Pungitius pungitius (ninespine stickleback): 119211479
Help
Entry
119211479 CDS
T07626
Name
(RefSeq) double-stranded RNA-specific editase 1 isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119211479
Spliceosome [BR:
ppug03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119211479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
119211479
NCBI-ProteinID:
XP_037318326
LinkDB
All DBs
Position
3:complement(21981375..22037202)
Genome browser
AA seq
746 aa
AA seq
DB search
MALMLDSSLCCLIRRRGKRRRKKRSERRGREGDRLLHNQQRLLTIEGSEAKSMSSCSTDV
KENRNLDNLFSKEGVAAATAQPPNGSGGGGRKRPLEEGNNGHAHSKYRPKKRKKVPGPIL
PKNALMQLNEIKPGLQYKILSQTGPVHAPVFVMTVEVNGQLFEGSGPTKKKAKLNAAEKA
LRSFVQFPNASEAHMAMGRTLSVHTDFTSDQADFPDMLFNAFETSIPADDPFYLASISNG
SFNSLGIEYPLLPSPVPNLGQAPLPLVPPPFISPTSGKNPVMILNELRPGLKYDFVSESG
ESHAKNFVMSVSVDAQSFQGSGRNKKLAKARAAQAALSALFNMQLDQAPSSQPIPREGLQ
LHLPQVLADSVSRLVVDKFSELTDNFSSPHSRRKVLAGVVMTTGTDVKDAEVICVSTGTK
CINGEYMSDRGLALNDCHAEIVARRSLIRYLYSQLEYFLSNHEEEQQTSIFTRCENRQGF
RLKENVQFHLYISTSPCGDARIFSPHEAGMEDQGDRHPNRKARGQLRTKIESGEGTIPVR
STNTIQTWDGVLQGERLLTMSCSDKIARWNVVGLQGSLMSYFTEAIYFSSIILGSLYHAD
HLSRAMYQRITEIEDLPQSFSLNRPLLSGISNSEARQPGKAPNFSVNWTVGDQGLELINA
TTGKDDLGRPSRLCKHTLYSRWMRLHCKLSSTLRIKTVRPSSYHDAKQAAVEYHSAKHAL
FRAFHKAGLGAWVKKPIEQDQFALGT
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggctctgatgctggacagctctctgtgctgcctaatccgccgcaggggcaaaaggagg
aggaagaaacgctccgaacgcagaggccgagagggagatcggctacttcataaccaacag
agactgctcaccatagaagggagcgaagcaaaaagcatgagttcatgcagcacagatgtt
aaggaaaatcggaacttggacaacctcttctccaaagagggggttgcagctgcgactgct
caaccccccaatgggagtggtgggggtgggaggaagcgtcctttagaggagggcaataat
gggcatgcgcattccaagtacaggcccaagaagcgtaagaaagtccccgggcccattctg
cctaagaatgccctcatgcagctcaatgagatcaagccagggctgcagtacaaaatactc
tctcagaccgggcccgtccatgcacccgtcttcgtgatgactgtggaggtcaacgggcag
ctcttcgagggttccggtcctaccaagaaaaaggccaagctgaatgcagcagagaaggcc
ctgcgctccttcgtccagttccccaatgcgtccgaagcccacatggccatgggccggact
ctgtctgtgcacacggacttcacctcggaccaggctgactttccagacatgctctttaat
gcctttgagacatccattcctgccgacgaccctttttaccttgcatccatcagtaatggt
tccttcaactcattgggaatagagtacccgttgctgccctctcctgtccccaacctcggg
caggccccgttacctctagtccccccccccttcatctcccctacaagcggcaagaatcca
gtcatgatcctcaatgagttgcggccaggcctcaagtatgactttgtgtccgagagcggg
gagagccatgccaagaactttgtaatgtcagtgtcagtggatgctcagagcttccagggt
tctggacgaaacaagaagctggccaaggcccgcgctgcccaggctgctctgtctgctctg
tttaacatgcagctggatcaggctccatcaagtcagccaatacccagagaaggactgcag
cttcacctgccacaggtcctggcggactctgtctctcgcctggtcgtcgacaagttcagc
gaactcacggacaacttctcgtctccgcactcgagacggaaagtattggcaggtgtcgtc
atgacaacaggtacagatgtgaaggatgctgaggtaatctgcgtgtccacaggaacaaag
tgcatcaatggtgaatacatgagcgatagaggtttggccctcaatgactgccatgctgag
atagtggcgcgccgctcgctcatcaggtacctatattcccagctggagtatttcctcagt
aatcacgaagaggagcagcagacatctatcttcaccaggtgtgaaaacagacaagggttc
aggctgaaggaaaatgtccagttccacctctacatcagtacatccccctgtggagacgcc
cgcatattttctccccatgaggctggaatggaggatcagggggacagacacccgaacaga
aaggcccgcggacagctccgcactaaaatagagtccggtgaaggaaccatcccggttcgc
tccaccaacaccatccagacgtgggatggagttcttcagggcgagaggctgctaaccatg
tcctgcagtgacaagatagccaggtggaatgtagtcggactccaaggctctttgatgagc
tacttcactgaggccatctacttctccagcatcatcctgggcagcctgtaccatgctgac
cacctctccagagccatgtaccagaggattaccgagattgaggacctgccccagtccttc
agcttgaataggccactgctcagtggaataagcaactcagaggctcgtcagccggggaaa
gctcccaacttcagcgtcaactggacggtgggagaccaagggttagagttaatcaacgcc
accacagggaaggatgacctgggtcgaccctccaggctctgcaaacacactctgtacagc
cgctggatgcgcctgcactgcaagctatcctccaccctgcggatcaaaacggtgaggccc
agcagctaccatgatgccaagcaggcagcggtggagtaccacagcgccaagcacgcgctc
tttagagccttccacaaagccggactgggcgcctgggtgaagaaaccgattgagcaggat
caatttgccctgggcacctga
DBGET
integrated database retrieval system
