Pungitius pungitius (ninespine stickleback): 119211508
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Entry
119211508 CDS
T07626
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1-like isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119211508
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
119211508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
FXa_inhibition
hEGF
EGF_3
Plasmod_Pvs28
EGF_Teneurin
EGF_2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
119211508
NCBI-ProteinID:
XP_062416939
LinkDB
All DBs
Position
3:complement(763990..793748)
Genome browser
AA seq
1796 aa
AA seq
DB search
MMTMCCRPRVCASRCCVGWTFSPGTWRCNKPRCIFRCHGASFCHQSNRCVCPRGFHGYRC
ESSSLTGGPLEPASRNTRVIGAPPGHVATTTTARPGPGASDPNPPETFNVQEDTEILNTG
EEKGDSSATSPQAGQRAERTETQDSNNLQEKEEEIRAGPTGLKTDPSPSQTASPHLRQTS
PPEDQRVLRQETSTSSRIPNPESRSGTREQKSEDVAGTPEKKKKTRGAETQSLSLREAQA
VMLRKTVSLRGRGDKMAALLMKHIEKERKKVLTVTSSPDSTSSSSSSSTGGTSAKTFYTK
KGRYSLRVAAAGAEGQTVSGGRGVERLQVMFTPTVCKVRCSQGRCVNYCQHGNVTTLYSG
IEGGGGGGGRRESSHGPGFRVFLCPMLCKNGGVCLQKDRCLCPQGFSGKFCQVPIASSST
NDIVKPALLTAMEANQELTHSEFLLPLRPSQETGVSGAPGPSMMQVRAQHPPQTRAILHQ
VQTVSRSSPALRTLSSGSAGAPAPAGVQAQTVRGGGTISQQAGFKYCFREVKEGQCSSPL
PGLRSKDICCQGIGKAWGTTECVLCPDTTGQSNSSCPAGFERANGTQCVDVNECLQPGLC
ENGICVNTRGRYSCVCRTGFILDASHGICISQSVISEEKGQCHRLLGPGRGPTSCSLPIL
RSITKQICCCSRVGRAWGPDCQRCPHFGSVAFKETCPAGPGYHYSASALQFNQRATEQLG
ARGASLVTPGNHGPGSGSGTGGSSSSGSSTNGSSRSQQRGTADESKTSSGGTSRPSPALF
HPPRQDDSTSTATGDKVQSAGRPVTQQNGPHLARPFTPEPGPRPPSGGSQGGGLSSPAST
REDPLPPPARPLSPERPTTTPQARVQMLRGVCESTPGVCGPGVCVQQPGGTHTCVCDEGH
QLDSQRTFCRDVNECVQSAGVCAGGECVNTLGSFKCVCSTGYKSNSQQAGCQDVDECEDP
LQCPGQQCINTQGSYRCVSCRHGYGLLNGVCTDVDECQQSPCSSGRCENTPGSYHCVCRH
GYRLQNNTCTDVDECVAVGVCEAERVCVNTVGSFRCDCAPGYQTSGPGRKCRDVNECLQE
DSCSRGVCVNSPGSFSCLCPLGFSPSDNRTSCIDVDECVESSLCVDGRCVNTEGSFQCQC
ETGFTSNPEGTTCLDVDECVQSGGSVCVMSQRCENTIGSYRCITSCQPGYQVTRTGSCED
LNECSNQTLCGQHAFCQNVVGTFLCVCDQGFTSADGGGTCEDEDECVSRPDVCGSARCEN
VEGSFMCECDQPGHEFDTSSRRCVNADQQAERLSGSSSFHLSVLGPPPLLPPLPAARPGE
LRECYYNLAEAGTCSLLATNTSQQECCCTVGEGWGLGCQYHGCPPTDSVHFLSLCPSGRG
YVTTGPGAFSYTDVDECKRFHPEVCKNGVCVNNIPGYSCYCPSGYVYNHTLLECVDHDEC
EEESCVGGACVNTVGSYYCSCAPPLQLDDTQRHCVNSSHLPGDENLSLCWQHVTADLVCQ
SPLLGAQVTFMDCCCLYGEGWGMECALCPPTDSDDYASLCTSFLPPLFPESFSDSGPEPG
VRPGGRGGVRESSPPYFPPYSPDSFPPAVAPDYEDYSPAGGSSSVFRGRTPVSYQGPDFR
PPSFRPPPDPRAERAFGARPPPPSRPDGPPISLAPLPGAPYQVEQEEEGEEEGWWRQAPP
FPPFTERREGGAPRRLYERRYESYAGLSAAEDCGILHGCENGRCIRVAEGYTCDCYQGYG
LDMTSMTCTDLNECEASVPLDFPCVNARCVNTAGSFRCVCRRGYVMSRRPNHCVAA
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgatgactatgtgctgcaggcctcgtgtgtgtgcaagtcgctgttgtgttggatggact
ttctcacctgggacctggcggtgcaacaagccccggtgtattttccgttgtcatggcgcc
tcattttgccaccagtccaaccgctgtgtgtgtccacgcggtttccatggttaccgctgt
