccagaccaacaatgccaactctgagccctcacgcacagcaggagtg
agtggcctggcccgggccccccccaaagactccatttcaaacaacagagacaaaataaaa
gcctggatcaaagagcaggcgagtaagtttgtggagcgctacttcaactctgaaaatgtg
gacggcagcaaccctgcgctgaatgtactccagagactttgcacagccactgagcagctc
aacctgcaggtcgacggtggtttggagtgcctggtggagatctccagtattgtatcagaa
tctgatgtgtcgtcttttgagatccagcacagcgggctggtgaagcagctcctggtctac
ctgacctccaacaccgacagggacttgctgagccgcgatgtgcggctcaagcggttcctc
catgtgttctccagctgtccggttcaaggaatggagcctctaggtcgtctggaccccaca
gagaatggcccgtacctggcaatggtgcacaaaatgaacagctgcctgagccaaatggag
cagttccctgtcaaagtgcacgatttccccagtggcaacggcaatggcagcaggggctct
caggcactgaagttcttcaacacacatcagctcaagtgtcagctgcagagacacccggac
tgcacgaatgttaaacagtggaaaggcggcccggtgaagattgacccgctggccctggtg
caggccattgagagatatctcgttgtcagaggatacggccgaatcagagaagaggatgaa
gacagcgacgacgacggttcagacgatgaaatcgacgagtctctggcggcccagttcctg
aattccgggagtgtgcgtcacagactacaattctacatcggtgaccacctgctgccgtac
aacatgaccgtgtaccaggccgtccggcagtacagtctccaagcagaagaagaaagggag
tcgacggacgacgaggcgaacccacttggccgagcgggcatctggaccaaaacgcacaca
atatggtataagcccgtgagggaggacgaggacggcagtaaagacgctgtgggtggaaag
aggggtcgggcccagaccgctccaaccaaaacctcgccacgcaacgccaagaagcaggat
gagctgtggcacgacggcgtgtgtcccagtgtggtcaaccccctagagacatacctcact
tcagagcctccagagaccataacctttgatgacccctctttggaggtcaacctgctgctg
agggtcttgcactcaatcagtagatactggttctacttgtatgataatgctgtgtgtaag
gaaatcatgcccaccagtgagttcatcaacagtaagctgacagccaaagcaaaccgtcag
ctccaagacccgctggtcattatgacggggaacatccccacttggctcatagagctcggg
aagacttgtccgttcttcttcccctttgacacccggcagatgttgttctacgtaaccgcc
ttcgatcgtgaccgagccatgcagcgcttactggacacaaaccctgagatcaaccaatcg
gattctcaggatagcagagtcgcaccgcgtcttgacaggaagaagaggacgataaaccgc
gacgagctgctgaaacaggccgagtccgtgatgcaggacctcggcagctccagggcgatg
ttggagattcagtacgagaacgaggtgggcacaggtctcgggcccaccctggagttctac
gctctggtgtctcaggagctccagcgggccgacctcggcctgtggaggggtgaagaggtc
actctggccaatccgaaaggaagccaagagggaacgaagtacatgttcagctccaaagga
ctgtttgctgttcccttcggaaggaccaccaaaccagcgcacatagccaaaatcaaaatg
aagttccgtttcttaggaaagctaatggccaaagccattatggacttcagattgctggac
ctgcccctggggctgccgttctataagtggatgctacggcacgaggcgtccataagctcc
catgacctggtgaacattgaccccggtgtggccaagtccatccagcacctggaggatatc
atccgccagaagaagaggttggaacaggaccgttcacagacgagggagaccctacagcag
ggcctggagagcctaaacatgaatggctgctccgtggaggacctcggtttggacttcacc
cttccagggctccccaacattgagctgaaaaagggtggcaaggactttcccgtcacaatc
tacaacctggaggagtacctcaggctggtggtgtactggactctaaatgaaggagtgtcc
aggcaatttgagtcgtttagggaagggtttgaatctgtcttccccttgcatcacctgcag
tatttctatccagaggagcttgaccagttgctgtgtggtagtaaatctgagacgtgggac
gtgaagacgttgatggagtgctgtcgaccggaccacggctacacacatgacagccgtgcc
gtgcggttcctgtttgaggtgctgagcagctttgatgccgagcagcagagactctttctg
cagtttgtcacaggaagccccagactgcctgttggtggtttccggagcctgaacccccct
ctgacaattgtgaggaagacgttcgagtcgacagagaacccggatgacttcctcccctcg
gtcatgacctgtgtcaactacctgaagctgcctgactactccagcatcgagataatgcga
gagaaactgttgatcgcggcccgcgagggccagcagtcgttccacctttcctga
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integrated database retrieval system
