Pungitius pungitius (ninespine stickleback): 119211443
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Entry
119211443 CDS
T07626
Name
(RefSeq) TBC1 domain family member 9B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119211443
Membrane trafficking [BR:
ppug04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119211443
Endosome - Golgi transport
Rab GTPases and associated proteins
119211443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
119211443
NCBI-ProteinID:
XP_037318247
LinkDB
All DBs
Position
2:complement(13068551..13080737)
Genome browser
AA seq
1206 aa
AA seq
DB search
MWIQPEEVLMAGALWVSERANPFFILQRRKGHGRGGGLSGLLVGTLDVVLDSSARVAPYR
ILLQTADSQIYWNVACGSSRKEITEHWEWLESNLLQTISIFDNDEDVTTFVKGKISGIIA
EENRLKQGEDQEEDCGKFREAELKMRRLFAMPEEEKLVNYYSCSYWKGRVPRQGWLYLSV
NHLCFYSFLMGKEVILVVQWTEVTQLEKNANLVFPESVCVSTRHTEHFFSMFLNINDTFK
LMEQLANIAMRQLLDNEAFAADLTLPKPCKTLKNVSALKRDLDARAKNERYRTMFRLTQD
ERLDGHTDCTLWTPFAKMHVVGQLFISNNYICFNSREEGLCQLIIPLREVSIAEKADSSS
VLPCPVSISTKNKMNFLFANLKDRDFLVQRISDFLQRTPDSSRGDTSPLCPVGPSASSMS
LGTESAHKMPHYHPGLSTASQGLLQLYHQDAQEDLGPKAMKEKMKEEAWNIHFSEFGRGV
CMYRTSRTRELVLNGIPEALRGELWLLFSGAQNEMATHPGYYGDLVEQAMGLCSLATEEI
ERDLHRSMPEHRAFQNETGIAALRRVLTAYAHRNPGIGYCQAMNIVTSVLLLYCPEEEAF
WLLVALCERMLPDYYNTRVVGALVDQGVFEELTRAFLPLLYEHMQELGVISTISLSWFLT
LFLSVMPFDSAVLLVDCFFYEGIKVTFQVALAVLYDNMEALLSCSDEGEAMTILGRYLDN
VVNRQTVAPPIPHLHALLTSGDDPPPEIDIFDLIKSSYERFGSLHSDVIEQMRFKQRLKV
IQSLEDTAKRSVVRAMMTESAFSIEELEELYCLFKSKHMTSCYWGSSSSAAERHDPSLPY
LEQYRIDPAQFTQLFTALSPWVCGGHTSTLSARLFRLLDQNKDGLVNFKEFITGLSGMYH
GDMTEKLKLLYKLHLPPALCPEEAESALEATHFFTEEEPRESSFLCDVEMLGQPEMTPGE
AGKDGGGDSEEKKDEKVKDYRYYLRMWAKEKEPKAETIKDLPRMNQEQFIDLCKTLYNMF
SEEPLEQELYHSIATVASLLLRIGEVGKKFNNNGGGRKANTPVAQAPPNEPQREEGHGEG
GSGESQVCLALADAQLEPAALDEESKDDVSLSSYSVVSSSSLQCDDITDNAVLIGDGRQR
RGSVLDVDWSITFEQVLASLLTEPPLVDYFEKKRDFQNKMAACKAQRGVERQTSSASDHE
LTQHST
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccaaccggaggaggttctaatggccggagctctgtgggtctctgagcgggcc
aacccgttctttatcctgcagaggaggaagggacacggccgaggggggggactgtctggt
ttactggttggaactctggatgtggtgctggactccagcgccagggtggctccttacagg
atcctgctgcagactgcggactctcagatctactggaacgtggcttgtggctcatccagg
aaagagatcactgagcactgggaatggctggagtccaacctcctccagacaatctccatc
tttgacaacgatgaagacgttaccacatttgtcaaaggaaaaatctctggcatcattgcg
gaggagaaccgcctgaagcagggtgaggaccaggaggaggattgtgggaagtttcgagag
gcagagctgaagatgaggaggctgtttgcgatgccggaagaggagaagctggtgaattat
tactcctgcagctactggaagggccgagtgccgcgccagggctggctctacctgtccgtc
aaccacctgtgtttctactctttcctaatgggcaaggaggtgatcttggtggtgcagtgg
acggaggtgacccagctggagaagaatgccaatctggtgtttccagagagtgtttgtgtc
agcacgcgtcacaccgagcatttcttttccatgttcctgaacatcaacgacaccttcaag
ctgatggagcagctggccaacatcgccatgcgccagctcctcgacaacgaggcctttgct
gccgacctgacgctgcccaaaccctgcaagacgctgaagaatgtgtccgcactcaaaagg
gatctggacgcgagggcgaagaatgagcgctatcgaacgatgttccgtctgacccaggac
