Pungitius pungitius (ninespine stickleback): 119211515
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Entry
119211515 CDS
T07626
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase PUS7L isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119211515 (pus7l)
Enzymes [BR:
ppug01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
119211515 (pus7l)
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
119211515 (pus7l)
Prokaryotic type
119211515 (pus7l)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
119211515
NCBI-ProteinID:
XP_037318380
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All DBs
Position
2:6672106..6677028
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AA seq
683 aa
AA seq
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MKQDSDAVNIPECFISNHEGFLGSIKNAIKDFVVTEIDITGRRVNTAAATPPPDCASPDR
KEVASAECKWKNHSSVALDTDVAADCGLDVTIPSPGSFDLSVILGQSVSEELEQFVLTLK
EKPTKQELSLGSFADKHHRANVHRAVRHRFPFLMTVTIQPEIRVREDPDYRELSHLVTED
EAEDFFRFIDAKVRGSSYTFGPDDDKEHRTAVHHFLSRRFGKLVETKSFTDQGTTAISVR
LREQGRPKKRTAEERKEEDVYTAFTLRKENLETLEAISYMAAALGVLPSDFTYAGIKDKR
AITYQSMVVKKVSTQRLKEKTAEFEKRGMRLSQVRSVGEPLRLGRLQGNHFDLVVRDLRP
QGAADGHSSGADSHARLAALVKEAVENVKARGFVNYYGPQRFGSVKSVQSDRVGLALLKE
DMASAVRLFFTPDDGNDPQNYAKRHFLQTDNAKESLALMPLSKARERLMLRALNRYGTGP
DGCTQAWLSLPHSTRVFYPHAYCSRVWNEAVAHRLTTLGHSARRGDLVWRREDTGETSSP
QIHVVTDQEEHEGVYTLGHVLLPMLGNTVKYPENAMATWFQERLARDGLDACRFRVSGLK
LNLPGCYRPLLASPSNLGYQLQRAACGEGGGEVTANSSRNSDRQQNGSAAEGKRDSLTLT
LNFDLDSSCYATICLREIMKCDP
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggacagtgatgctgtgaacatccctgagtgcttcatatcaaaccatgaaggt
ttcctcggaagcatcaaaaacgccatcaaagactttgtggtgactgagatagacatcact
ggacggcgtgttaacacagcggcggccactccgcctcccgactgtgcctccccggatagg
aaagaggtagccagcgcagaatgtaagtggaaaaatcactcctcggtcgcgctggacacc
gacgtggcagctgattgcgggctggacgtcaccataccgagtccgggcagttttgacttg
agtgtcattttaggccagtcggtcagcgaggagctggagcagtttgtgttgactctgaaa
gaaaagccgaccaagcaggagctatctctcggctccttcgctgacaaacaccacagagcc
aatgtgcaccgggccgtcagacaccgcttccccttcctcatgactgtcactattcagcct
gagatcagggtgagggaggacccagactacagagagctctcccatttggtcacggaggac
gaggcagaggacttcttcaggttcatcgacgccaaagtgcgaggctcgtcctacacgttt
ggacccgatgacgacaaggagcaccgcaccgcggtccaccacttcctcagccggcggttc
ggcaaactggtggagaccaagagcttcaccgaccaggggacgacagcgatctctgttagg
ctgagagagcaggggaggccgaagaagagaaccgcagaggaacgtaaagaagaagacgtt
tacaccgctttcactttgcgtaaggagaacctggagactctggaggccatcagctacatg
gcagctgctctcggcgtgctgccatcagatttcacttacgctgggatcaaggataagaga
gccatcacctaccagtccatggtggtcaagaaggtctcgactcaaaggttgaaagagaag
acggcagagttcgagaagagagggatgcgtctttcccaggtccgctcagtcggggagcct
ctcaggctgggacgactgcagggcaaccactttgacctggtggtccgtgacctgagacca
caaggggccgccgacggccactcctctggcgccgactcgcacgctcgcctggcggcgctg
gtaaaggaagcagtggaaaatgtcaaggccagaggttttgtcaactactacggaccacag
aggttcggcagtgtgaagagcgttcagtccgaccgtgtaggcctggctttactcaaagag
gacatggcgagtgctgtgcgtctcttcttcactccagatgacggcaatgatcctcaaaac
tatgcaaagagacacttcctccaaacagacaacgccaaggagtctttagcactgatgccg
ttgtcaaaagccagagagcgactgatgcttcgggccctgaaccgctacggtacgggtccg
gatggttgtacccaagcttggctcagcttgccccacagcacgagagtcttctacccacat
gcctactgtagcagagtgtggaacgaggcagtggcccacaggctgactactctgggccac
agtgccaggcgaggagacctggtgtggaggcgggaagacaccggagaaaccagctcgcct
cagatccacgtggtgacggatcaagaggaacacgagggagtgtacacactgggacatgtc
ttactacccatgctgggaaacactgtgaagtatccagaaaacgccatggcgacttggttc
caggagagactggccagagacggactggacgcgtgtcgcttcagagtcagcggcctcaaa
ctcaatctgcccggctgctaccgccccctgctggcctcgcccagcaatctcggctaccag
ctgcagagagcagcctgtggggagggaggaggagaggtgacggcaaacagcagcagaaat
agtgaccggcagcagaatggcagtgcagcggaaggaaagcgggactcgctcactctcacc
ttaaacttcgacctcgactcctcctgctatgctactatctgcctcagagagatcatgaag
tgtgacccctag
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