gagtcctcctcgctgacaggcggccctctggagccggcctcccgaaatactagggtcatc
ggcgctccccctggtcacgttgctacgacaacaaccgccagacccggaccaggagcttca
gacccgaatccaccggagaccttcaatgtccaagaggacacagagatcctaaatactgga
gaagagaaaggagactcctccgcaacgtctcctcaggcaggacagagagccgagaggacg
gagacgcaggactccaacaacctccaggagaaggaggaggagatcagagccgggcctacc
gggctcaaaacagatccttccccgtctcagactgcgtctccacacctaagacagacgtct
cctccagaagaccaaagagtccttcgacaggagacatcaacgtcctctaggatcccaaat
ccagagtctaggtcggggacgagggagcagaagagtgaggatgttgctgggacaccagag
aagaagaagaagaccagaggagcagagacgcagtcgctgagtctaagggaggcccaggct
gtgatgctgaggaagactgtgtccctgagaggaagaggagacaagatggccgccctgctg
atgaagcacatcgagaaggagaggaaaaaggttctgaccgtgacctcatctcctgactcc
acctcctcttcctcctcatcttctacaggaggaaccagcgcaaagactttctacactaag
aagggccgatacagcctccgtgttgctgctgctggggctgaaggacagacggtgtcggga
ggcagaggtgtggagaggcttcaggtgatgttcacgcccaccgtctgcaaggtgcgctgc
agccagggccgatgtgtcaactactgccagcatggaaacgtgaccactctgtacagcggc
atcgagggaggaggaggaggaggaggaaggagagaaagctcccacggacctggcttcaga
gtgttcctctgccctatgctctgtaagaacggaggcgtctgtctgcagaaggaccgatgt
ctctgcccgcaaggcttcagcgggaagttctgccaggtccccatcgcctcctcctccacc
aacgacatcgtcaagccggcgctgctcaccgccatggaggccaatcaggagctgacacat
tcagagttccttctaccgctgagacccagccaggagaccggtgtctctggagctcctggg
ccgtccatgatgcaggtcagagcacagcaccccccccagaccagagcgatcctccaccag
gtgcaaacggtgtcccggtccagccccgccctgcggacgctctcctccgggtcggcgggc
gccccggctccagcgggggtccaggcccagacggtaagggggggcggcaccatcagccag
caggccggcttcaagtactgcttcagagaggtgaaagaggggcagtgcagctctcctctg
cccggtctgcggagcaaggacatctgctgccaaggcatcgggaaggcctggggtactaca
gagtgtgtactctgccctgatactacaggtcaaagcaacagcagctgcccggctggtttt
gagcgagccaatggaacgcagtgtgtagatgtgaatgagtgcctccagcccgggttgtgt
gaaaacgggatctgtgtgaacaccagagggcgctatagctgtgtgtgtagaacggggttc
atccttgacgcctcacatggaatctgcatctcccagagtgtgatctcggaggagaagggt
cagtgtcaccggctcctgggcccgggtcgcggtccgacctcgtgctcgctgcccatcctc
cgcagcatcaccaagcagatctgctgctgcagccgggtgggacgggcctgggggccggac
tgccagaggtgcccccacttcggttcagtggcctttaaggagacctgtccagccggtccc
gggtaccactactcggcttcggccctgcagttcaaccagagagccaccgagcagctgggg
gcccgaggagcttcgctggtgacccctggtaaccacggtcctggttctgggtccggtacc
ggcgggtccagttccagtggatccagtaccaacggctcctccaggtctcagcaaagaggg
acagccgatgaatcaaaaaccagttctggcgggaccagcagacctagtccagctctgttc
caccccccccgccaagacgactctacctcgacagccaccggggacaaagtgcagtctgca
gggagacccgtgacccagcagaacgggccccacctcgctcggccattcacaccggaaccg
ggacctcggcccccatccggcggtagtcaaggtgggggcctgtcctcccccgcgtccacc
agagaggaccccctccctcctccggcccgacccctcagcccagagcgccctacgacgacc
ccccaggcccgagtccagatgctgcgaggtgtgtgtgagagcacacctggtgtgtgtggc
ccaggtgtgtgtgtgcagcagccaggagggactcacacctgtgtgtgcgatgaaggacat
cagctcgactcccagcgcaccttctgccgagatgtgaacgagtgtgtgcagtcggcaggt
gtgtgtgctgggggagagtgtgtgaacactctgggaagcttcaagtgtgtttgttcaacc