gagcgtctggacggacacacggactgcacactgtggacgccgtttgctaagatgcatgtg
gtgggacagctcttcatctccaacaactacatctgtttcaacagcagagaagaaggcttg
tgtcagctcatcatccctctcagagaggtgtccattgcggagaaggcggacagcagcagt
gtgctaccgtgtcccgtctcgatcagcactaagaacaagatgaacttcctgtttgccaac
ctcaaagacagagacttcctggtccagcgcatctctgacttcctgcagcgcacaccggac
agctcgcgaggcgatacgagcccgctgtgtcccgtcggtccctctgcgtcatccatgtcc
ttggggactgagtctgcccacaagatgcctcactaccaccctggtctgtccacagccagc
cagggtttactgcagctctaccaccaggacgcccaggaggacctggggcccaaagccatg
aaggagaagatgaaggaggaggcgtggaacatacatttctcagagttcggtcgaggtgtc
tgcatgtaccgaacctcgagaaccagagagctggtcctcaacgggatcccagaggccctg
cgaggagagctgtggctgttgttctcaggagcacagaacgagatggccacccaccctggc
tactacggtgacctggtggagcaggccatggggctgtgttcattggccaccgaggagatt
gagcgtgaccttcaccgctcaatgccagagcaccgagccttccagaatgagacgggcatt
gctgcactgcgccgcgtcctcaccgcctacgcccaccgcaaccccggcatcgggtactgt
caggcgatgaacattgtcacctccgtcctgttgctctactgcccagaggaggaggccttc
tggctgctggtggctctgtgtgagaggatgctgcccgactactacaacaccagggtggtg
ggtgctctggtggatcagggagtgtttgaggagctgactcgagccttcctccctcttctg
tatgaacacatgcaggagctgggtgtgatttccaccatcagcctgtcctggttcctcaca
ctcttcctgtctgtgatgccctttgacagcgccgtcctattagtcgattgcttcttctat
gaaggaatcaaggtcaccttccaggtggcgctggctgtgctctatgacaacatggaagcc
ctgctgtcctgcagcgacgagggagaagccatgaccatcctgggcaggtacctggataat
gttgtaaacagacagactgtggctcctcccattcctcacctgcatgccctactgacgagt
ggagacgatcctccacctgagattgacatctttgatctcatcaagtcgtcctatgagagg
tttggcagcttgcactctgatgtcattgaacagatgaggtttaaacagaggttaaaggtc
atccagtcactggaggacacggccaagaggagcgtggttagggcgatgatgacggagtct
gccttcagtatcgaggagctggaggagctctactgtctctttaagtccaaacacatgacg
agctgttactggggctccagcagctctgcagccgagcgccatgatcccagccttccttac
ctggagcagtaccgcattgacccggctcagttcacccagctgttcacggcactcagtccc
tgggtgtgtggaggtcacacctccaccctgtcagcccgcctcttcagactgttggaccaa
aacaaggacggactggtcaacttcaaagagttcatcactggactcagtgggatgtaccac
ggagacatgaccgagaaactcaaactgctgtacaagctccacctccctccagcgctgtgt
cctgaagaggcggagtctgctctggaggcaacacacttcttcactgaggaggagccacga
gaatcttccttcttatgtgatgtggagatgttggggcaaccggaaatgacgccaggtgag
gcagggaaggatgggggaggagacagcgaagagaagaaagacgagaaggtgaaggactac
cggtactacctgagaatgtgggctaaagagaaggaacccaaggccgagactatcaaagac
ctgcccaggatgaaccaggagcagttcatcgacctgtgtaaaacgctgtacaacatgttc
agtgaggagcctctggagcaggagctgtatcactccatcgccactgtggccagcctgctg
ctgcgcataggggaggtcggcaagaagttcaacaacaacggcggcggcaggaaggccaac
acgcctgtcgctcaggctccgcccaatgagcctcagagggaggagggtcatggtgagggg
gggtcaggggagtcccaggtgtgcctggctttggctgacgctcagctggagccggcggct
ctggacgaggaatccaaagacgacgtgtcgctgtcgtcgtattcggtggttagctccagc
tcgctgcagtgtgatgacatcactgacaacgccgtgcttattggtgacgggaggcagagg
cggggaagcgtgctggatgtcgattggtcaatcacctttgaacaggtgctggcatcgctg
ctgacggagccaccactagtggactactttgagaagaagagggacttccagaacaagatg
gcagcctgtaaggcacagaggggagtagagcgtcaaacaagctccgcctccgaccacgaa
ctcactcagcattccacctga
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