Pungitius pungitius (ninespine stickleback): 119211453
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Entry
119211453 CDS
T07626
Symbol
rnf130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119211453 (rnf130)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119211453 (rnf130)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119211453 (rnf130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
PspB
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
119211453
NCBI-ProteinID:
XP_037318270
LinkDB
All DBs
Position
2:complement(13080997..13092187)
Genome browser
AA seq
415 aa
AA seq
DB search
MMSPRWTRMPASLFLVLVLTRSVAAARSDRNVVSEEYVGATVNATVMDGRGNVLHMMSSD
EGTYGQNSPKVDTRGLVITPAQHHGVVDRQGCDPGTRFLVPPRNAHWVALLQRGNCTFKE
KILKAAAYNATAVVIYNNSTDKTVKMGHEGTGDTVAVMITEAYGKEILAHLERNLTVVLS
VVVGQRSPTKNINRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTSARDRSQRRLGDAA
KKAIGKLTTRTVKKGDKETDPDFNHCAVCIEAYQLNDVVRILPCKHVFHKVCVDPWLNEH
CTCPMCKLNILKALGIMTTLPCVDSVVLDVERLGIAQASGGQRVTLGESNQPSISLEPLS
LPHPEAPPRTPADITVAVTSGGHFFNRNSMSPRSLVCEMELPDIQASLDLYEDKS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcccccaggtggacccgtatgcccgcctcgttgttcctggtcctggttctgacc
cgctcggtggcagcggcccgctctgacagaaacgtcgtgtcagaggagtatgtgggcgca
acggtgaacgccacggtgatggacgggcggggaaacgttctccacatgatgagcagcgac
gaggggacatacggacaaaactcacctaaggtggacaccaggggacttgtcatcacacct
gcccagcaccacggagtggtggaccggcagggctgcgaccccggaacccgtttcctggtc
cctcctcggaacgctcactgggtggcgctgctgcagagaggaaattgcacctttaaggag
aagattctgaaggcggccgcctacaacgccacagcagtagtcatttacaacaactccacc
gacaagactgtcaagatgggacacgaaggtactggtgacacggtggccgtgatgatcaca
gaggcgtatggtaaagaaatcctggcacacctggagaggaacctgactgttgtgctctct
gtggtggtgggtcaacggagtcccaccaaaaacatcaaccgaggatcgctggtgtttgtc
tccatctccttcatcgtcctgatgataatttcatcagcctggctcattttctatttcatc
cagaagatccgctacaccagtgcccgtgaccgcagccagcgtcgccttggtgacgcagcg
aagaaagccatcgggaagttgacaacaaggacggtgaaaaaaggagacaaggaaaccgat
ccggacttcaaccactgtgcggtgtgtattgaagcgtaccagcttaacgatgtggttcgc
attctgccctgcaaacatgtcttccacaaggtgtgtgtggacccctggctcaacgaacac
tgcacctgtcccatgtgcaaactcaacatccttaaagctcttggcatcatgaccactctc
ccctgcgtggacagcgtggtgttggatgtggagcgtctgggtatcgctcaggcgtctgga
ggccaaagggtgacgctgggcgaaagcaaccagccgtccattagcctagagccactgagc
ctgccccaccccgaggcccctcccagaacgcctgctgacatcaccgttgctgtgaccagt
ggcggtcacttttttaacaggaactcaatgtctcctcgcagtttagtctgcgagatggag
ctaccagacatccaggcctcgctagacctctatgaagacaagtcctga
DBGET
integrated database retrieval system