ggatacaagagcaacagccagcaggccggttgtcaagacgtggacgagtgtgaggaccct
cttcagtgccctggtcagcagtgcatcaacactcagggttcttaccgctgtgtctcctgc
cgtcatggatacggactgctcaacggggtctgcacagacgtggacgagtgtcagcagtct
ccctgctccagcggccgctgtgagaacacacccgggagctaccactgcgtctgtcgccat
ggttacaggctgcagaacaacacctgcacagacgtggacgagtgtgttgctgttggtgtg
tgcgaggcagagcgtgtgtgtgtgaacaccgtcggctccttcaggtgcgactgtgcgccc
gggtatcaaacctctggcccggggaggaagtgccgagacgtcaacgagtgtcttcaggag
gactcgtgctccagaggagtctgtgtgaactcccctggctccttctcctgtttgtgtcct
ctgggattctcccccagcgacaacagaacctcctgcatcgatgtggacgagtgtgtggag
tcaagtttgtgcgttgacgggcgctgtgtgaacactgaaggctcctttcagtgccaatgt
gagaccggcttcacctccaacccagaggggaccacctgcctcgacgttgacgagtgcgtc
caatccggcggctcggtgtgcgtgatgtcccagagatgtgagaatacgattggctcatac
cgctgcatcacttcctgtcagccgggttaccaggtgacccggaccggcagctgtgaggac
cttaacgagtgctccaatcagacgctgtgtggacaacacgccttctgtcagaacgtcgtg
gggaccttcctgtgtgtgtgtgaccagggcttcacctcggccgacggcggggggacctgt
gaggacgaggacgagtgtgtgtctcggcccgatgtgtgcggttctgctcgctgtgagaac
gttgagggctccttcatgtgtgagtgcgaccagccgggtcacgagttcgataccagcagc
cggcggtgcgtcaacgcggaccagcaagcagagaggctctctggctcctcctctttccat
ctcagcgtgttggggcccccccccctgctgccccccctcccggcggcgcgccccggcgag
ctgagggagtgttactacaacctggcggaggcggggacctgcagcctgctggccaccaac
acctcccagcaggagtgctgctgcaccgtgggggaggggtgggggctgggctgccagtac
cacggctgcccccccacggactcagtccacttcctgtctctgtgtcccagtgggagggga
tacgtcaccacgggacctggagccttcagctacacagatgtggacgagtgtaagcgcttc
catccagaggtttgtaagaacggagtgtgcgtcaacaacatccccggatacagctgctac
tgccccagtggatacgtgtacaaccacacgctgctggagtgtgtcgatcacgatgagtgt
gaggaggagagctgtgtgggcggagcctgcgtgaacaccgtgggctcttattactgcagc
tgtgctcctcctctgcagctggacgacacacaacgacactgtgtcaactcctcccacctc
cctggggacgagaacctgtccctctgctggcagcacgtcacagcggacctggtgtgtcag
agtcctctcctgggggctcaggtcaccttcatggactgctgctgtctgtacggggagggc
tggggcatggagtgtgccctctgcccccccaccgactccgatgactacgcttccctctgc
acctccttccttcctcctctgtttccggagagcttctcggactctggaccagaacccgga
gtgagaccaggaggacgaggaggagtcagagagtcatctcctccctacttccctccctac
agtcctgactccttccctcctgctgtggcccctgactatgaggactactccccagcaggg
ggcagcagctcggtcttcagagggaggacacctgtctcctatcaggggccagacttcagg
cccccgtccttccgccctccccccgacccgcgggctgagagggcgtttggggctcgtccc
ccccccccgtcccgacccgacgggcctcccatcagcctggcaccactgcccggagctcct
taccaggtggagcaggaggaggagggggaggaggagggatggtggaggcaggccccccct
ttcccccccttcactgagaggagagaaggaggagcaccgaggaggctctatgagaggcgc
tatgagtcgtacgcgggcctgagtgcagcagaggattgtgggatactgcacggctgtgag
aacggaaggtgtattcgcgttgctgagggttacacgtgtgactgttaccaaggatacggg
ctggacatgacctccatgacatgtacagaccttaacgagtgcgaggcctccgtcccgctg
gacttcccctgtgtgaacgctcgctgtgtgaacacagctggttcgttccgatgcgtctgc
aggagaggctacgtcatgtcccgcaggcccaaccactgcgtggctgcctaa
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